RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 COG6Q9Y2V7 657 aa30.8■■■□□ 2.52
HMGN1-217ENST00000489072 TM4SF4P48230 202 aa30.79■■■□□ 2.52
HMGN1-217ENST00000489072 WNK4Q96J92 1243 aa30.79■■■□□ 2.52
HMGN1-217ENST00000489072 ANKRD13AQ8IZ07 590 aa30.78■■■□□ 2.52
HMGN1-217ENST00000489072 SPATA5Q8NB90 893 aa30.78■■■□□ 2.52
HMGN1-217ENST00000489072 DBNDD2Q9BQY9 259 aa30.78■■■□□ 2.52
HMGN1-217ENST00000489072 GAKO14976 1311 aa30.77■■■□□ 2.52
HMGN1-217ENST00000489072 CAPN15O75808 1086 aa30.77■■■□□ 2.52
HMGN1-217ENST00000489072 MCAMP43121 646 aa30.77■■■□□ 2.52
HMGN1-217ENST00000489072 NFIAQ12857 509 aa30.77■■■□□ 2.52
HMGN1-217ENST00000489072 DZIP1Q86YF9 867 aaKnown RBP30.77■■■□□ 2.52
HMGN1-217ENST00000489072 RPAP1Q9BWH6 1393 aaPredicted RBP30.77■■■□□ 2.52
HMGN1-217ENST00000489072 GJA5P36382 358 aa30.76■■■□□ 2.51
HMGN1-217ENST00000489072 SPTY2D1Q68D10 685 aaPredicted RBP30.76■■■□□ 2.51
HMGN1-217ENST00000489072 ZNF384Q8TF68 577 aa30.76■■■□□ 2.51
HMGN1-217ENST00000489072 USP40Q9NVE5 1235 aa30.76■■■□□ 2.51
HMGN1-217ENST00000489072 DDX19BQ9UMR2 479 aa30.76■■■□□ 2.51
HMGN1-217ENST00000489072 AK9Q5TCS8 1911 aa30.75■■■□□ 2.51
HMGN1-217ENST00000489072 ZBTB48P10074 688 aaPredicted RBP30.75■■■□□ 2.51
HMGN1-217ENST00000489072 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.75■■■□□ 2.51
HMGN1-217ENST00000489072 TBC1D9Q6ZT07 1266 aa30.75■■■□□ 2.51
HMGN1-217ENST00000489072 UQCRFS1P1P0C7P4 283 aa30.74■■■□□ 2.51
HMGN1-217ENST00000489072 MECOMQ03112 1051 aa30.74■■■□□ 2.51
HMGN1-217ENST00000489072 SREBF2Q12772 1141 aa30.74■■■□□ 2.51
HMGN1-217ENST00000489072 C20orf194Q5TEA3 1177 aa30.74■■■□□ 2.51
HMGN1-217ENST00000489072 ERICH6Q7L0X2 663 aa30.74■■■□□ 2.51
HMGN1-217ENST00000489072 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.74■■■□□ 2.51
HMGN1-217ENST00000489072 FAM151AQ8WW52 585 aa30.74■■■□□ 2.51
HMGN1-217ENST00000489072 ELP3Q9H9T3 547 aa30.74■■■□□ 2.51
HMGN1-217ENST00000489072 ZBTB40Q9NUA8 1239 aa30.74■■■□□ 2.51
HMGN1-217ENST00000489072 FAM198AQ9UFP1 575 aa30.74■■■□□ 2.51
HMGN1-217ENST00000489072 EXOC6BQ9Y2D4 811 aa30.74■■■□□ 2.51
HMGN1-217ENST00000489072 TCP10Q12799 353 aa30.73■■■□□ 2.51
HMGN1-217ENST00000489072 FAM163AQ96GL9 167 aaPredicted RBP30.73■■■□□ 2.51
HMGN1-217ENST00000489072 TLR7Q9NYK1 1049 aaKnown RBP30.73■■■□□ 2.51
HMGN1-217ENST00000489072 MAP3K9P80192 1104 aa30.72■■■□□ 2.51
HMGN1-217ENST00000489072 DBNLQ9UJU6 430 aaKnown RBP30.72■■■□□ 2.51
HMGN1-217ENST00000489072 MROH7-TTC4A0A0A0MT08 1334 aa30.72■■■□□ 2.51
HMGN1-217ENST00000489072 VGLL4Q14135 290 aa30.71■■■□□ 2.51
HMGN1-217ENST00000489072 TTC39AQ5SRH9 613 aa30.71■■■□□ 2.51
HMGN1-217ENST00000489072 SLF2Q8IX21 1173 aa30.71■■■□□ 2.51
HMGN1-217ENST00000489072 EAF2Q96CJ1 260 aaPredicted RBP30.71■■■□□ 2.51
HMGN1-217ENST00000489072 SNRKQ9NRH2 765 aa30.71■■■□□ 2.51
HMGN1-217ENST00000489072 RFX7Q2KHR2 1363 aa30.7■■■□□ 2.51
HMGN1-217ENST00000489072 MYO5AQ9Y4I1 1855 aaKnown RBP30.7■■■□□ 2.51
HMGN1-217ENST00000489072 MANSC4A6NHS7 340 aaPredicted RBP30.7■■■□□ 2.51
HMGN1-217ENST00000489072 TBC1D8O95759 1140 aa30.7■■■□□ 2.51
HMGN1-217ENST00000489072 CCDC158Q5M9N0 1113 aa30.7■■■□□ 2.51
HMGN1-217ENST00000489072 ZFPM1Q8IX07 1006 aa30.7■■■□□ 2.51
HMGN1-217ENST00000489072 SIRT2Q8IXJ6 389 aa30.7■■■□□ 2.51
HMGN1-217ENST00000489072 CNKSR2Q8WXI2 1034 aa30.7■■■□□ 2.51
HMGN1-217ENST00000489072 NSUN4Q96CB9 384 aaKnown RBP30.7■■■□□ 2.51
HMGN1-217ENST00000489072 CCDC8Q9H0W5 538 aaPredicted RBP30.7■■■□□ 2.51
HMGN1-217ENST00000489072 BTDP43251 543 aa30.69■■■□□ 2.5
HMGN1-217ENST00000489072 OPTNQ96CV9 577 aa30.69■■■□□ 2.5
HMGN1-217ENST00000489072 HOOK2Q96ED9 719 aa30.69■■■□□ 2.5
HMGN1-217ENST00000489072 PDE3AQ14432 1141 aa30.68■■■□□ 2.5
HMGN1-217ENST00000489072 MIGA2Q7L4E1 593 aa30.68■■■□□ 2.5
HMGN1-217ENST00000489072 RPAP2Q8IXW5 612 aaPredicted RBP30.68■■■□□ 2.5
HMGN1-217ENST00000489072 IDI2Q9BXS1 227 aa30.68■■■□□ 2.5
HMGN1-217ENST00000489072 GPR75-ASB3A0A0A6YYF3 556 aa30.67■■■□□ 2.5
HMGN1-217ENST00000489072 RGS3P49796 1198 aa30.67■■■□□ 2.5
HMGN1-217ENST00000489072 DCAF15Q66K64 600 aa30.67■■■□□ 2.5
HMGN1-217ENST00000489072 ZNF512BQ96KM6 892 aaPredicted RBP30.67■■■□□ 2.5
HMGN1-217ENST00000489072 WRNIP1Q96S55 665 aa30.67■■■□□ 2.5
HMGN1-217ENST00000489072 RAI14Q9P0K7 980 aa30.67■■■□□ 2.5
HMGN1-217ENST00000489072 CSADQ9Y600 493 aa30.67■■■□□ 2.5
HMGN1-217ENST00000489072 DOCK2Q92608 1830 aa30.66■■■□□ 2.5
HMGN1-217ENST00000489072 IGF2BP3O00425 579 aaKnown RBP eCLIP30.66■■■□□ 2.5
HMGN1-217ENST00000489072 INHBEP58166 350 aa30.66■■■□□ 2.5
HMGN1-217ENST00000489072 IFNL1Q8IU54 200 aa30.66■■■□□ 2.5
HMGN1-217ENST00000489072 ERC1Q8IUD2 1116 aa30.66■■■□□ 2.5
HMGN1-217ENST00000489072 ABHD8Q96I13 439 aa30.66■■■□□ 2.5
HMGN1-217ENST00000489072 R3HDMLQ9H3Y0 253 aa30.66■■■□□ 2.5
HMGN1-217ENST00000489072 SNCAIPQ9Y6H5 919 aa30.66■■■□□ 2.5
HMGN1-217ENST00000489072 MAST2Q6P0Q8 1798 aa30.66■■■□□ 2.5
HMGN1-217ENST00000489072 WDHD1O75717 1129 aaPredicted RBP30.65■■■□□ 2.5
HMGN1-217ENST00000489072 RHBDL3P58872 404 aa30.65■■■□□ 2.5
HMGN1-217ENST00000489072 ZKSCAN4Q969J2 545 aaPredicted RBP30.65■■■□□ 2.5
HMGN1-217ENST00000489072 ZNF341Q9BYN7 854 aa30.65■■■□□ 2.5
HMGN1-217ENST00000489072 MCOLN1Q9GZU1 580 aa30.65■■■□□ 2.5
HMGN1-217ENST00000489072 DDX4Q9NQI0 724 aaKnown RBP30.65■■■□□ 2.5
HMGN1-217ENST00000489072 LRP2BPQ9P2M1 347 aa30.65■■■□□ 2.5
HMGN1-217ENST00000489072 ENTPD3O75355 529 aa30.64■■■□□ 2.5
HMGN1-217ENST00000489072 CYP2E1P05181 493 aaPredicted RBP30.64■■■□□ 2.5
HMGN1-217ENST00000489072 GSTO1P78417 241 aa30.64■■■□□ 2.5
HMGN1-217ENST00000489072 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.64■■■□□ 2.5
HMGN1-217ENST00000489072 CFHR5Q9BXR6 569 aa30.64■■■□□ 2.5
HMGN1-217ENST00000489072 LDHCP07864 332 aa30.63■■■□□ 2.49
HMGN1-217ENST00000489072 ZAP70P43403 619 aa30.63■■■□□ 2.49
HMGN1-217ENST00000489072 DGKZQ13574 1117 aa30.63■■■□□ 2.49
HMGN1-217ENST00000489072 HSP90AB4PQ58FF6 505 aa30.63■■■□□ 2.49
HMGN1-217ENST00000489072 SH3BP5LQ7L8J4 393 aa30.63■■■□□ 2.49
HMGN1-217ENST00000489072 RHPN1Q8TCX5 695 aa30.63■■■□□ 2.49
HMGN1-217ENST00000489072 MS4A4AQ96JQ5 239 aa30.63■■■□□ 2.49
HMGN1-217ENST00000489072 CHMP4BQ9H444 224 aaKnown RBP30.63■■■□□ 2.49
HMGN1-217ENST00000489072 IL1RAPL2Q9NP60 686 aa30.63■■■□□ 2.49
HMGN1-217ENST00000489072 ATRNL1Q5VV63 1379 aa30.63■■■□□ 2.49
HMGN1-217ENST00000489072 TESPA1A2RU30 521 aaPredicted RBP30.62■■■□□ 2.49
HMGN1-217ENST00000489072 SPDYE5A6NIY4 337 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms