RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 MYD88Q99836 296 aa18.89■□□□□ 0.61
CHMP2B-205ENST00000494980 HMX1Q9NP08 348 aaPredicted RBP18.89■□□□□ 0.61
CHMP2B-205ENST00000494980 XIRP2A4UGR9 3374 aa18.89■□□□□ 0.61
CHMP2B-205ENST00000494980 TRIM32Q13049 653 aa18.88■□□□□ 0.61
CHMP2B-205ENST00000494980 DZIP1LQ8IYY4 767 aaKnown RBP18.88■□□□□ 0.61
CHMP2B-205ENST00000494980 CCDC191Q8NCU4 936 aa18.88■□□□□ 0.61
CHMP2B-205ENST00000494980 ANKRD2Q9GZV1 360 aa18.88■□□□□ 0.61
CHMP2B-205ENST00000494980 COL6A1P12109 1028 aa18.87■□□□□ 0.61
CHMP2B-205ENST00000494980 GPAT2Q6NUI2 795 aa18.87■□□□□ 0.61
CHMP2B-205ENST00000494980 ALYREFQ86V81 257 aaKnown RBP18.87■□□□□ 0.61
CHMP2B-205ENST00000494980 TTLL11Q8NHH1 800 aa18.87■□□□□ 0.61
CHMP2B-205ENST00000494980 CWC25Q9NXE8 425 aaPredicted RBP18.87■□□□□ 0.61
CHMP2B-205ENST00000494980 DBF4Q9UBU7 674 aaPredicted RBP18.87■□□□□ 0.61
CHMP2B-205ENST00000494980 TCF20Q9UGU0 1960 aaKnown RBP18.87■□□□□ 0.61
CHMP2B-205ENST00000494980 SERPINA10Q9UK55 444 aa18.87■□□□□ 0.61
CHMP2B-205ENST00000494980 SNAP23O00161 211 aa18.86■□□□□ 0.61
CHMP2B-205ENST00000494980 INPP5BP32019 993 aa18.86■□□□□ 0.61
CHMP2B-205ENST00000494980 IGHMBP2P38935 993 aaKnown RBP18.86■□□□□ 0.61
CHMP2B-205ENST00000494980 SMAD3P84022 425 aaKnown RBP18.86■□□□□ 0.61
CHMP2B-205ENST00000494980 SHHQ15465 462 aa18.86■□□□□ 0.61
CHMP2B-205ENST00000494980 ATXN2LQ8WWM7 1075 aaKnown RBP18.86■□□□□ 0.61
CHMP2B-205ENST00000494980 COA7Q96BR5 231 aa18.86■□□□□ 0.61
CHMP2B-205ENST00000494980 ASB2Q96Q27 587 aa18.86■□□□□ 0.61
CHMP2B-205ENST00000494980 PLEKHF1Q96S99 279 aa18.86■□□□□ 0.61
CHMP2B-205ENST00000494980 BABAM1Q9NWV8 329 aa18.86■□□□□ 0.61
CHMP2B-205ENST00000494980 TTF2Q9UNY4 1162 aaKnown RBP18.86■□□□□ 0.61
CHMP2B-205ENST00000494980 REV3LO60673 3130 aa18.86■□□□□ 0.61
CHMP2B-205ENST00000494980 PTPRFP10586 1907 aa18.85■□□□□ 0.61
CHMP2B-205ENST00000494980 IL1R1P14778 569 aa18.85■□□□□ 0.61
CHMP2B-205ENST00000494980 CACNB3P54284 484 aa18.85■□□□□ 0.61
CHMP2B-205ENST00000494980 GOLGA2Q08379 1002 aa18.85■□□□□ 0.61
CHMP2B-205ENST00000494980 C9orf50Q5SZB4 431 aa18.85■□□□□ 0.61
CHMP2B-205ENST00000494980 HYPKQ9NX55 129 aa18.85■□□□□ 0.61
CHMP2B-205ENST00000494980 TIMELESSQ9UNS1 1208 aa18.85■□□□□ 0.61
CHMP2B-205ENST00000494980 ZNF804AQ7Z570 1209 aa18.84■□□□□ 0.61
CHMP2B-205ENST00000494980 THEGQ9P2T0 379 aa18.84■□□□□ 0.61
CHMP2B-205ENST00000494980 FRMPD3Q5JV73 1810 aa18.84■□□□□ 0.61
CHMP2B-205ENST00000494980 CHD9Q3L8U1 2897 aa18.83■□□□□ 0.6
CHMP2B-205ENST00000494980 PPP2R1AP30153 589 aa18.82■□□□□ 0.6
CHMP2B-205ENST00000494980 CHRNDQ07001 517 aa18.82■□□□□ 0.6
CHMP2B-205ENST00000494980 DCAF15Q66K64 600 aa18.82■□□□□ 0.6
CHMP2B-205ENST00000494980 HOOK2Q96ED9 719 aa18.82■□□□□ 0.6
CHMP2B-205ENST00000494980 ZNF341Q9BYN7 854 aa18.82■□□□□ 0.6
CHMP2B-205ENST00000494980 PLXNB2O15031 1838 aa18.81■□□□□ 0.6
CHMP2B-205ENST00000494980 MAPK8IP3Q9UPT6 1336 aa18.81■□□□□ 0.6
CHMP2B-205ENST00000494980 CRKP46108 304 aa18.81■□□□□ 0.6
CHMP2B-205ENST00000494980 GRIN2CQ14957 1233 aa18.81■□□□□ 0.6
CHMP2B-205ENST00000494980 MFSD14BQ5SR56 506 aa18.81■□□□□ 0.6
CHMP2B-205ENST00000494980 MIGA2Q7L4E1 593 aa18.81■□□□□ 0.6
CHMP2B-205ENST00000494980 SMCR8Q8TEV9 937 aaPredicted RBP18.81■□□□□ 0.6
CHMP2B-205ENST00000494980 PPM1EQ8WY54 764 aa18.81■□□□□ 0.6
CHMP2B-205ENST00000494980 MPHOSPH8Q99549 860 aa18.81■□□□□ 0.6
CHMP2B-205ENST00000494980 LRFN3Q9BTN0 628 aa18.81■□□□□ 0.6
CHMP2B-205ENST00000494980 C15orf52Q6ZUT6 534 aaKnown RBP18.8■□□□□ 0.6
CHMP2B-205ENST00000494980 IL27Q8NEV9 243 aa18.8■□□□□ 0.6
CHMP2B-205ENST00000494980 NECAB3Q96P71 396 aaPredicted RBP18.8■□□□□ 0.6
CHMP2B-205ENST00000494980 MRPS5P82675 430 aaKnown RBP18.79■□□□□ 0.6
CHMP2B-205ENST00000494980 PRKAG2Q9UGJ0 569 aa18.79■□□□□ 0.6
CHMP2B-205ENST00000494980 TAF5LO75529 589 aa18.78■□□□□ 0.6
CHMP2B-205ENST00000494980 PRKAR2AP13861 404 aaKnown RBP18.78■□□□□ 0.6
CHMP2B-205ENST00000494980 ANKRD13CQ8N6S4 541 aa18.78■□□□□ 0.6
CHMP2B-205ENST00000494980 CXCL11O14625 94 aa18.77■□□□□ 0.6
CHMP2B-205ENST00000494980 ITGA6P23229 1130 aa18.77■□□□□ 0.6
CHMP2B-205ENST00000494980 GADL1Q6ZQY3 521 aa18.77■□□□□ 0.6
CHMP2B-205ENST00000494980 TRIB2Q92519 343 aa18.77■□□□□ 0.6
CHMP2B-205ENST00000494980 PHAXQ9H814 394 aaKnown RBP18.77■□□□□ 0.6
CHMP2B-205ENST00000494980 RPAP1Q9BWH6 1393 aaPredicted RBP18.77■□□□□ 0.6
CHMP2B-205ENST00000494980 HOXB7P09629 217 aa18.76■□□□□ 0.59
CHMP2B-205ENST00000494980 MAP3K21Q5TCX8 1036 aa18.76■□□□□ 0.59
CHMP2B-205ENST00000494980 FAM83AQ86UY5 434 aa18.76■□□□□ 0.59
CHMP2B-205ENST00000494980 A0A0G2JLL6 359 aaPredicted RBP18.75■□□□□ 0.59
CHMP2B-205ENST00000494980 RIPK4P57078 832 aa18.75■□□□□ 0.59
CHMP2B-205ENST00000494980 NOL9Q5SY16 702 aaKnown RBP18.75■□□□□ 0.59
CHMP2B-205ENST00000494980 FASTKD5Q7L8L6 764 aaKnown RBP18.75■□□□□ 0.59
CHMP2B-205ENST00000494980 PRRT2Q7Z6L0 340 aaPredicted RBP18.75■□□□□ 0.59
CHMP2B-205ENST00000494980 TMOD2Q9NZR1 351 aa18.75■□□□□ 0.59
CHMP2B-205ENST00000494980 SLC45A1Q9Y2W3 748 aa18.75■□□□□ 0.59
CHMP2B-205ENST00000494980 CHD7Q9P2D1 2997 aa18.75■□□□□ 0.59
CHMP2B-205ENST00000494980 WDFY4Q6ZS81 3184 aa18.74■□□□□ 0.59
CHMP2B-205ENST00000494980 POTEEQ6S8J3 1075 aa18.74■□□□□ 0.59
CHMP2B-205ENST00000494980 METTL22Q9BUU2 404 aaPredicted RBP18.74■□□□□ 0.59
CHMP2B-205ENST00000494980 ZNF112Q9UJU3 913 aa18.74■□□□□ 0.59
CHMP2B-205ENST00000494980 GJD2Q9UKL4 321 aa18.74■□□□□ 0.59
CHMP2B-205ENST00000494980 ATN1P54259 1190 aaPredicted RBP18.73■□□□□ 0.59
CHMP2B-205ENST00000494980 FAM110CQ1W6H9 321 aa18.73■□□□□ 0.59
CHMP2B-205ENST00000494980 SENP6Q9GZR1 1112 aaPredicted RBP18.73■□□□□ 0.59
CHMP2B-205ENST00000494980 LAS1LQ9Y4W2 734 aaKnown RBP18.73■□□□□ 0.59
CHMP2B-205ENST00000494980 PHIPQ8WWQ0 1821 aa18.72■□□□□ 0.59
CHMP2B-205ENST00000494980 CHL1O00533 1208 aa18.72■□□□□ 0.59
CHMP2B-205ENST00000494980 PDE3AQ14432 1141 aa18.72■□□□□ 0.59
CHMP2B-205ENST00000494980 GRIK5Q16478 980 aa18.72■□□□□ 0.59
CHMP2B-205ENST00000494980 TMEM31Q5JXX7 168 aa18.72■□□□□ 0.59
CHMP2B-205ENST00000494980 P2RX7Q99572 595 aaKnown RBP18.72■□□□□ 0.59
CHMP2B-205ENST00000494980 EPHX3Q9H6B9 360 aa18.72■□□□□ 0.59
CHMP2B-205ENST00000494980 MRE11P49959 708 aa18.71■□□□□ 0.59
CHMP2B-205ENST00000494980 FKBP1CQ5VVH2 108 aa18.71■□□□□ 0.59
CHMP2B-205ENST00000494980 LHX8Q68G74 356 aa18.71■□□□□ 0.59
CHMP2B-205ENST00000494980 BADQ92934 168 aa18.71■□□□□ 0.59
CHMP2B-205ENST00000494980 RLFQ13129 1914 aa18.7■□□□□ 0.58
CHMP2B-205ENST00000494980 DNAJB2P25686 324 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms