RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 MAPK8P45983 427 aa7.26□□□□□ -1.25
HMGN1-218ENST00000490032 MAP7Q14244 749 aa7.26□□□□□ -1.25
HMGN1-218ENST00000490032 ALG1LQ6GMV1 187 aa7.26□□□□□ -1.25
HMGN1-218ENST00000490032 DTX1Q86Y01 620 aa7.26□□□□□ -1.25
HMGN1-218ENST00000490032 GIMAP7Q8NHV1 300 aa7.26□□□□□ -1.25
HMGN1-218ENST00000490032 GATA6Q92908 595 aa7.26□□□□□ -1.25
HMGN1-218ENST00000490032 SEMA6CQ9H3T2 930 aa7.26□□□□□ -1.25
HMGN1-218ENST00000490032 PIM2Q9P1W9 311 aa7.26□□□□□ -1.25
HMGN1-218ENST00000490032 GPN3Q9UHW5 284 aaPredicted RBP7.26□□□□□ -1.25
HMGN1-218ENST00000490032 PPP1R9AQ9ULJ8 1098 aa7.26□□□□□ -1.25
HMGN1-218ENST00000490032 AP4E1Q9UPM8 1137 aa7.26□□□□□ -1.25
HMGN1-218ENST00000490032 GIPC1O14908 333 aa7.25□□□□□ -1.25
HMGN1-218ENST00000490032 TMPRSS2O15393 492 aa7.25□□□□□ -1.25
HMGN1-218ENST00000490032 ZNF862O60290 1169 aa7.25□□□□□ -1.25
HMGN1-218ENST00000490032 LIG1P18858 919 aa7.25□□□□□ -1.25
HMGN1-218ENST00000490032 KIF4BQ2VIQ3 1234 aa7.25□□□□□ -1.25
HMGN1-218ENST00000490032 SEZ6L2Q6UXD5 910 aa7.25□□□□□ -1.25
HMGN1-218ENST00000490032 ZAR1Q86SH2 424 aa7.25□□□□□ -1.25
HMGN1-218ENST00000490032 SHISA5Q8N114 240 aa7.25□□□□□ -1.25
HMGN1-218ENST00000490032 FBXL6Q8N531 539 aa7.25□□□□□ -1.25
HMGN1-218ENST00000490032 ANKRD24Q8TF21 1146 aa7.25□□□□□ -1.25
HMGN1-218ENST00000490032 WDR89Q96FK6 387 aaPredicted RBP7.25□□□□□ -1.25
HMGN1-218ENST00000490032 SETDB2Q96T68 719 aa7.25□□□□□ -1.25
HMGN1-218ENST00000490032 ATG3Q9NT62 314 aa7.25□□□□□ -1.25
HMGN1-218ENST00000490032 CRIM1Q9NZV1 1036 aa7.25□□□□□ -1.25
HMGN1-218ENST00000490032 PCDHGC5Q9Y5F6 944 aa7.25□□□□□ -1.25
HMGN1-218ENST00000490032 NFICP08651 508 aa7.24□□□□□ -1.25
HMGN1-218ENST00000490032 RAB6AP20340 208 aa7.24□□□□□ -1.25
HMGN1-218ENST00000490032 GSTT1P30711 240 aa7.24□□□□□ -1.25
HMGN1-218ENST00000490032 ADMP35318 185 aa7.24□□□□□ -1.25
HMGN1-218ENST00000490032 ASPAP45381 313 aa7.24□□□□□ -1.25
HMGN1-218ENST00000490032 METTL22Q9BUU2 404 aaPredicted RBP7.24□□□□□ -1.25
HMGN1-218ENST00000490032 OSBPL1AQ9BXW6 950 aa7.24□□□□□ -1.25
HMGN1-218ENST00000490032 OSBPL7Q9BZF2 842 aa7.24□□□□□ -1.25
HMGN1-218ENST00000490032 WWC3Q9ULE0 1092 aa7.24□□□□□ -1.25
HMGN1-218ENST00000490032 AKAP2Q9Y2D5 859 aa7.24□□□□□ -1.25
HMGN1-218ENST00000490032 SLFN14P0C7P3 912 aa7.23□□□□□ -1.25
HMGN1-218ENST00000490032 NME2P22392 152 aa7.23□□□□□ -1.25
HMGN1-218ENST00000490032 ARNTP27540 789 aa7.23□□□□□ -1.25
HMGN1-218ENST00000490032 HOXA10P31260 410 aaPredicted RBP7.23□□□□□ -1.25
HMGN1-218ENST00000490032 HNRNPUQ00839 825 aaKnown RBP eCLIP7.23□□□□□ -1.25
HMGN1-218ENST00000490032 SULF2Q8IWU5 870 aa7.23□□□□□ -1.25
HMGN1-218ENST00000490032 STK35Q8TDR2 534 aa7.23□□□□□ -1.25
HMGN1-218ENST00000490032 TBC1D32Q96NH3 1257 aa7.23□□□□□ -1.25
HMGN1-218ENST00000490032 NECAB3Q96P71 396 aaPredicted RBP7.23□□□□□ -1.25
HMGN1-218ENST00000490032 ZC3H12CQ9C0D7 883 aaKnown RBP7.23□□□□□ -1.25
HMGN1-218ENST00000490032 PPM1HQ9ULR3 514 aa7.23□□□□□ -1.25
HMGN1-218ENST00000490032 LEMD3Q9Y2U8 911 aa7.23□□□□□ -1.25
HMGN1-218ENST00000490032 P4HBP07237 508 aaKnown RBP7.22□□□□□ -1.25
HMGN1-218ENST00000490032 FOSL1P15407 271 aa7.22□□□□□ -1.25
HMGN1-218ENST00000490032 ATP2B2Q01814 1243 aa7.22□□□□□ -1.25
HMGN1-218ENST00000490032 ID3Q02535 119 aa7.22□□□□□ -1.25
HMGN1-218ENST00000490032 ZNF252P-AS1Q0IIN9 211 aa7.22□□□□□ -1.25
HMGN1-218ENST00000490032 FANCD2OSQ96PS1 177 aa7.22□□□□□ -1.25
HMGN1-218ENST00000490032 ATXN3LQ9H3M9 355 aa7.22□□□□□ -1.25
HMGN1-218ENST00000490032 C1GALT1Q9NS00 363 aa7.22□□□□□ -1.25
HMGN1-218ENST00000490032 CACNA2D2Q9NY47 1150 aa7.22□□□□□ -1.25
HMGN1-218ENST00000490032 ADAMTS4O75173 837 aa7.21□□□□□ -1.26
HMGN1-218ENST00000490032 MSMPQ1L6U9 139 aa7.21□□□□□ -1.26
HMGN1-218ENST00000490032 EMILIN2Q9BXX0 1053 aa7.21□□□□□ -1.26
HMGN1-218ENST00000490032 KRTAP4-8Q9BYQ9 185 aa7.21□□□□□ -1.26
HMGN1-218ENST00000490032 DISC1Q9NRI5 854 aa7.21□□□□□ -1.26
HMGN1-218ENST00000490032 FAM170BA6NMN3 283 aa7.2□□□□□ -1.26
HMGN1-218ENST00000490032 ENC1O14682 589 aa7.2□□□□□ -1.26
HMGN1-218ENST00000490032 DYNC1LI2O43237 492 aaPredicted RBP7.2□□□□□ -1.26
HMGN1-218ENST00000490032 COL19A1Q14993 1142 aa7.2□□□□□ -1.26
HMGN1-218ENST00000490032 KCNB2Q92953 911 aa7.2□□□□□ -1.26
HMGN1-218ENST00000490032 CEP44Q9C0F1 390 aa7.2□□□□□ -1.26
HMGN1-218ENST00000490032 C12orf49Q9H741 205 aa7.2□□□□□ -1.26
HMGN1-218ENST00000490032 SPG7Q9UQ90 795 aa7.2□□□□□ -1.26
HMGN1-218ENST00000490032 DAGLAQ9Y4D2 1042 aa7.2□□□□□ -1.26
HMGN1-218ENST00000490032 BMP6P22004 513 aa7.19□□□□□ -1.26
HMGN1-218ENST00000490032 GP2P55259 537 aaKnown RBP7.19□□□□□ -1.26
HMGN1-218ENST00000490032 CYP27A1Q02318 531 aa7.19□□□□□ -1.26
HMGN1-218ENST00000490032 TPTE2Q6XPS3 522 aa7.19□□□□□ -1.26
HMGN1-218ENST00000490032 SND1Q7KZF4 910 aaKnown RBP eCLIP7.19□□□□□ -1.26
HMGN1-218ENST00000490032 FRMD6Q96NE9 622 aa7.19□□□□□ -1.26
HMGN1-218ENST00000490032 FAM8A1Q9UBU6 413 aa7.19□□□□□ -1.26
HMGN1-218ENST00000490032 WNT11O96014 354 aa7.18□□□□□ -1.26
HMGN1-218ENST00000490032 LDHBP07195 334 aaKnown RBP7.18□□□□□ -1.26
HMGN1-218ENST00000490032 ZC3H12AQ5D1E8 599 aaKnown RBP7.18□□□□□ -1.26
HMGN1-218ENST00000490032 PSMG3-AS1Q96PY0 264 aa7.18□□□□□ -1.26
HMGN1-218ENST00000490032 PIDD1Q9HB75 910 aa7.18□□□□□ -1.26
HMGN1-218ENST00000490032 OAS3Q9Y6K5 1087 aaKnown RBP7.18□□□□□ -1.26
HMGN1-218ENST00000490032 CYP26A1O43174 497 aa7.17□□□□□ -1.26
HMGN1-218ENST00000490032 PAGE1O75459 146 aa7.17□□□□□ -1.26
HMGN1-218ENST00000490032 PRNPP04156 253 aa7.17□□□□□ -1.26
HMGN1-218ENST00000490032 ERVK-24P63145 666 aa7.17□□□□□ -1.26
HMGN1-218ENST00000490032 TTLL4Q14679 1199 aa7.17□□□□□ -1.26
HMGN1-218ENST00000490032 DUSP27Q5VZP5 1158 aa7.17□□□□□ -1.26
HMGN1-218ENST00000490032 MAP1SQ66K74 1059 aaPredicted RBP7.17□□□□□ -1.26
HMGN1-218ENST00000490032 SCARA3Q6AZY7 606 aa7.17□□□□□ -1.26
HMGN1-218ENST00000490032 OGFOD3Q6PK18 319 aa7.17□□□□□ -1.26
HMGN1-218ENST00000490032 ZNF765Q7L2R6 523 aa7.17□□□□□ -1.26
HMGN1-218ENST00000490032 SMYD4Q8IYR2 804 aaPredicted RBP7.17□□□□□ -1.26
HMGN1-218ENST00000490032 GPBAR1Q8TDU6 330 aa7.17□□□□□ -1.26
HMGN1-218ENST00000490032 SAMM50Q9Y512 469 aa7.17□□□□□ -1.26
HMGN1-218ENST00000490032 PRPF40AO75400 957 aaKnown RBP7.16□□□□□ -1.26
HMGN1-218ENST00000490032 TRIM37O94972 964 aa7.16□□□□□ -1.26
HMGN1-218ENST00000490032 USP17L7P0C7H9 530 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 1303.9 ms