RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 RGPD8O14715 1765 aaPredicted RBP8.45□□□□□ -1.06
NPHP3-208ENST00000490993 NT5C2P49902 561 aa8.45□□□□□ -1.06
NPHP3-208ENST00000490993 IKQ13123 557 aaPredicted RBP8.45□□□□□ -1.06
NPHP3-208ENST00000490993 BARGINQ6ZT62 677 aa8.45□□□□□ -1.06
NPHP3-208ENST00000490993 PPFIBP1Q86W92 1011 aa8.45□□□□□ -1.06
NPHP3-208ENST00000490993 PPP1R9BQ96SB3 815 aa8.45□□□□□ -1.06
NPHP3-208ENST00000490993 MCM9Q9NXL9 1143 aa8.45□□□□□ -1.06
NPHP3-208ENST00000490993 PPARAQ07869 468 aa8.45□□□□□ -1.06
NPHP3-208ENST00000490993 TTLL5Q6EMB2 1281 aa8.45□□□□□ -1.06
NPHP3-208ENST00000490993 KCNB2Q92953 911 aa8.45□□□□□ -1.06
NPHP3-208ENST00000490993 KAZALD1Q96I82 304 aa8.45□□□□□ -1.06
NPHP3-208ENST00000490993 SPATA31A1Q5TZJ5 1347 aa8.44□□□□□ -1.06
NPHP3-208ENST00000490993 TRIM75PA6NK02 468 aa8.44□□□□□ -1.06
NPHP3-208ENST00000490993 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.44□□□□□ -1.06
NPHP3-208ENST00000490993 RAB34Q9BZG1 259 aa8.44□□□□□ -1.06
NPHP3-208ENST00000490993 ARPP21Q9UBL0 812 aaPredicted RBP8.44□□□□□ -1.06
NPHP3-208ENST00000490993 KAT6BQ8WYB5 2073 aa8.44□□□□□ -1.06
NPHP3-208ENST00000490993 PPFIA3O75145 1194 aa8.44□□□□□ -1.06
NPHP3-208ENST00000490993 BCAMP50895 628 aa8.44□□□□□ -1.06
NPHP3-208ENST00000490993 ATP2B2Q01814 1243 aa8.44□□□□□ -1.06
NPHP3-208ENST00000490993 CRACR2BQ8N4Y2 399 aaPredicted RBP8.44□□□□□ -1.06
NPHP3-208ENST00000490993 SFPQP23246 707 aaKnown RBP eCLIP8.44□□□□□ -1.06
NPHP3-208ENST00000490993 KRI1Q8N9T8 703 aaKnown RBP8.44□□□□□ -1.06
NPHP3-208ENST00000490993 EYA3Q99504 573 aa8.44□□□□□ -1.06
NPHP3-208ENST00000490993 BSDC1Q9NW68 430 aaPredicted RBP8.44□□□□□ -1.06
NPHP3-208ENST00000490993 GGA1Q9UJY5 639 aa8.44□□□□□ -1.06
NPHP3-208ENST00000490993 CTDSPL2Q05D32 466 aa8.44□□□□□ -1.06
NPHP3-208ENST00000490993 TOB2Q14106 344 aaPredicted RBP8.44□□□□□ -1.06
NPHP3-208ENST00000490993 CFAP100Q494V2 611 aa8.44□□□□□ -1.06
NPHP3-208ENST00000490993 ZSCAN29Q8IWY8 852 aaPredicted RBP8.44□□□□□ -1.06
NPHP3-208ENST00000490993 ZNF34Q8IZ26 560 aa8.44□□□□□ -1.06
NPHP3-208ENST00000490993 NSUN7Q8NE18 718 aaKnown RBP8.44□□□□□ -1.06
NPHP3-208ENST00000490993 NSFL1CQ9UNZ2 370 aaKnown RBP8.44□□□□□ -1.06
NPHP3-208ENST00000490993 FILIP1Q7Z7B0 1213 aa8.43□□□□□ -1.06
NPHP3-208ENST00000490993 RIPOR2Q9Y4F9 1068 aa8.43□□□□□ -1.06
NPHP3-208ENST00000490993 CUTAO60888 179 aa8.43□□□□□ -1.06
NPHP3-208ENST00000490993 LARGE1O95461 756 aa8.43□□□□□ -1.06
NPHP3-208ENST00000490993 CCDC150Q8NCX0 1101 aa8.43□□□□□ -1.06
NPHP3-208ENST00000490993 TBC1D22AQ8WUA7 517 aa8.43□□□□□ -1.06
NPHP3-208ENST00000490993 DNAJC25Q9H1X3 360 aa8.43□□□□□ -1.06
NPHP3-208ENST00000490993 TRPC5Q9UL62 973 aaPredicted RBP8.43□□□□□ -1.06
NPHP3-208ENST00000490993 VIRMAQ69YN4 1812 aaKnown RBP8.43□□□□□ -1.06
NPHP3-208ENST00000490993 RPS6KA4O75676 772 aa8.43□□□□□ -1.06
NPHP3-208ENST00000490993 MCAMP43121 646 aa8.43□□□□□ -1.06
NPHP3-208ENST00000490993 KRT40Q6A162 431 aa8.43□□□□□ -1.06
NPHP3-208ENST00000490993 ADALQ6DHV7 355 aa8.43□□□□□ -1.06
NPHP3-208ENST00000490993 PIBF1Q8WXW3 757 aa8.43□□□□□ -1.06
NPHP3-208ENST00000490993 PUS7LQ9H0K6 701 aaKnown RBP8.43□□□□□ -1.06
NPHP3-208ENST00000490993 BMP2KQ9NSY1 1161 aaPredicted RBP8.43□□□□□ -1.06
NPHP3-208ENST00000490993 RMND1Q9NWS8 449 aa8.43□□□□□ -1.06
NPHP3-208ENST00000490993 LEMD3Q9Y2U8 911 aa8.43□□□□□ -1.06
NPHP3-208ENST00000490993 ZNF609O15014 1411 aa8.43□□□□□ -1.06
NPHP3-208ENST00000490993 ARID4AP29374 1257 aaPredicted RBP8.43□□□□□ -1.06
NPHP3-208ENST00000490993 TMEM266Q2M3C6 531 aa8.43□□□□□ -1.06
NPHP3-208ENST00000490993 PARP3Q9Y6F1 533 aa8.43□□□□□ -1.06
NPHP3-208ENST00000490993 CACNA1FO60840 1977 aa8.43□□□□□ -1.06
NPHP3-208ENST00000490993 LMO7Q8WWI1 1683 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 MPHOSPH10O00566 681 aaKnown RBP8.42□□□□□ -1.06
NPHP3-208ENST00000490993 MARCKSP29966 332 aaPredicted RBP8.42□□□□□ -1.06
NPHP3-208ENST00000490993 EIF5P55010 431 aaKnown RBP8.42□□□□□ -1.06
NPHP3-208ENST00000490993 ERFEQ4G0M1 354 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 MTA3Q9BTC8 594 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 GTPBP4Q9BZE4 634 aaKnown RBP8.42□□□□□ -1.06
NPHP3-208ENST00000490993 ZC3H12CQ9C0D7 883 aaKnown RBP8.42□□□□□ -1.06
NPHP3-208ENST00000490993 SEC31BQ9NQW1 1179 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 TCEAL9Q9UHQ7 104 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 IGSF3O75054 1194 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 UFL1O94874 794 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 ATP2B4P23634 1241 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 ALX1Q15699 326 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 FAM173BQ6P4H8 233 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 TCP11L1Q9NUJ3 509 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 RXRAP19793 462 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 MYSM1Q5VVJ2 828 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 TMC4Q7Z404 712 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 CCDC112Q8NEF3 446 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 MNS1Q8NEH6 495 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 IL17RAQ96F46 866 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 LZTS2Q9BRK4 669 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 PIH1D3Q9NQM4 214 aaKnown RBP8.42□□□□□ -1.06
NPHP3-208ENST00000490993 TFCP2L1Q9NZI6 479 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 ZDHHC9Q9Y397 364 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 CARMIL3Q8ND23 1372 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 TOP1P11387 765 aaKnown RBP8.42□□□□□ -1.06
NPHP3-208ENST00000490993 GYG1P46976 350 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 AMPD3Q01432 767 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 TTC6Q86TZ1 520 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 GAS2L3Q86XJ1 694 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 FBXO18Q8NFZ0 1043 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 RTEL1Q9NZ71 1219 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 NARFQ9UHQ1 456 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 STX8Q9UNK0 236 aa8.42□□□□□ -1.06
NPHP3-208ENST00000490993 ZNF804BA4D1E1 1349 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 MPNDQ8N594 471 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 FLAD1Q8NFF5 587 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 ZKSCAN3Q9BRR0 538 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 LRRC27Q9C0I9 530 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 ATP8A2Q9NTI2 1148 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 ARGLU1Q9NWB6 273 aaPredicted RBP8.41□□□□□ -1.06
NPHP3-208ENST00000490993 WWC3Q9ULE0 1092 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms