RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 ZNF274Q96GC6 653 aaPredicted RBP10.78□□□□□ -0.68
SMARCC1-208ENST00000492896 MASTLQ96GX5 879 aa10.78□□□□□ -0.68
SMARCC1-208ENST00000492896 LLPHQ9BRT6 129 aaKnown RBP10.78□□□□□ -0.68
SMARCC1-208ENST00000492896 CNNM2Q9H8M5 875 aa10.78□□□□□ -0.68
SMARCC1-208ENST00000492896 NAP1L2Q9ULW6 460 aaPredicted RBP10.78□□□□□ -0.68
SMARCC1-208ENST00000492896 ATP6V0A2Q9Y487 856 aa10.78□□□□□ -0.68
SMARCC1-208ENST00000492896 SLX4Q8IY92 1834 aa10.78□□□□□ -0.68
SMARCC1-208ENST00000492896 NEDD4P46934 1319 aa10.78□□□□□ -0.68
SMARCC1-208ENST00000492896 DDX60LQ5H9U9 1706 aaKnown RBP10.78□□□□□ -0.68
SMARCC1-208ENST00000492896 VPS37CA5D8V6 355 aaPredicted RBP10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 B4E1Z4 1266 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 F13A1P00488 732 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 LDHBP07195 334 aaKnown RBP10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 IL1R1P14778 569 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 PRDX5P30044 214 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 DEKP35659 375 aaKnown RBP10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 BAG6P46379 1132 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 EVCP57679 992 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 DYNLL1P63167 89 aaKnown RBP10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 GSTO1P78417 241 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 HMGN5P82970 282 aaKnown RBP10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 AKNAD1Q5T1N1 836 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 GIMAP6Q6P9H5 292 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 ZNF384Q8TF68 577 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 SDR42E1Q8WUS8 393 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 STAG1Q8WVM7 1258 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 TMEM87BQ96K49 555 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 CRNKL1Q9BZJ0 848 aaKnown RBP10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 KRT23Q9C075 422 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 RNF41Q9H4P4 317 aaPredicted RBP10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 CD209Q9NNX6 404 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 MTMR6Q9Y217 621 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 JAG2Q9Y219 1238 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 ATP6V1DQ9Y5K8 247 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 MYH1P12882 1939 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 MYH6P13533 1939 aa10.77□□□□□ -0.69
SMARCC1-208ENST00000492896 KLF18A0A0U1RQI7 1052 aa10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 GOLGA8BA8MQT2 603 aa10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 C6orf229H3BNL8 230 aa10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 SH2B2O14492 632 aaPredicted RBP10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 JAK2O60674 1132 aa10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 PDIA3P30101 505 aaKnown RBP10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 CTDSPL2Q05D32 466 aa10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 PPARAQ07869 468 aa10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 LARP1BQ659C4 914 aaKnown RBP10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 MFSD6Q6ZSS7 791 aa10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 CYB5R4Q7L1T6 521 aa10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 C2CD5Q86YS7 1000 aa10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 NSUN7Q8NE18 718 aaKnown RBP10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 SMARCC2Q8TAQ2 1214 aa10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 TMX4Q9H1E5 349 aaPredicted RBP10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 POLLQ9UGP5 575 aa10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 ANAPC4Q9UJX5 808 aa10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 ANGEL1Q9UNK9 670 aaKnown RBP10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 KIF3AQ9Y496 699 aa10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 ZNF646O15015 1829 aaPredicted RBP10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 KIF13BQ9NQT8 1826 aa10.76□□□□□ -0.69
SMARCC1-208ENST00000492896 PTPDC1A2A3K4 754 aa10.75□□□□□ -0.69
SMARCC1-208ENST00000492896 LDHCP07864 332 aa10.75□□□□□ -0.69
SMARCC1-208ENST00000492896 CCT2P78371 535 aaKnown RBP10.75□□□□□ -0.69
SMARCC1-208ENST00000492896 STYK1Q6J9G0 422 aa10.75□□□□□ -0.69
SMARCC1-208ENST00000492896 MPNDQ8N594 471 aa10.75□□□□□ -0.69
SMARCC1-208ENST00000492896 FAM184AQ8NB25 1140 aa10.75□□□□□ -0.69
SMARCC1-208ENST00000492896 TBC1D22AQ8WUA7 517 aa10.75□□□□□ -0.69
SMARCC1-208ENST00000492896 ZNF622Q969S3 477 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMARCC1-208ENST00000492896 NOL10Q9BSC4 688 aaKnown RBP10.75□□□□□ -0.69
SMARCC1-208ENST00000492896 GPHNQ9NQX3 736 aaPredicted RBP10.75□□□□□ -0.69
SMARCC1-208ENST00000492896 LMBRD1Q9NUN5 540 aa10.75□□□□□ -0.69
SMARCC1-208ENST00000492896 AATFQ9NY61 560 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMARCC1-208ENST00000492896 MYH8P13535 1937 aa10.75□□□□□ -0.69
SMARCC1-208ENST00000492896 PSME4Q14997 1843 aa10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 MINDY4BA8MYZ0 360 aa10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 H0YIN7 160 aa10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 DHX16O60231 1041 aaKnown RBP10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 DTNBO60941 627 aa10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 KDM4AO75164 1064 aa10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 PCP11498 1178 aaKnown RBP10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 SART3Q15020 963 aaKnown RBP10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 KLHL40Q2TBA0 621 aa10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 TMEM67Q5HYA8 995 aa10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 RRP12Q5JTH9 1297 aaKnown RBP10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 DPP8Q6V1X1 898 aaPredicted RBP10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 CDC37L1Q7L3B6 337 aa10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 CERS3Q8IU89 383 aa10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 MTA3Q9BTC8 594 aa10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 COA1Q9GZY4 146 aa10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 TOMM22Q9NS69 142 aa10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 ATP8A2Q9NTI2 1148 aa10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 ARPP21Q9UBL0 812 aaPredicted RBP10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 BRPF3Q9ULD4 1205 aa10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 DDX49Q9Y6V7 483 aaKnown RBP10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 MROH7-TTC4A0A0A0MT08 1334 aa10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 FAM205AQ6ZU69 1335 aa10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 C10orf71Q711Q0 1435 aa10.74□□□□□ -0.69
SMARCC1-208ENST00000492896 ADAMTSL1Q8N6G6 1762 aa10.73□□□□□ -0.69
SMARCC1-208ENST00000492896 H3BQV1 296 aa10.73□□□□□ -0.69
SMARCC1-208ENST00000492896 IFIT3O14879 490 aaKnown RBP10.73□□□□□ -0.69
SMARCC1-208ENST00000492896 PRPF40AO75400 957 aaKnown RBP10.73□□□□□ -0.69
SMARCC1-208ENST00000492896 CTDNEP1O95476 244 aa10.73□□□□□ -0.69
SMARCC1-208ENST00000492896 BAG3O95817 575 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms