RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 ZBTB43O43298 467 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 SRGNP10124 158 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 MECOMQ03112 1051 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 SH2D4AQ9H788 454 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 SH2B1Q9NRF2 756 aaPredicted RBP11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 TMOD4Q9NZQ9 345 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 CSADQ9Y600 493 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 SLC10A5Q5PT55 438 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 USP48Q86UV5 1035 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 CREBRFQ8IUR6 639 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 ARPP21Q9UBL0 812 aaPredicted RBP11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 A0A0D9SFI3 127 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 DYNLL1P63167 89 aaKnown RBP11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 CFAP100Q494V2 611 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 ATG9AQ7Z3C6 839 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 ARHGEF10LQ9HCE6 1279 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 NOL7Q9UMY1 257 aaKnown RBP11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 FAM208AQ9UK61 1670 aaKnown RBP11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 SGSM2O43147 1006 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 GSPT1P15170 499 aaKnown RBP11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 UBE3CQ15386 1083 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 DCAF15Q66K64 600 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 FHDC1Q9C0D6 1143 aaPredicted RBP11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 PIH1D3Q9NQM4 214 aaKnown RBP11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 ZNRF3Q9ULT6 936 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 MYO3BQ8WXR4 1341 aa11.03□□□□□ -0.64
GAPVD1-219ENST00000495955 FAM84BQ96KN1 310 aaPredicted RBP11.03□□□□□ -0.64
GAPVD1-219ENST00000495955 NLRP5P59047 1200 aa11.03□□□□□ -0.64
GAPVD1-219ENST00000495955 SLC26A6Q9BXS9 759 aa11.03□□□□□ -0.64
GAPVD1-219ENST00000495955 STAP2Q9UGK3 403 aa11.03□□□□□ -0.64
GAPVD1-219ENST00000495955 PPP1R12BO60237 982 aaPredicted RBP11.03□□□□□ -0.64
GAPVD1-219ENST00000495955 PPARAQ07869 468 aa11.03□□□□□ -0.64
GAPVD1-219ENST00000495955 IFNL3Q8IZI9 196 aa11.03□□□□□ -0.64
GAPVD1-219ENST00000495955 ZNF396Q96N95 335 aaPredicted RBP11.03□□□□□ -0.64
GAPVD1-219ENST00000495955 CD2APQ9Y5K6 639 aa11.03□□□□□ -0.64
GAPVD1-219ENST00000495955 RTN1Q16799 776 aa11.02□□□□□ -0.64
GAPVD1-219ENST00000495955 OLFM4Q6UX06 510 aa11.02□□□□□ -0.64
GAPVD1-219ENST00000495955 PTMAP06454 111 aaKnown RBP11.02□□□□□ -0.65
GAPVD1-219ENST00000495955 PRDX5P30044 214 aa11.02□□□□□ -0.65
GAPVD1-219ENST00000495955 GUCY1B3Q02153 619 aa11.02□□□□□ -0.65
GAPVD1-219ENST00000495955 CSRNP1Q96S65 589 aa11.02□□□□□ -0.65
GAPVD1-219ENST00000495955 UTYO14607 1347 aa11.02□□□□□ -0.65
GAPVD1-219ENST00000495955 CRKP46108 304 aa11.02□□□□□ -0.65
GAPVD1-219ENST00000495955 C3orf67Q6ZVT6 689 aa11.02□□□□□ -0.65
GAPVD1-219ENST00000495955 AKT1S1Q96B36 256 aa11.02□□□□□ -0.65
GAPVD1-219ENST00000495955 CDK5RAP3Q96JB5 506 aa11.02□□□□□ -0.65
GAPVD1-219ENST00000495955 SLC27A2O14975 620 aa11.02□□□□□ -0.65
GAPVD1-219ENST00000495955 STK38Q15208 465 aa11.02□□□□□ -0.65
GAPVD1-219ENST00000495955 RTL9Q8NET4 1388 aa11.01□□□□□ -0.65
GAPVD1-219ENST00000495955 MYCNP04198 464 aaPredicted RBP11.01□□□□□ -0.65
GAPVD1-219ENST00000495955 ADD2P35612 726 aa11.01□□□□□ -0.65
GAPVD1-219ENST00000495955 FAM47AQ5JRC9 791 aa11.01□□□□□ -0.65
GAPVD1-219ENST00000495955 C8orf76Q96K31 380 aa11.01□□□□□ -0.65
GAPVD1-219ENST00000495955 TANGO6Q9C0B7 1094 aa11.01□□□□□ -0.65
GAPVD1-219ENST00000495955 DDX11L8A8MPP1 907 aa11.01□□□□□ -0.65
GAPVD1-219ENST00000495955 RGL2O15211 777 aa11.01□□□□□ -0.65
GAPVD1-219ENST00000495955 ANAPC15P60006 121 aa11.01□□□□□ -0.65
GAPVD1-219ENST00000495955 ABCC12Q96J65 1359 aa11.01□□□□□ -0.65
GAPVD1-219ENST00000495955 DHX32Q7L7V1 743 aaKnown RBP11.01□□□□□ -0.65
GAPVD1-219ENST00000495955 MRC1P22897 1456 aa11.01□□□□□ -0.65
GAPVD1-219ENST00000495955 GNAQP50148 359 aa11.01□□□□□ -0.65
GAPVD1-219ENST00000495955 CCDC12Q8WUD4 166 aaPredicted RBP11.01□□□□□ -0.65
GAPVD1-219ENST00000495955 CCDC47Q96A33 483 aaKnown RBP11.01□□□□□ -0.65
GAPVD1-219ENST00000495955 DSCC1Q9BVC3 393 aa11.01□□□□□ -0.65
GAPVD1-219ENST00000495955 BCL2L12Q9HB09 334 aa11.01□□□□□ -0.65
GAPVD1-219ENST00000495955 DDX49Q9Y6V7 483 aaKnown RBP11.01□□□□□ -0.65
GAPVD1-219ENST00000495955 RXRAP19793 462 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 CACNB3P54284 484 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 TFAP4Q01664 338 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 SUPT20HL1Q3ZLR7 823 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 M0R2C6 588 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 CALM1P0DP23 149 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 CALM2P0DP24 149 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 CALM3P0DP25 149 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 C8orf34Q49A92 452 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 NECAB1Q8N987 351 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 USP26Q9BXU7 913 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 CYP2E1P05181 493 aaPredicted RBP11□□□□□ -0.65
GAPVD1-219ENST00000495955 LMNB1P20700 586 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 APOBRQ0VD83 1088 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 CERKLQ49MI3 558 aaPredicted RBP11□□□□□ -0.65
GAPVD1-219ENST00000495955 CCDC73Q6ZRK6 1079 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 HEATR3Q7Z4Q2 680 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 LCORLQ8N3X6 602 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 GPCPD1Q9NPB8 672 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 PARP1P09874 1014 aaKnown RBP11□□□□□ -0.65
GAPVD1-219ENST00000495955 HSPD1P10809 573 aaKnown RBP11□□□□□ -0.65
GAPVD1-219ENST00000495955 HMGN5P82970 282 aaKnown RBP11□□□□□ -0.65
GAPVD1-219ENST00000495955 TBC1D32Q96NH3 1257 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 EHMT1Q9H9B1 1298 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 ORC3Q9UBD5 711 aaPredicted RBP11□□□□□ -0.65
GAPVD1-219ENST00000495955 PALD1Q9ULE6 856 aa11□□□□□ -0.65
GAPVD1-219ENST00000495955 WDR33Q9C0J8 1336 aaKnown RBP11□□□□□ -0.65
GAPVD1-219ENST00000495955 IQCA1LA6NCM1 817 aa10.99□□□□□ -0.65
GAPVD1-219ENST00000495955 RASSF7Q02833 373 aa10.99□□□□□ -0.65
GAPVD1-219ENST00000495955 BEGAINQ9BUH8 593 aa10.99□□□□□ -0.65
GAPVD1-219ENST00000495955 TDRD3Q9H7E2 651 aaKnown RBP10.99□□□□□ -0.65
GAPVD1-219ENST00000495955 ATP8A2Q9NTI2 1148 aa10.99□□□□□ -0.65
GAPVD1-219ENST00000495955 TM4SF1P30408 202 aa10.99□□□□□ -0.65
GAPVD1-219ENST00000495955 TXLNAP40222 546 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms