RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 TDRD3Q9H7E2 651 aaKnown RBP9.86□□□□□ -0.83
TM4SF1-204ENST00000493348 ZNF70Q9UC06 446 aaPredicted RBP9.86□□□□□ -0.83
TM4SF1-204ENST00000493348 PGAP2Q9UHJ9 254 aa9.86□□□□□ -0.83
TM4SF1-204ENST00000493348 ABT1Q9ULW3 272 aaKnown RBP9.86□□□□□ -0.83
TM4SF1-204ENST00000493348 PPP2R3BQ9Y5P8 575 aa9.86□□□□□ -0.83
TM4SF1-204ENST00000493348 MROH7-TTC4A0A0A0MT08 1334 aa9.85□□□□□ -0.83
TM4SF1-204ENST00000493348 TMEM88BA6NKF7 163 aa9.85□□□□□ -0.83
TM4SF1-204ENST00000493348 TCP10L2B9ZVM9 353 aa9.85□□□□□ -0.83
TM4SF1-204ENST00000493348 CELF2O95319 508 aaKnown RBP9.85□□□□□ -0.83
TM4SF1-204ENST00000493348 IGHDP01880 384 aa9.85□□□□□ -0.83
TM4SF1-204ENST00000493348 HSPA6P17066 643 aa9.85□□□□□ -0.83
TM4SF1-204ENST00000493348 BTDP43251 543 aa9.85□□□□□ -0.83
TM4SF1-204ENST00000493348 SUPT20HL1Q3ZLR7 823 aa9.85□□□□□ -0.83
TM4SF1-204ENST00000493348 PAXIP1Q6ZW49 1069 aaPredicted RBP9.85□□□□□ -0.83
TM4SF1-204ENST00000493348 CHD1LQ86WJ1 897 aa9.85□□□□□ -0.83
TM4SF1-204ENST00000493348 SMC5Q8IY18 1101 aa9.85□□□□□ -0.83
TM4SF1-204ENST00000493348 NSUN4Q96CB9 384 aaKnown RBP9.85□□□□□ -0.83
TM4SF1-204ENST00000493348 PRMT6Q96LA8 375 aaPredicted RBP9.85□□□□□ -0.83
TM4SF1-204ENST00000493348 HAUS7Q99871 368 aa9.85□□□□□ -0.83
TM4SF1-204ENST00000493348 USP40Q9NVE5 1235 aa9.85□□□□□ -0.83
TM4SF1-204ENST00000493348 DAGLAQ9Y4D2 1042 aa9.85□□□□□ -0.83
TM4SF1-204ENST00000493348 DOCK2Q92608 1830 aa9.84□□□□□ -0.83
TM4SF1-204ENST00000493348 TRIM6-TRIM34B2RNG4 842 aa9.84□□□□□ -0.83
TM4SF1-204ENST00000493348 ADM5C9JUS6 153 aa9.84□□□□□ -0.83
TM4SF1-204ENST00000493348 PPP1R12BO60237 982 aaPredicted RBP9.84□□□□□ -0.83
TM4SF1-204ENST00000493348 MAP4K4O95819 1239 aaPredicted RBP9.84□□□□□ -0.83
TM4SF1-204ENST00000493348 CYP7A1P22680 504 aa9.84□□□□□ -0.83
TM4SF1-204ENST00000493348 NUCB1Q02818 461 aa9.84□□□□□ -0.83
TM4SF1-204ENST00000493348 GRIK5Q16478 980 aa9.84□□□□□ -0.83
TM4SF1-204ENST00000493348 SPDYE2Q495Y8 402 aa9.84□□□□□ -0.83
TM4SF1-204ENST00000493348 SLC9C2Q5TAH2 1124 aa9.84□□□□□ -0.83
TM4SF1-204ENST00000493348 ERICH6BQ5W0A0 696 aa9.84□□□□□ -0.83
TM4SF1-204ENST00000493348 ZSCAN29Q8IWY8 852 aaPredicted RBP9.84□□□□□ -0.83
TM4SF1-204ENST00000493348 MAGEB6Q8N7X4 407 aa9.84□□□□□ -0.83
TM4SF1-204ENST00000493348 SP7Q8TDD2 431 aaPredicted RBP9.84□□□□□ -0.83
TM4SF1-204ENST00000493348 DEFB129Q9H1M3 183 aa9.84□□□□□ -0.83
TM4SF1-204ENST00000493348 NDUFB9Q9Y6M9 179 aa9.84□□□□□ -0.83
TM4SF1-204ENST00000493348 ASTN2O75129 1339 aaPredicted RBP9.83□□□□□ -0.84
TM4SF1-204ENST00000493348 TRAF5O00463 557 aa9.83□□□□□ -0.84
TM4SF1-204ENST00000493348 ITGBL1O95965 494 aaPredicted RBP9.83□□□□□ -0.84
TM4SF1-204ENST00000493348 CENPQQ7L2Z9 268 aaPredicted RBP9.83□□□□□ -0.84
TM4SF1-204ENST00000493348 ARMC9Q7Z3E5 817 aa9.83□□□□□ -0.84
TM4SF1-204ENST00000493348 TEX11Q8IYF3 940 aa9.83□□□□□ -0.84
TM4SF1-204ENST00000493348 CDCA5Q96FF9 252 aa9.83□□□□□ -0.84
TM4SF1-204ENST00000493348 FAM163AQ96GL9 167 aaPredicted RBP9.83□□□□□ -0.84
TM4SF1-204ENST00000493348 DDRGK1Q96HY6 314 aa9.83□□□□□ -0.84
TM4SF1-204ENST00000493348 ZBED3Q96IU2 234 aaPredicted RBP9.83□□□□□ -0.84
TM4SF1-204ENST00000493348 FSD1Q9BTV5 496 aa9.83□□□□□ -0.84
TM4SF1-204ENST00000493348 TRIM34Q9BYJ4 488 aa9.83□□□□□ -0.84
TM4SF1-204ENST00000493348 PIH1D3Q9NQM4 214 aaKnown RBP9.83□□□□□ -0.84
TM4SF1-204ENST00000493348 CREBZFQ9NS37 354 aa9.83□□□□□ -0.84
TM4SF1-204ENST00000493348 PCDHAC2Q9Y5I4 1007 aa9.83□□□□□ -0.84
TM4SF1-204ENST00000493348 ZFYP08048 801 aaPredicted RBP9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 USP5P45974 858 aa9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 IREB2P48200 963 aaKnown RBP9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 PICALMQ13492 652 aa9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 RASA3Q14644 834 aa9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 FKBP1CQ5VVH2 108 aa9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 TSHZ3Q63HK5 1081 aa9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 APOBEC3HQ6NTF7 200 aaKnown RBP9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 CDC42EP5Q6NZY7 148 aa9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 FAM83AQ86UY5 434 aa9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 AMOTL1Q8IY63 956 aa9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 RILPL2Q969X0 211 aa9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 AIDAQ96BJ3 306 aa9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 ANTXR1Q9H6X2 564 aa9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 GBA2Q9HCG7 927 aaPredicted RBP9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 AATFQ9NY61 560 aaKnown RBP eCLIP9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 SCAF8Q9UPN6 1271 aaKnown RBP9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 GAKO14976 1311 aa9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 AOX1Q06278 1338 aa9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 PASKQ96RG2 1323 aa9.82□□□□□ -0.84
TM4SF1-204ENST00000493348 GPR75-ASB3A0A0A6YYF3 556 aa9.81□□□□□ -0.84
TM4SF1-204ENST00000493348 MAGEB6P1A0A0J9YX57 407 aa9.81□□□□□ -0.84
TM4SF1-204ENST00000493348 PDE6AP16499 860 aa9.81□□□□□ -0.84
TM4SF1-204ENST00000493348 CACNB3P54284 484 aa9.81□□□□□ -0.84
TM4SF1-204ENST00000493348 PDE1AP54750 535 aa9.81□□□□□ -0.84
TM4SF1-204ENST00000493348 FKBP1BP68106 108 aa9.81□□□□□ -0.84
TM4SF1-204ENST00000493348 TCP10Q12799 353 aa9.81□□□□□ -0.84
TM4SF1-204ENST00000493348 PRKG1Q13976 671 aa9.81□□□□□ -0.84
TM4SF1-204ENST00000493348 DCAF15Q66K64 600 aa9.81□□□□□ -0.84
TM4SF1-204ENST00000493348 MIGA1Q8NAN2 632 aa9.81□□□□□ -0.84
TM4SF1-204ENST00000493348 FAM151AQ8WW52 585 aa9.81□□□□□ -0.84
TM4SF1-204ENST00000493348 EVI5LQ96CN4 794 aa9.81□□□□□ -0.84
TM4SF1-204ENST00000493348 CRNKL1Q9BZJ0 848 aaKnown RBP9.81□□□□□ -0.84
TM4SF1-204ENST00000493348 ZNF532Q9HCE3 1301 aa9.81□□□□□ -0.84
TM4SF1-204ENST00000493348 MYH1P12882 1939 aa9.8□□□□□ -0.84
TM4SF1-204ENST00000493348 ENTPD3O75355 529 aa9.8□□□□□ -0.84
TM4SF1-204ENST00000493348 HLA-DOAP06340 250 aa9.8□□□□□ -0.84
TM4SF1-204ENST00000493348 ECE1P42892 770 aa9.8□□□□□ -0.84
TM4SF1-204ENST00000493348 RGS3P49796 1198 aa9.8□□□□□ -0.84
TM4SF1-204ENST00000493348 HUNKP57058 714 aa9.8□□□□□ -0.84
TM4SF1-204ENST00000493348 GRM1Q13255 1194 aa9.8□□□□□ -0.84
TM4SF1-204ENST00000493348 DEFB115Q30KQ5 88 aa9.8□□□□□ -0.84
TM4SF1-204ENST00000493348 PRAMEF18Q5VWM3 479 aa9.8□□□□□ -0.84
TM4SF1-204ENST00000493348 KBTBD3Q8NAB2 608 aa9.8□□□□□ -0.84
TM4SF1-204ENST00000493348 OTUD7AQ8TE49 926 aaPredicted RBP9.8□□□□□ -0.84
TM4SF1-204ENST00000493348 EDC3Q96F86 508 aaKnown RBP9.8□□□□□ -0.84
TM4SF1-204ENST00000493348 TMEM39BQ9GZU3 492 aa9.8□□□□□ -0.84
TM4SF1-204ENST00000493348 PPP4R2Q9NY27 417 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms