RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 HHIPL2Q6UWX4 724 aa18.42■□□□□ 0.54
SEC61A1-207ENST00000498837 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.42■□□□□ 0.54
SEC61A1-207ENST00000498837 PTPRFP10586 1907 aa18.41■□□□□ 0.54
SEC61A1-207ENST00000498837 FGFR2P21802 821 aa18.41■□□□□ 0.54
SEC61A1-207ENST00000498837 PPATQ06203 517 aa18.41■□□□□ 0.54
SEC61A1-207ENST00000498837 DCAF15Q66K64 600 aa18.41■□□□□ 0.54
SEC61A1-207ENST00000498837 C17orf99Q6UX52 265 aa18.41■□□□□ 0.54
SEC61A1-207ENST00000498837 HOOK2Q96ED9 719 aa18.41■□□□□ 0.54
SEC61A1-207ENST00000498837 ZNF341Q9BYN7 854 aa18.41■□□□□ 0.54
SEC61A1-207ENST00000498837 CPA4Q9UI42 421 aa18.41■□□□□ 0.54
SEC61A1-207ENST00000498837 SUGT1Q9Y2Z0 365 aa18.41■□□□□ 0.54
SEC61A1-207ENST00000498837 MAST3O60307 1309 aa18.41■□□□□ 0.54
SEC61A1-207ENST00000498837 RPAP1Q9BWH6 1393 aaPredicted RBP18.41■□□□□ 0.54
SEC61A1-207ENST00000498837 DOCK2Q92608 1830 aa18.4■□□□□ 0.54
SEC61A1-207ENST00000498837 H0YGN5 161 aa18.4■□□□□ 0.54
SEC61A1-207ENST00000498837 GNRH1P01148 92 aa18.4■□□□□ 0.54
SEC61A1-207ENST00000498837 MTFR1Q15390 333 aa18.4■□□□□ 0.54
SEC61A1-207ENST00000498837 MRPL50Q8N5N7 158 aaKnown RBP18.4■□□□□ 0.54
SEC61A1-207ENST00000498837 IFIT1P09914 478 aaKnown RBP18.39■□□□□ 0.53
SEC61A1-207ENST00000498837 PSMC4P43686 418 aa18.39■□□□□ 0.53
SEC61A1-207ENST00000498837 TCP10Q12799 353 aa18.39■□□□□ 0.53
SEC61A1-207ENST00000498837 PUM3Q15397 648 aaKnown RBP18.39■□□□□ 0.53
SEC61A1-207ENST00000498837 FAM9BQ8IZU0 186 aa18.39■□□□□ 0.53
SEC61A1-207ENST00000498837 FAM151AQ8WW52 585 aa18.39■□□□□ 0.53
SEC61A1-207ENST00000498837 TRIM47Q96LD4 638 aa18.39■□□□□ 0.53
SEC61A1-207ENST00000498837 USP44Q9H0E7 712 aa18.39■□□□□ 0.53
SEC61A1-207ENST00000498837 PDHXO00330 501 aa18.38■□□□□ 0.53
SEC61A1-207ENST00000498837 ANP32CO43423 234 aa18.38■□□□□ 0.53
SEC61A1-207ENST00000498837 PRMT2P55345 433 aa18.38■□□□□ 0.53
SEC61A1-207ENST00000498837 ANKRD23Q86SG2 305 aa18.38■□□□□ 0.53
SEC61A1-207ENST00000498837 SHISA4Q96DD7 197 aa18.38■□□□□ 0.53
SEC61A1-207ENST00000498837 SRRDQ9UH36 339 aa18.38■□□□□ 0.53
SEC61A1-207ENST00000498837 ZNF112Q9UJU3 913 aa18.38■□□□□ 0.53
SEC61A1-207ENST00000498837 KIF16BQ96L93 1317 aa18.38■□□□□ 0.53
SEC61A1-207ENST00000498837 SZT2Q5T011 3432 aa18.38■□□□□ 0.53
SEC61A1-207ENST00000498837 PHIPQ8WWQ0 1821 aa18.37■□□□□ 0.53
SEC61A1-207ENST00000498837 OSBPP22059 807 aa18.37■□□□□ 0.53
SEC61A1-207ENST00000498837 RFX5P48382 616 aaPredicted RBP18.37■□□□□ 0.53
SEC61A1-207ENST00000498837 MOGSQ13724 837 aa18.37■□□□□ 0.53
SEC61A1-207ENST00000498837 DIXDC1Q155Q3 683 aa18.37■□□□□ 0.53
SEC61A1-207ENST00000498837 CDC42EP5Q6NZY7 148 aa18.37■□□□□ 0.53
SEC61A1-207ENST00000498837 WDR66Q8TBY9 1149 aa18.37■□□□□ 0.53
SEC61A1-207ENST00000498837 KCNH4Q9UQ05 1017 aa18.37■□□□□ 0.53
SEC61A1-207ENST00000498837 DAGLAQ9Y4D2 1042 aa18.37■□□□□ 0.53
SEC61A1-207ENST00000498837 ADGRA2Q96PE1 1338 aa18.37■□□□□ 0.53
SEC61A1-207ENST00000498837 EYA2O00167 538 aa18.36■□□□□ 0.53
SEC61A1-207ENST00000498837 SLC5A1P13866 664 aa18.36■□□□□ 0.53
SEC61A1-207ENST00000498837 NFIAQ12857 509 aa18.36■□□□□ 0.53
SEC61A1-207ENST00000498837 FMNL1O95466 1100 aaPredicted RBP18.35■□□□□ 0.53
SEC61A1-207ENST00000498837 PRDX5P30044 214 aa18.35■□□□□ 0.53
SEC61A1-207ENST00000498837 GRK4P32298 578 aa18.35■□□□□ 0.53
SEC61A1-207ENST00000498837 ZFPM1Q8IX07 1006 aa18.35■□□□□ 0.53
SEC61A1-207ENST00000498837 RAET1EQ8TD07 263 aa18.35■□□□□ 0.53
SEC61A1-207ENST00000498837 LPIN2Q92539 896 aa18.35■□□□□ 0.53
SEC61A1-207ENST00000498837 FAM198AQ9UFP1 575 aa18.35■□□□□ 0.53
SEC61A1-207ENST00000498837 PTPRCP08575 1304 aa18.34■□□□□ 0.53
SEC61A1-207ENST00000498837 ZNF521Q96K83 1311 aa18.34■□□□□ 0.53
SEC61A1-207ENST00000498837 HOXD10P28358 340 aa18.34■□□□□ 0.53
SEC61A1-207ENST00000498837 ZEB1P37275 1124 aaPredicted RBP18.34■□□□□ 0.53
SEC61A1-207ENST00000498837 ATG9AQ7Z3C6 839 aa18.34■□□□□ 0.53
SEC61A1-207ENST00000498837 DPF3Q92784 378 aa18.34■□□□□ 0.53
SEC61A1-207ENST00000498837 RANBP2P49792 3224 aaKnown RBP18.34■□□□□ 0.53
SEC61A1-207ENST00000498837 DOCK1Q14185 1865 aa18.33■□□□□ 0.53
SEC61A1-207ENST00000498837 MYPNQ86TC9 1320 aa18.33■□□□□ 0.53
SEC61A1-207ENST00000498837 NOL9Q5SY16 702 aaKnown RBP18.33■□□□□ 0.52
SEC61A1-207ENST00000498837 GPAT2Q6NUI2 795 aa18.33■□□□□ 0.52
SEC61A1-207ENST00000498837 CHRDL2Q6WN34 429 aa18.33■□□□□ 0.52
SEC61A1-207ENST00000498837 SSH1Q8WYL5 1049 aa18.33■□□□□ 0.52
SEC61A1-207ENST00000498837 USP40Q9NVE5 1235 aa18.33■□□□□ 0.52
SEC61A1-207ENST00000498837 ALPK3Q96L96 1907 aa18.32■□□□□ 0.52
SEC61A1-207ENST00000498837 CYP2C8P10632 490 aa18.32■□□□□ 0.52
SEC61A1-207ENST00000498837 BCRP11274 1271 aa18.32■□□□□ 0.52
SEC61A1-207ENST00000498837 CCL5P13501 91 aa18.32■□□□□ 0.52
SEC61A1-207ENST00000498837 SIL1Q9H173 461 aa18.32■□□□□ 0.52
SEC61A1-207ENST00000498837 LDHBP07195 334 aaKnown RBP18.31■□□□□ 0.52
SEC61A1-207ENST00000498837 GJB1P08034 283 aa18.31■□□□□ 0.52
SEC61A1-207ENST00000498837 GJA8P48165 433 aa18.31■□□□□ 0.52
SEC61A1-207ENST00000498837 PRKCZQ05513 592 aa18.31■□□□□ 0.52
SEC61A1-207ENST00000498837 RNF208Q9H0X6 261 aa18.31■□□□□ 0.52
SEC61A1-207ENST00000498837 BIN2Q9UBW5 565 aaPredicted RBP18.31■□□□□ 0.52
SEC61A1-207ENST00000498837 GABRQQ9UN88 632 aa18.31■□□□□ 0.52
SEC61A1-207ENST00000498837 ATAD5Q96QE3 1844 aa18.3■□□□□ 0.52
SEC61A1-207ENST00000498837 PHF20L1A8MW92 1017 aa18.3■□□□□ 0.52
SEC61A1-207ENST00000498837 CXCL11O14625 94 aa18.3■□□□□ 0.52
SEC61A1-207ENST00000498837 ATP2B3Q16720 1220 aa18.3■□□□□ 0.52
SEC61A1-207ENST00000498837 UBE2Q1Q7Z7E8 422 aa18.3■□□□□ 0.52
SEC61A1-207ENST00000498837 NKX2-3Q8TAU0 364 aa18.3■□□□□ 0.52
SEC61A1-207ENST00000498837 PARK7Q99497 189 aaKnown RBP18.3■□□□□ 0.52
SEC61A1-207ENST00000498837 RBM27Q9P2N5 1060 aaKnown RBP18.3■□□□□ 0.52
SEC61A1-207ENST00000498837 ATRNL1Q5VV63 1379 aa18.3■□□□□ 0.52
SEC61A1-207ENST00000498837 SLURP2P0DP57 97 aa18.29■□□□□ 0.52
SEC61A1-207ENST00000498837 PHKA1P46020 1223 aa18.29■□□□□ 0.52
SEC61A1-207ENST00000498837 ZHX2Q9Y6X8 837 aa18.29■□□□□ 0.52
SEC61A1-207ENST00000498837 SALL1Q9NSC2 1324 aa18.28■□□□□ 0.52
SEC61A1-207ENST00000498837 RGS3P49796 1198 aa18.28■□□□□ 0.52
SEC61A1-207ENST00000498837 FCGRTP55899 365 aa18.28■□□□□ 0.52
SEC61A1-207ENST00000498837 UBXN2AP68543 259 aa18.28■□□□□ 0.52
SEC61A1-207ENST00000498837 SH3BP5LQ7L8J4 393 aa18.28■□□□□ 0.52
SEC61A1-207ENST00000498837 GNL3LQ9NVN8 582 aaKnown RBP18.28■□□□□ 0.52
SEC61A1-207ENST00000498837 CEP126Q9P2H0 1117 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms