RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 MCOLN1Q9GZU1 580 aa17.3■□□□□ 0.36
VTI1A-206ENST00000489142 MYO5AQ9Y4I1 1855 aaKnown RBP17.29■□□□□ 0.36
VTI1A-206ENST00000489142 VGLL4Q14135 290 aa17.29■□□□□ 0.36
VTI1A-206ENST00000489142 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.29■□□□□ 0.36
VTI1A-206ENST00000489142 TBC1D9Q6ZT07 1266 aa17.29■□□□□ 0.36
VTI1A-206ENST00000489142 MIGA2Q7L4E1 593 aa17.29■□□□□ 0.36
VTI1A-206ENST00000489142 R3HDMLQ9H3Y0 253 aa17.29■□□□□ 0.36
VTI1A-206ENST00000489142 USP40Q9NVE5 1235 aa17.29■□□□□ 0.36
VTI1A-206ENST00000489142 HMG20BQ9P0W2 317 aa17.29■□□□□ 0.36
VTI1A-206ENST00000489142 DOCK2Q92608 1830 aa17.28■□□□□ 0.36
VTI1A-206ENST00000489142 TNNI3KQ59H18 835 aa17.28■□□□□ 0.36
VTI1A-206ENST00000489142 CEP85Q6P2H3 762 aa17.28■□□□□ 0.36
VTI1A-206ENST00000489142 FAM83AQ86UY5 434 aa17.28■□□□□ 0.36
VTI1A-206ENST00000489142 ZGPATQ8N5A5 531 aaKnown RBP17.28■□□□□ 0.36
VTI1A-206ENST00000489142 SPATA5Q8NB90 893 aa17.28■□□□□ 0.36
VTI1A-206ENST00000489142 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.28■□□□□ 0.36
VTI1A-206ENST00000489142 OPTNQ96CV9 577 aa17.28■□□□□ 0.36
VTI1A-206ENST00000489142 DBNDD2Q9BQY9 259 aa17.28■□□□□ 0.36
VTI1A-206ENST00000489142 FPGT-TNNI3KV9GXZ4 949 aa17.28■□□□□ 0.36
VTI1A-206ENST00000489142 PDS5AQ29RF7 1337 aaKnown RBP17.27■□□□□ 0.36
VTI1A-206ENST00000489142 MANSC4A6NHS7 340 aaPredicted RBP17.27■□□□□ 0.36
VTI1A-206ENST00000489142 IGF2BP3O00425 579 aaKnown RBP eCLIP17.27■□□□□ 0.36
VTI1A-206ENST00000489142 ZBTB48P10074 688 aaPredicted RBP17.27■□□□□ 0.36
VTI1A-206ENST00000489142 MCAMP43121 646 aa17.27■□□□□ 0.36
VTI1A-206ENST00000489142 ZFPM1Q8IX07 1006 aa17.27■□□□□ 0.36
VTI1A-206ENST00000489142 WRNIP1Q96S55 665 aa17.27■□□□□ 0.36
VTI1A-206ENST00000489142 SNRKQ9NRH2 765 aa17.27■□□□□ 0.36
VTI1A-206ENST00000489142 FAM198AQ9UFP1 575 aa17.27■□□□□ 0.36
VTI1A-206ENST00000489142 RCAN3Q9UKA8 241 aa17.27■□□□□ 0.36
VTI1A-206ENST00000489142 COG6Q9Y2V7 657 aa17.27■□□□□ 0.36
VTI1A-206ENST00000489142 GAKO14976 1311 aa17.26■□□□□ 0.35
VTI1A-206ENST00000489142 CCDC85CA6NKD9 419 aa17.26■□□□□ 0.35
VTI1A-206ENST00000489142 ARID4AP29374 1257 aaPredicted RBP17.26■□□□□ 0.35
VTI1A-206ENST00000489142 MAP3K9P80192 1104 aa17.26■□□□□ 0.35
VTI1A-206ENST00000489142 MECOMQ03112 1051 aa17.26■□□□□ 0.35
VTI1A-206ENST00000489142 FKBP1CQ5VVH2 108 aa17.26■□□□□ 0.35
VTI1A-206ENST00000489142 ERICH6Q7L0X2 663 aa17.26■□□□□ 0.35
VTI1A-206ENST00000489142 IFNL1Q8IU54 200 aa17.26■□□□□ 0.35
VTI1A-206ENST00000489142 ZNF384Q8TF68 577 aa17.26■□□□□ 0.35
VTI1A-206ENST00000489142 ZNF296Q8WUU4 475 aaPredicted RBP17.26■□□□□ 0.35
VTI1A-206ENST00000489142 ZKSCAN4Q969J2 545 aaPredicted RBP17.26■□□□□ 0.35
VTI1A-206ENST00000489142 TLR7Q9NYK1 1049 aaKnown RBP17.26■□□□□ 0.35
VTI1A-206ENST00000489142 CSADQ9Y600 493 aa17.26■□□□□ 0.35
VTI1A-206ENST00000489142 RPAP1Q9BWH6 1393 aaPredicted RBP17.26■□□□□ 0.35
VTI1A-206ENST00000489142 BTDP43251 543 aa17.25■□□□□ 0.35
VTI1A-206ENST00000489142 TTC39AQ5SRH9 613 aa17.25■□□□□ 0.35
VTI1A-206ENST00000489142 SPTY2D1Q68D10 685 aaPredicted RBP17.25■□□□□ 0.35
VTI1A-206ENST00000489142 FAM151AQ8WW52 585 aa17.25■□□□□ 0.35
VTI1A-206ENST00000489142 OTUD5Q96G74 571 aa17.25■□□□□ 0.35
VTI1A-206ENST00000489142 EXOC6BQ9Y2D4 811 aa17.25■□□□□ 0.35
VTI1A-206ENST00000489142 SNCAIPQ9Y6H5 919 aa17.25■□□□□ 0.35
VTI1A-206ENST00000489142 MAST2Q6P0Q8 1798 aa17.25■□□□□ 0.35
VTI1A-206ENST00000489142 MROH7-TTC4A0A0A0MT08 1334 aa17.24■□□□□ 0.35
VTI1A-206ENST00000489142 UNCXA6NJT0 531 aa17.24■□□□□ 0.35
VTI1A-206ENST00000489142 GPR25O00155 361 aa17.24■□□□□ 0.35
VTI1A-206ENST00000489142 ZBTB22O15209 634 aa17.24■□□□□ 0.35
VTI1A-206ENST00000489142 RGS3P49796 1198 aa17.24■□□□□ 0.35
VTI1A-206ENST00000489142 PTPN18Q99952 460 aa17.24■□□□□ 0.35
VTI1A-206ENST00000489142 CCDC8Q9H0W5 538 aaPredicted RBP17.24■□□□□ 0.35
VTI1A-206ENST00000489142 RAI14Q9P0K7 980 aa17.24■□□□□ 0.35
VTI1A-206ENST00000489142 NOP58Q9Y2X3 529 aaKnown RBP17.24■□□□□ 0.35
VTI1A-206ENST00000489142 UQCRFS1P1P0C7P4 283 aa17.23■□□□□ 0.35
VTI1A-206ENST00000489142 SLURP2P0DP57 97 aa17.23■□□□□ 0.35
VTI1A-206ENST00000489142 INPP5BP32019 993 aa17.23■□□□□ 0.35
VTI1A-206ENST00000489142 PICALMQ13492 652 aa17.23■□□□□ 0.35
VTI1A-206ENST00000489142 C20orf194Q5TEA3 1177 aa17.23■□□□□ 0.35
VTI1A-206ENST00000489142 DCAF15Q66K64 600 aa17.23■□□□□ 0.35
VTI1A-206ENST00000489142 BCL11AQ9H165 835 aa17.23■□□□□ 0.35
VTI1A-206ENST00000489142 GPR108Q9NPR9 543 aa17.23■□□□□ 0.35
VTI1A-206ENST00000489142 DDX4Q9NQI0 724 aaKnown RBP17.23■□□□□ 0.35
VTI1A-206ENST00000489142 DBNLQ9UJU6 430 aaKnown RBP17.23■□□□□ 0.35
VTI1A-206ENST00000489142 RFX7Q2KHR2 1363 aa17.23■□□□□ 0.35
VTI1A-206ENST00000489142 CTU1Q7Z7A3 348 aaKnown RBP17.22■□□□□ 0.35
VTI1A-206ENST00000489142 SLF2Q8IX21 1173 aa17.22■□□□□ 0.35
VTI1A-206ENST00000489142 NSUN4Q96CB9 384 aaKnown RBP17.22■□□□□ 0.35
VTI1A-206ENST00000489142 EAF2Q96CJ1 260 aaPredicted RBP17.22■□□□□ 0.35
VTI1A-206ENST00000489142 HOOK2Q96ED9 719 aa17.22■□□□□ 0.35
VTI1A-206ENST00000489142 MS4A4AQ96JQ5 239 aa17.22■□□□□ 0.35
VTI1A-206ENST00000489142 ZNF341Q9BYN7 854 aa17.22■□□□□ 0.35
VTI1A-206ENST00000489142 LRP2BPQ9P2M1 347 aa17.22■□□□□ 0.35
VTI1A-206ENST00000489142 CDK5RAP2Q96SN8 1893 aa17.21■□□□□ 0.35
VTI1A-206ENST00000489142 APBB1O00213 710 aa17.21■□□□□ 0.35
VTI1A-206ENST00000489142 WDHD1O75717 1129 aaPredicted RBP17.21■□□□□ 0.35
VTI1A-206ENST00000489142 MS4A1P11836 297 aa17.21■□□□□ 0.35
VTI1A-206ENST00000489142 CCDC158Q5M9N0 1113 aa17.21■□□□□ 0.35
VTI1A-206ENST00000489142 SH3BP5LQ7L8J4 393 aa17.21■□□□□ 0.35
VTI1A-206ENST00000489142 ZSCAN29Q8IWY8 852 aaPredicted RBP17.21■□□□□ 0.35
VTI1A-206ENST00000489142 BRI3BPQ8WY22 251 aa17.21■□□□□ 0.35
VTI1A-206ENST00000489142 NDUFB9Q9Y6M9 179 aa17.21■□□□□ 0.35
VTI1A-206ENST00000489142 GPR75-ASB3A0A0A6YYF3 556 aa17.2■□□□□ 0.34
VTI1A-206ENST00000489142 CCL15-CCL14A0A0B4J2E2 113 aa17.2■□□□□ 0.34
VTI1A-206ENST00000489142 DDTLA6NHG4 134 aaPredicted RBP17.2■□□□□ 0.34
VTI1A-206ENST00000489142 SPDYE5A6NIY4 337 aa17.2■□□□□ 0.34
VTI1A-206ENST00000489142 ALDH1A1P00352 501 aa17.2■□□□□ 0.34
VTI1A-206ENST00000489142 INHBEP58166 350 aa17.2■□□□□ 0.34
VTI1A-206ENST00000489142 RHBDL3P58872 404 aa17.2■□□□□ 0.34
VTI1A-206ENST00000489142 CRHR2Q13324 411 aa17.2■□□□□ 0.34
VTI1A-206ENST00000489142 CCL15Q16663 113 aa17.2■□□□□ 0.34
VTI1A-206ENST00000489142 FAM163AQ96GL9 167 aaPredicted RBP17.2■□□□□ 0.34
VTI1A-206ENST00000489142 IDI2Q9BXS1 227 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms