RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ZNF213O14771 459 aa9.56□□□□□ -0.88
PDZRN3-212ENST00000498048 BBOX1O75936 387 aa9.56□□□□□ -0.88
PDZRN3-212ENST00000498048 FGAP02671 866 aa9.56□□□□□ -0.88
PDZRN3-212ENST00000498048 SRGNP10124 158 aa9.56□□□□□ -0.88
PDZRN3-212ENST00000498048 TXNRD3Q86VQ6 643 aa9.56□□□□□ -0.88
PDZRN3-212ENST00000498048 TBC1D10CQ8IV04 446 aa9.56□□□□□ -0.88
PDZRN3-212ENST00000498048 MASTLQ96GX5 879 aa9.56□□□□□ -0.88
PDZRN3-212ENST00000498048 STRBPQ96SI9 672 aaKnown RBP9.56□□□□□ -0.88
PDZRN3-212ENST00000498048 LRRC2Q9BYS8 371 aa9.56□□□□□ -0.88
PDZRN3-212ENST00000498048 NACAP1Q9BZK3 213 aa9.56□□□□□ -0.88
PDZRN3-212ENST00000498048 PODXL2Q9NZ53 605 aa9.56□□□□□ -0.88
PDZRN3-212ENST00000498048 TPCN1Q9ULQ1 816 aa9.56□□□□□ -0.88
PDZRN3-212ENST00000498048 SMC3Q9UQE7 1217 aa9.56□□□□□ -0.88
PDZRN3-212ENST00000498048 JAG2Q9Y219 1238 aa9.56□□□□□ -0.88
PDZRN3-212ENST00000498048 SLC4A4Q9Y6R1 1079 aa9.56□□□□□ -0.88
PDZRN3-212ENST00000498048 NEDD4P46934 1319 aa9.56□□□□□ -0.88
PDZRN3-212ENST00000498048 WDR19Q8NEZ3 1342 aa9.56□□□□□ -0.88
PDZRN3-212ENST00000498048 C6orf229H3BNL8 230 aa9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 PRDX5P30044 214 aa9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 MCM4P33991 863 aa9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 ST3GAL1Q11201 340 aa9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 TRDNQ13061 729 aa9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 PKP1Q13835 747 aa9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 ALX1Q15699 326 aa9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 ME3Q16798 604 aa9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 SPTY2D1Q68D10 685 aaPredicted RBP9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 TMED8Q6PL24 325 aaPredicted RBP9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 DHX32Q7L7V1 743 aaKnown RBP9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 DEFB132Q7Z7B7 95 aa9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 ADGRA1Q86SQ6 560 aa9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 C2CD5Q86YS7 1000 aa9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 MB21D2Q8IYB1 491 aaPredicted RBP9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 NCOA7Q8NI08 942 aa9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 WDR66Q8TBY9 1149 aa9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 BRF1Q92994 677 aa9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 GTF3C6Q969F1 213 aa9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 NBPF3Q9H094 633 aa9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 ATP6V0A2Q9Y487 856 aa9.55□□□□□ -0.88
PDZRN3-212ENST00000498048 GOLGA6L22H0YM25 854 aa9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 PRC1O43663 620 aa9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 LDHBP07195 334 aaKnown RBP9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 PYGBP11216 843 aa9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 PTMSP20962 102 aa9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 ALDH1B1P30837 517 aa9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 MCM5P33992 734 aa9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 MECOMQ03112 1051 aa9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 STK3Q13188 491 aa9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 SP8Q8IXZ3 490 aa9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 IFNL3Q8IZI9 196 aa9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 NECAB1Q8N987 351 aa9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 TDRD7Q8NHU6 1098 aaKnown RBP9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 TBC1D16Q8TBP0 767 aa9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 ZNF622Q969S3 477 aaKnown RBP eCLIP9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 NSUN4Q96CB9 384 aaKnown RBP9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 TMX4Q9H1E5 349 aaPredicted RBP9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 SNED1Q8TER0 1413 aa9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 WDR33Q9C0J8 1336 aaKnown RBP9.54□□□□□ -0.88
PDZRN3-212ENST00000498048 GSG1L2A8MUP6 293 aa9.53□□□□□ -0.88
PDZRN3-212ENST00000498048 PATL2C9JE40 543 aaKnown RBP9.53□□□□□ -0.88
PDZRN3-212ENST00000498048 IGSF3O75054 1194 aa9.53□□□□□ -0.88
PDZRN3-212ENST00000498048 GJB2P29033 226 aa9.53□□□□□ -0.88
PDZRN3-212ENST00000498048 DYNLL1P63167 89 aaKnown RBP9.53□□□□□ -0.88
PDZRN3-212ENST00000498048 GSTO1P78417 241 aa9.53□□□□□ -0.88
PDZRN3-212ENST00000498048 APOBRQ0VD83 1088 aa9.53□□□□□ -0.88
PDZRN3-212ENST00000498048 STYK1Q6J9G0 422 aa9.53□□□□□ -0.88
PDZRN3-212ENST00000498048 DPP8Q6V1X1 898 aaPredicted RBP9.53□□□□□ -0.88
PDZRN3-212ENST00000498048 SDR42E1Q8WUS8 393 aa9.53□□□□□ -0.88
PDZRN3-212ENST00000498048 RIOK1Q9BRS2 568 aaKnown RBP9.53□□□□□ -0.88
PDZRN3-212ENST00000498048 NOL10Q9BSC4 688 aaKnown RBP9.53□□□□□ -0.88
PDZRN3-212ENST00000498048 CRNKL1Q9BZJ0 848 aaKnown RBP9.53□□□□□ -0.88
PDZRN3-212ENST00000498048 CD209Q9NNX6 404 aa9.53□□□□□ -0.88
PDZRN3-212ENST00000498048 POLLQ9UGP5 575 aa9.53□□□□□ -0.88
PDZRN3-212ENST00000498048 NAP1L2Q9ULW6 460 aaPredicted RBP9.53□□□□□ -0.88
PDZRN3-212ENST00000498048 MROH7-TTC4A0A0A0MT08 1334 aa9.53□□□□□ -0.88
PDZRN3-212ENST00000498048 GOLGA8BA8MQT2 603 aa9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 B4E1Z4 1266 aa9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 H0YIN7 160 aa9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 PRKAB2O43741 272 aa9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 BAG4O95429 457 aaKnown RBP9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 BRD1O95696 1058 aa9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 IL1R1P14778 569 aa9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 ANTXR2P58335 489 aa9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 EXOSC10Q01780 885 aaKnown RBP9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 CTDSPL2Q05D32 466 aa9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 FOXD4L5Q5VV16 416 aaPredicted RBP9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 CHST3Q7LGC8 479 aa9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 MPNDQ8N594 471 aa9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 ZNF384Q8TF68 577 aa9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 STAG1Q8WVM7 1258 aa9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 FOXD4L4Q8WXT5 416 aaPredicted RBP9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 FBXW7Q969H0 707 aa9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 EYA3Q99504 573 aa9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 AGXT2Q9BYV1 514 aa9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 CNNM2Q9H8M5 875 aa9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 AATFQ9NY61 560 aaKnown RBP eCLIP9.52□□□□□ -0.89
PDZRN3-212ENST00000498048 VPS37CA5D8V6 355 aaPredicted RBP9.51□□□□□ -0.89
PDZRN3-212ENST00000498048 PFKFB2O60825 505 aa9.51□□□□□ -0.89
PDZRN3-212ENST00000498048 CD44P16070 742 aaKnown RBP9.51□□□□□ -0.89
PDZRN3-212ENST00000498048 PPARAQ07869 468 aa9.51□□□□□ -0.89
PDZRN3-212ENST00000498048 MFSD14BQ5SR56 506 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 308.9 ms