RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 SCARA3Q6AZY7 606 aa7.76□□□□□ -1.17
VPS36-206ENST00000497149 MPRIPQ6WCQ1 1025 aa7.76□□□□□ -1.17
VPS36-206ENST00000497149 KCNB2Q92953 911 aa7.76□□□□□ -1.17
VPS36-206ENST00000497149 ACBD3Q9H3P7 528 aa7.76□□□□□ -1.17
VPS36-206ENST00000497149 CCSER2Q9H7U1 834 aa7.76□□□□□ -1.17
VPS36-206ENST00000497149 CACNA2D2Q9NY47 1150 aa7.76□□□□□ -1.17
VPS36-206ENST00000497149 ADAMTS1Q9UHI8 967 aa7.76□□□□□ -1.17
VPS36-206ENST00000497149 DLGAP3O95886 979 aa7.75□□□□□ -1.17
VPS36-206ENST00000497149 COL8A1P27658 744 aa7.75□□□□□ -1.17
VPS36-206ENST00000497149 FAM160A1Q05DH4 1040 aa7.75□□□□□ -1.17
VPS36-206ENST00000497149 GRIK4Q16099 956 aa7.75□□□□□ -1.17
VPS36-206ENST00000497149 DUOXA2Q1HG44 320 aa7.75□□□□□ -1.17
VPS36-206ENST00000497149 FBXL19Q6PCT2 694 aa7.75□□□□□ -1.17
VPS36-206ENST00000497149 CCDC84Q86UT8 332 aaPredicted RBP7.75□□□□□ -1.17
VPS36-206ENST00000497149 TRIM42Q8IWZ5 723 aa7.75□□□□□ -1.17
VPS36-206ENST00000497149 ZNF296Q8WUU4 475 aaPredicted RBP7.75□□□□□ -1.17
VPS36-206ENST00000497149 CCDC86Q9H6F5 360 aaKnown RBP7.75□□□□□ -1.17
VPS36-206ENST00000497149 KCNQ5Q9NR82 932 aa7.75□□□□□ -1.17
VPS36-206ENST00000497149 KRT82Q9NSB4 513 aa7.75□□□□□ -1.17
VPS36-206ENST00000497149 MSTNO14793 375 aa7.74□□□□□ -1.17
VPS36-206ENST00000497149 GREM1O60565 184 aa7.74□□□□□ -1.17
VPS36-206ENST00000497149 TRIM37O94972 964 aa7.74□□□□□ -1.17
VPS36-206ENST00000497149 SPATA31C1P0DKV0 1188 aa7.74□□□□□ -1.17
VPS36-206ENST00000497149 GARTP22102 1010 aa7.74□□□□□ -1.17
VPS36-206ENST00000497149 ZC3H6P61129 1189 aaKnown RBP7.74□□□□□ -1.17
VPS36-206ENST00000497149 GOLM1Q8NBJ4 401 aa7.74□□□□□ -1.17
VPS36-206ENST00000497149 UBASH3BQ8TF42 649 aa7.74□□□□□ -1.17
VPS36-206ENST00000497149 SPON2Q9BUD6 331 aa7.74□□□□□ -1.17
VPS36-206ENST00000497149 MIR1-1HGQ9H1L0 117 aa7.74□□□□□ -1.17
VPS36-206ENST00000497149 WISP1O95388 367 aa7.73□□□□□ -1.17
VPS36-206ENST00000497149 TNNI2P48788 182 aa7.73□□□□□ -1.17
VPS36-206ENST00000497149 PTPN11Q06124 597 aaPredicted RBP7.73□□□□□ -1.17
VPS36-206ENST00000497149 PDE3AQ14432 1141 aa7.73□□□□□ -1.17
VPS36-206ENST00000497149 EXOSC6Q5RKV6 272 aaKnown RBP7.73□□□□□ -1.17
VPS36-206ENST00000497149 SNAP47Q5SQN1 464 aa7.73□□□□□ -1.17
VPS36-206ENST00000497149 HP1BP3Q5SSJ5 553 aaPredicted RBP7.73□□□□□ -1.17
VPS36-206ENST00000497149 SHISA2Q6UWI4 295 aa7.73□□□□□ -1.17
VPS36-206ENST00000497149 KIAA1211Q6ZU35 1233 aa7.73□□□□□ -1.17
VPS36-206ENST00000497149 KIAA0825Q8IV33 1275 aa7.73□□□□□ -1.17
VPS36-206ENST00000497149 JARID2Q92833 1246 aaPredicted RBP7.73□□□□□ -1.17
VPS36-206ENST00000497149 C8orf37Q96NL8 207 aa7.73□□□□□ -1.17
VPS36-206ENST00000497149 MRPL18Q9H0U6 180 aaKnown RBP7.73□□□□□ -1.17
VPS36-206ENST00000497149 SUPT16HQ9Y5B9 1047 aaKnown RBP7.73□□□□□ -1.17
VPS36-206ENST00000497149 MEGF11A6BM72 1044 aa7.72□□□□□ -1.17
VPS36-206ENST00000497149 ZNF862O60290 1169 aa7.72□□□□□ -1.17
VPS36-206ENST00000497149 ITGB2P05107 769 aa7.72□□□□□ -1.17
VPS36-206ENST00000497149 SELPP16109 830 aa7.72□□□□□ -1.17
VPS36-206ENST00000497149 LIG1P18858 919 aa7.72□□□□□ -1.17
VPS36-206ENST00000497149 SEPT6Q14141 434 aa7.72□□□□□ -1.17
VPS36-206ENST00000497149 BNC2Q6ZN30 1099 aaPredicted RBP7.72□□□□□ -1.17
VPS36-206ENST00000497149 TMEM130Q8N3G9 435 aa7.72□□□□□ -1.17
VPS36-206ENST00000497149 GPBAR1Q8TDU6 330 aa7.72□□□□□ -1.17
VPS36-206ENST00000497149 GAL3ST3Q96A11 431 aa7.72□□□□□ -1.17
VPS36-206ENST00000497149 WDR89Q96FK6 387 aaPredicted RBP7.72□□□□□ -1.17
VPS36-206ENST00000497149 SPOCK3Q9BQ16 436 aa7.72□□□□□ -1.17
VPS36-206ENST00000497149 FAM221AA4D161 298 aa7.71□□□□□ -1.18
VPS36-206ENST00000497149 F13A1P00488 732 aa7.71□□□□□ -1.18
VPS36-206ENST00000497149 PROCP04070 461 aa7.71□□□□□ -1.18
VPS36-206ENST00000497149 PAK2Q13177 524 aa7.71□□□□□ -1.18
VPS36-206ENST00000497149 NAALADL2Q58DX5 795 aa7.71□□□□□ -1.18
VPS36-206ENST00000497149 ACAD11Q709F0 780 aa7.71□□□□□ -1.18
VPS36-206ENST00000497149 GATAD2BQ8WXI9 593 aa7.71□□□□□ -1.18
VPS36-206ENST00000497149 LENG1Q96BZ8 264 aaPredicted RBP7.71□□□□□ -1.18
VPS36-206ENST00000497149 ACSBG1Q96GR2 724 aa7.71□□□□□ -1.18
VPS36-206ENST00000497149 EAF1Q96JC9 268 aaPredicted RBP7.71□□□□□ -1.18
VPS36-206ENST00000497149 RUSC1Q9BVN2 902 aa7.71□□□□□ -1.18
VPS36-206ENST00000497149 NT5C1AQ9BXI3 368 aa7.71□□□□□ -1.18
VPS36-206ENST00000497149 TMPRSS13Q9BYE2 586 aa7.71□□□□□ -1.18
VPS36-206ENST00000497149 CAPN10Q9HC96 672 aa7.71□□□□□ -1.18
VPS36-206ENST00000497149 INPP5FQ9Y2H2 1132 aa7.71□□□□□ -1.18
VPS36-206ENST00000497149 ROBO2Q9HCK4 1378 aa7.71□□□□□ -1.18
VPS36-206ENST00000497149 AOC2O75106 756 aa7.7□□□□□ -1.18
VPS36-206ENST00000497149 HNRNPUQ00839 825 aaKnown RBP eCLIP7.7□□□□□ -1.18
VPS36-206ENST00000497149 KIF4BQ2VIQ3 1234 aa7.7□□□□□ -1.18
VPS36-206ENST00000497149 FAM196AQ6ZSG2 479 aa7.7□□□□□ -1.18
VPS36-206ENST00000497149 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.7□□□□□ -1.18
VPS36-206ENST00000497149 TINF2Q9BSI4 451 aa7.7□□□□□ -1.18
VPS36-206ENST00000497149 WDR18Q9BV38 432 aa7.7□□□□□ -1.18
VPS36-206ENST00000497149 RNF208Q9H0X6 261 aa7.7□□□□□ -1.18
VPS36-206ENST00000497149 RAD18Q9NS91 495 aa7.7□□□□□ -1.18
VPS36-206ENST00000497149 PCDHA4Q9UN74 947 aa7.7□□□□□ -1.18
VPS36-206ENST00000497149 SYNGAP1Q96PV0 1343 aa7.7□□□□□ -1.18
VPS36-206ENST00000497149 C9orf172C9J069 976 aa7.69□□□□□ -1.18
VPS36-206ENST00000497149 F8W735 103 aaPredicted RBP7.69□□□□□ -1.18
VPS36-206ENST00000497149 CILPO75339 1184 aa7.69□□□□□ -1.18
VPS36-206ENST00000497149 SLFN14P0C7P3 912 aa7.69□□□□□ -1.18
VPS36-206ENST00000497149 GJA8P48165 433 aa7.69□□□□□ -1.18
VPS36-206ENST00000497149 GNL2Q13823 731 aaKnown RBP7.69□□□□□ -1.18
VPS36-206ENST00000497149 NUTM2GQ5VZR2 741 aa7.69□□□□□ -1.18
VPS36-206ENST00000497149 DIEXFQ68CQ4 756 aaKnown RBP7.69□□□□□ -1.18
VPS36-206ENST00000497149 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.69□□□□□ -1.18
VPS36-206ENST00000497149 UBP1Q9NZI7 540 aa7.69□□□□□ -1.18
VPS36-206ENST00000497149 USP21Q9UK80 565 aa7.69□□□□□ -1.18
VPS36-206ENST00000497149 APBA3O96018 575 aa7.68□□□□□ -1.18
VPS36-206ENST00000497149 NRG1Q02297 640 aaPredicted RBP7.68□□□□□ -1.18
VPS36-206ENST00000497149 SLC43A3Q8NBI5 491 aa7.68□□□□□ -1.18
VPS36-206ENST00000497149 SMG8Q8ND04 991 aaKnown RBP7.68□□□□□ -1.18
VPS36-206ENST00000497149 FBXO27Q8NI29 283 aa7.68□□□□□ -1.18
VPS36-206ENST00000497149 GPRASP2Q96D09 838 aa7.68□□□□□ -1.18
VPS36-206ENST00000497149 NACC1Q96RE7 527 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms