RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 ADGRG1Q9Y653 693 aa10.07□□□□□ -0.8
VTI1A-207ENST00000489357 TAF1P21675 1872 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 TAF5LO75529 589 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 PDCP20941 246 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 CHRNA5P30532 468 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 AK2P54819 239 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 ZNF445P59923 1031 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 ST5P78524 1137 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 PTH1RQ03431 593 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 IFIT5Q13325 482 aaKnown RBP10.06□□□□□ -0.8
VTI1A-207ENST00000489357 CSPP1Q1MSJ5 1256 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 CCDC158Q5M9N0 1113 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 STYK1Q6J9G0 422 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 ADGRD1Q6QNK2 874 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 SYNE4Q8N205 404 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 CCDC24Q8N4L8 307 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 TMEM87AQ8NBN3 555 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 KLHDC4Q8TBB5 520 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 C7orf43Q8WVR3 580 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 JAKMIP1Q96N16 626 aaKnown RBP10.06□□□□□ -0.8
VTI1A-207ENST00000489357 PDRG1Q9NUG6 133 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 ZDHHC9Q9Y397 364 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 DDX49Q9Y6V7 483 aaKnown RBP10.06□□□□□ -0.8
VTI1A-207ENST00000489357 FER1L6Q2WGJ9 1857 aa10.06□□□□□ -0.8
VTI1A-207ENST00000489357 RTL9Q8NET4 1388 aa10.05□□□□□ -0.8
VTI1A-207ENST00000489357 A0A0D9SFI3 127 aa10.05□□□□□ -0.8
VTI1A-207ENST00000489357 H0YIN7 160 aa10.05□□□□□ -0.8
VTI1A-207ENST00000489357 SLC27A2O14975 620 aa10.05□□□□□ -0.8
VTI1A-207ENST00000489357 GRIN3BO60391 1043 aa10.05□□□□□ -0.8
VTI1A-207ENST00000489357 OATP04181 439 aa10.05□□□□□ -0.8
VTI1A-207ENST00000489357 PRPF40BQ6NWY9 871 aaKnown RBP10.05□□□□□ -0.8
VTI1A-207ENST00000489357 BLOC1S2Q6QNY1 142 aa10.05□□□□□ -0.8
VTI1A-207ENST00000489357 C2CD5Q86YS7 1000 aa10.05□□□□□ -0.8
VTI1A-207ENST00000489357 TATDN2Q93075 761 aa10.05□□□□□ -0.8
VTI1A-207ENST00000489357 SYAP1Q96A49 352 aaPredicted RBP10.05□□□□□ -0.8
VTI1A-207ENST00000489357 FAM227BQ96M60 508 aa10.05□□□□□ -0.8
VTI1A-207ENST00000489357 DBNDD2Q9BQY9 259 aa10.05□□□□□ -0.8
VTI1A-207ENST00000489357 LMBRD1Q9NUN5 540 aa10.05□□□□□ -0.8
VTI1A-207ENST00000489357 PAG1Q9NWQ8 432 aa10.05□□□□□ -0.8
VTI1A-207ENST00000489357 PIM2Q9P1W9 311 aa10.05□□□□□ -0.8
VTI1A-207ENST00000489357 PNMA3Q9UL41 463 aa10.05□□□□□ -0.8
VTI1A-207ENST00000489357 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.05□□□□□ -0.8
VTI1A-207ENST00000489357 ARAP2Q8WZ64 1704 aa10.04□□□□□ -0.8
VTI1A-207ENST00000489357 CACNA1SQ13698 1873 aa10.04□□□□□ -0.8
VTI1A-207ENST00000489357 CCDC88AQ3V6T2 1871 aa10.04□□□□□ -0.8
VTI1A-207ENST00000489357 A0A1B0GUL7 405 aa10.04□□□□□ -0.8
VTI1A-207ENST00000489357 PDE8AO60658 829 aa10.04□□□□□ -0.8
VTI1A-207ENST00000489357 NPR1P16066 1061 aa10.04□□□□□ -0.8
VTI1A-207ENST00000489357 RPS6KB1P23443 525 aa10.04□□□□□ -0.8
VTI1A-207ENST00000489357 SF3B3Q15393 1217 aaKnown RBP10.04□□□□□ -0.8
VTI1A-207ENST00000489357 ZMYM1Q5SVZ6 1142 aa10.04□□□□□ -0.8
VTI1A-207ENST00000489357 MCTP1Q6DN14 999 aa10.04□□□□□ -0.8
VTI1A-207ENST00000489357 NUDT18Q6ZVK8 323 aa10.04□□□□□ -0.8
VTI1A-207ENST00000489357 FBXL16Q8N461 479 aa10.04□□□□□ -0.8
VTI1A-207ENST00000489357 RBM46Q8TBY0 533 aaKnown RBP10.04□□□□□ -0.8
VTI1A-207ENST00000489357 MASTLQ96GX5 879 aa10.04□□□□□ -0.8
VTI1A-207ENST00000489357 TRMT112Q9UI30 125 aaKnown RBP10.04□□□□□ -0.8
VTI1A-207ENST00000489357 SMC3Q9UQE7 1217 aa10.04□□□□□ -0.8
VTI1A-207ENST00000489357 CHMP3Q9Y3E7 222 aa10.04□□□□□ -0.8
VTI1A-207ENST00000489357 GOLGB1Q14789 3259 aaKnown RBP10.03□□□□□ -0.8
VTI1A-207ENST00000489357 ANKRD18BA2A2Z9 1011 aa10.03□□□□□ -0.8
VTI1A-207ENST00000489357 FAM177BA6PVY3 158 aa10.03□□□□□ -0.8
VTI1A-207ENST00000489357 C3orf80F5H4A9 247 aa10.03□□□□□ -0.8
VTI1A-207ENST00000489357 IFIT1P09914 478 aaKnown RBP10.03□□□□□ -0.8
VTI1A-207ENST00000489357 NCLP19338 710 aaKnown RBP10.03□□□□□ -0.8
VTI1A-207ENST00000489357 CTSWP56202 376 aa10.03□□□□□ -0.8
VTI1A-207ENST00000489357 TTF1Q15361 905 aaPredicted RBP10.03□□□□□ -0.8
VTI1A-207ENST00000489357 TAF7LQ5H9L4 462 aa10.03□□□□□ -0.8
VTI1A-207ENST00000489357 ZSCAN25Q6NSZ9 544 aa10.03□□□□□ -0.8
VTI1A-207ENST00000489357 TTLL6Q8N841 843 aa10.03□□□□□ -0.8
VTI1A-207ENST00000489357 RGS22Q8NE09 1264 aa10.03□□□□□ -0.8
VTI1A-207ENST00000489357 SNED1Q8TER0 1413 aa10.03□□□□□ -0.8
VTI1A-207ENST00000489357 FAM89AQ96GI7 184 aa10.03□□□□□ -0.8
VTI1A-207ENST00000489357 CRAMP1Q96RY5 1269 aa10.03□□□□□ -0.8
VTI1A-207ENST00000489357 GRPEL1Q9HAV7 217 aa10.03□□□□□ -0.8
VTI1A-207ENST00000489357 CTNNA3Q9UI47 895 aa10.03□□□□□ -0.8
VTI1A-207ENST00000489357 UTRNP46939 3433 aa10.03□□□□□ -0.8
VTI1A-207ENST00000489357 DICER1Q9UPY3 1922 aaKnown RBP10.02□□□□□ -0.81
VTI1A-207ENST00000489357 BHMG1C9JSJ3 638 aaPredicted RBP10.02□□□□□ -0.81
VTI1A-207ENST00000489357 RNF113AO15541 343 aaKnown RBP10.02□□□□□ -0.81
VTI1A-207ENST00000489357 STX6O43752 255 aa10.02□□□□□ -0.81
VTI1A-207ENST00000489357 ZSCAN22P10073 491 aaPredicted RBP10.02□□□□□ -0.81
VTI1A-207ENST00000489357 HCLS1P14317 486 aaPredicted RBP10.02□□□□□ -0.81
VTI1A-207ENST00000489357 PKP1Q13835 747 aa10.02□□□□□ -0.81
VTI1A-207ENST00000489357 ADCK5Q3MIX3 580 aa10.02□□□□□ -0.81
VTI1A-207ENST00000489357 DALRD3Q5D0E6 543 aaKnown RBP10.02□□□□□ -0.81
VTI1A-207ENST00000489357 TTLL11Q8NHH1 800 aa10.02□□□□□ -0.81
VTI1A-207ENST00000489357 PXYLP1Q8TE99 480 aa10.02□□□□□ -0.81
VTI1A-207ENST00000489357 CNKSR1Q969H4 720 aa10.02□□□□□ -0.81
VTI1A-207ENST00000489357 NEUROD6Q96NK8 337 aa10.02□□□□□ -0.81
VTI1A-207ENST00000489357 NLRP3Q96P20 1036 aa10.02□□□□□ -0.81
VTI1A-207ENST00000489357 LLPHQ9BRT6 129 aaKnown RBP10.02□□□□□ -0.81
VTI1A-207ENST00000489357 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.02□□□□□ -0.81
VTI1A-207ENST00000489357 NBPF3Q9H094 633 aa10.02□□□□□ -0.81
VTI1A-207ENST00000489357 PCDH10Q9P2E7 1040 aa10.02□□□□□ -0.81
VTI1A-207ENST00000489357 BCS1LQ9Y276 419 aa10.02□□□□□ -0.81
VTI1A-207ENST00000489357 KIF3AQ9Y496 699 aa10.02□□□□□ -0.81
VTI1A-207ENST00000489357 RIPOR2Q9Y4F9 1068 aa10.02□□□□□ -0.81
VTI1A-207ENST00000489357 MROH5Q6ZUA9 1318 aa10.02□□□□□ -0.81
VTI1A-207ENST00000489357 SMAPO00193 183 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms