RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 ANKS3Q6ZW76 656 aa7.07□□□□□ -1.28
SRRM1-215ENST00000488317 GALNT6Q8NCL4 622 aa7.07□□□□□ -1.28
SRRM1-215ENST00000488317 ZNF417Q8TAU3 575 aa7.07□□□□□ -1.28
SRRM1-215ENST00000488317 EDARADDQ8WWZ3 215 aa7.07□□□□□ -1.28
SRRM1-215ENST00000488317 ACDQ96AP0 544 aa7.07□□□□□ -1.28
SRRM1-215ENST00000488317 ZNF587Q96SQ5 575 aaPredicted RBP7.07□□□□□ -1.28
SRRM1-215ENST00000488317 LRRC3Q9BY71 257 aa7.07□□□□□ -1.28
SRRM1-215ENST00000488317 SOX17Q9H6I2 414 aaPredicted RBP7.07□□□□□ -1.28
SRRM1-215ENST00000488317 TERTO14746 1132 aaKnown RBP7.06□□□□□ -1.28
SRRM1-215ENST00000488317 CILPO75339 1184 aa7.06□□□□□ -1.28
SRRM1-215ENST00000488317 TRIM37O94972 964 aa7.06□□□□□ -1.28
SRRM1-215ENST00000488317 ADAMTS2O95450 1211 aa7.06□□□□□ -1.28
SRRM1-215ENST00000488317 VSIG8P0DPA2 414 aa7.06□□□□□ -1.28
SRRM1-215ENST00000488317 AMPD1P23109 780 aa7.06□□□□□ -1.28
SRRM1-215ENST00000488317 EIF6P56537 245 aaKnown RBP7.06□□□□□ -1.28
SRRM1-215ENST00000488317 PTPN11Q06124 597 aaPredicted RBP7.06□□□□□ -1.28
SRRM1-215ENST00000488317 ZNF252P-AS1Q0IIN9 211 aa7.06□□□□□ -1.28
SRRM1-215ENST00000488317 BMS1Q14692 1282 aaKnown RBP7.06□□□□□ -1.28
SRRM1-215ENST00000488317 POU4F3Q15319 338 aa7.06□□□□□ -1.28
SRRM1-215ENST00000488317 ZNF787Q6DD87 383 aa7.06□□□□□ -1.28
SRRM1-215ENST00000488317 REC114Q7Z4M0 266 aa7.06□□□□□ -1.28
SRRM1-215ENST00000488317 WNT8BQ93098 351 aa7.06□□□□□ -1.28
SRRM1-215ENST00000488317 CARD10Q9BWT7 1032 aa7.06□□□□□ -1.28
SRRM1-215ENST00000488317 OSGEPQ9NPF4 335 aa7.06□□□□□ -1.28
SRRM1-215ENST00000488317 PCDHA4Q9UN74 947 aa7.06□□□□□ -1.28
SRRM1-215ENST00000488317 NISCHQ9Y2I1 1504 aa7.06□□□□□ -1.28
SRRM1-215ENST00000488317 FSCN2O14926 492 aa7.05□□□□□ -1.28
SRRM1-215ENST00000488317 MAOBP27338 520 aa7.05□□□□□ -1.28
SRRM1-215ENST00000488317 BAG6P46379 1132 aa7.05□□□□□ -1.28
SRRM1-215ENST00000488317 HNRNPUQ00839 825 aaKnown RBP eCLIP7.05□□□□□ -1.28
SRRM1-215ENST00000488317 RPL6Q02878 288 aaKnown RBP7.05□□□□□ -1.28
SRRM1-215ENST00000488317 PDE3AQ14432 1141 aa7.05□□□□□ -1.28
SRRM1-215ENST00000488317 NBPF6Q5VWK0 638 aa7.05□□□□□ -1.28
SRRM1-215ENST00000488317 MSL1Q68DK7 614 aa7.05□□□□□ -1.28
SRRM1-215ENST00000488317 SCARA3Q6AZY7 606 aa7.05□□□□□ -1.28
SRRM1-215ENST00000488317 C1orf229Q6ZS94 237 aaPredicted RBP7.05□□□□□ -1.28
SRRM1-215ENST00000488317 C8orf86Q6ZUL3 223 aa7.05□□□□□ -1.28
SRRM1-215ENST00000488317 CHSY3Q70JA7 882 aa7.05□□□□□ -1.28
SRRM1-215ENST00000488317 PDZD3Q86UT5 571 aa7.05□□□□□ -1.28
SRRM1-215ENST00000488317 IRF7Q92985 503 aa7.05□□□□□ -1.28
SRRM1-215ENST00000488317 GAL3ST3Q96A11 431 aa7.05□□□□□ -1.28
SRRM1-215ENST00000488317 MRFAP1L1Q96HT8 127 aa7.05□□□□□ -1.28
SRRM1-215ENST00000488317 NBPF4Q96M43 638 aa7.05□□□□□ -1.28
SRRM1-215ENST00000488317 PIF1Q9H611 641 aa7.05□□□□□ -1.28
SRRM1-215ENST00000488317 PRKAG3Q9UGI9 489 aa7.05□□□□□ -1.28
SRRM1-215ENST00000488317 TMA7Q9Y2S6 64 aaKnown RBP7.05□□□□□ -1.28
SRRM1-215ENST00000488317 ERBB4Q15303 1308 aa7.04□□□□□ -1.28
SRRM1-215ENST00000488317 CANXP27824 592 aaKnown RBP7.04□□□□□ -1.28
SRRM1-215ENST00000488317 CLCQ05315 142 aa7.04□□□□□ -1.28
SRRM1-215ENST00000488317 NFE2L2Q16236 605 aa7.04□□□□□ -1.28
SRRM1-215ENST00000488317 GPBAR1Q8TDU6 330 aa7.04□□□□□ -1.28
SRRM1-215ENST00000488317 HNRNPLLQ8WVV9 542 aaKnown RBP7.04□□□□□ -1.28
SRRM1-215ENST00000488317 SHDQ96IW2 340 aa7.04□□□□□ -1.28
SRRM1-215ENST00000488317 BTBD6Q96KE9 485 aa7.04□□□□□ -1.28
SRRM1-215ENST00000488317 USP26Q9BXU7 913 aa7.04□□□□□ -1.28
SRRM1-215ENST00000488317 PCDHB14Q9Y5E9 798 aa7.04□□□□□ -1.28
SRRM1-215ENST00000488317 K7ELQ4 463 aaPredicted RBP7.03□□□□□ -1.28
SRRM1-215ENST00000488317 SMAD7O15105 426 aaKnown RBP7.03□□□□□ -1.28
SRRM1-215ENST00000488317 GRIN3BO60391 1043 aa7.03□□□□□ -1.28
SRRM1-215ENST00000488317 IMPDH2P12268 514 aa7.03□□□□□ -1.28
SRRM1-215ENST00000488317 NLRP12P59046 1061 aa7.03□□□□□ -1.28
SRRM1-215ENST00000488317 TNNI3KQ59H18 835 aa7.03□□□□□ -1.28
SRRM1-215ENST00000488317 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.03□□□□□ -1.28
SRRM1-215ENST00000488317 REXO1Q8N1G1 1221 aaKnown RBP7.03□□□□□ -1.28
SRRM1-215ENST00000488317 KLHL23Q8NBE8 558 aa7.03□□□□□ -1.28
SRRM1-215ENST00000488317 KLHDC7BQ96G42 594 aa7.03□□□□□ -1.28
SRRM1-215ENST00000488317 ECEL1O95672 775 aa7.02□□□□□ -1.29
SRRM1-215ENST00000488317 KRT76Q01546 638 aa7.02□□□□□ -1.29
SRRM1-215ENST00000488317 SUZ12Q15022 739 aaKnown RBP7.02□□□□□ -1.29
SRRM1-215ENST00000488317 DMRTC2Q8IXT2 367 aaPredicted RBP7.02□□□□□ -1.29
SRRM1-215ENST00000488317 ELMO3Q96BJ8 720 aa7.02□□□□□ -1.29
SRRM1-215ENST00000488317 CCDC86Q9H6F5 360 aaKnown RBP7.02□□□□□ -1.29
SRRM1-215ENST00000488317 SIRPGQ9P1W8 387 aa7.02□□□□□ -1.29
SRRM1-215ENST00000488317 CDK11AQ9UQ88 783 aaPredicted RBP7.02□□□□□ -1.29
SRRM1-215ENST00000488317 TLDC2A0PJX2 215 aa7.01□□□□□ -1.29
SRRM1-215ENST00000488317 OIP5O43482 229 aa7.01□□□□□ -1.29
SRRM1-215ENST00000488317 BCRP11274 1271 aa7.01□□□□□ -1.29
SRRM1-215ENST00000488317 LIG1P18858 919 aa7.01□□□□□ -1.29
SRRM1-215ENST00000488317 GIPRP48546 466 aa7.01□□□□□ -1.29
SRRM1-215ENST00000488317 CDK8P49336 464 aa7.01□□□□□ -1.29
SRRM1-215ENST00000488317 RAB33AQ14088 237 aa7.01□□□□□ -1.29
SRRM1-215ENST00000488317 WIPI1Q5MNZ9 446 aaPredicted RBP7.01□□□□□ -1.29
SRRM1-215ENST00000488317 HDXQ7Z353 690 aa7.01□□□□□ -1.29
SRRM1-215ENST00000488317 OR6P1Q8NGX9 317 aa7.01□□□□□ -1.29
SRRM1-215ENST00000488317 SRPK1Q96SB4 655 aaKnown RBP7.01□□□□□ -1.29
SRRM1-215ENST00000488317 KRT82Q9NSB4 513 aa7.01□□□□□ -1.29
SRRM1-215ENST00000488317 ZNRF3Q9ULT6 936 aa7.01□□□□□ -1.29
SRRM1-215ENST00000488317 POLR3KQ9Y2Y1 108 aaPredicted RBP7.01□□□□□ -1.29
SRRM1-215ENST00000488317 CADPSQ9ULU8 1353 aa7□□□□□ -1.29
SRRM1-215ENST00000488317 CCDC85CA6NKD9 419 aa7□□□□□ -1.29
SRRM1-215ENST00000488317 KLF4O43474 513 aa7□□□□□ -1.29
SRRM1-215ENST00000488317 MLECQ14165 292 aa7□□□□□ -1.29
SRRM1-215ENST00000488317 INPP5AQ14642 412 aa7□□□□□ -1.29
SRRM1-215ENST00000488317 PPP2R5EQ16537 467 aa7□□□□□ -1.29
SRRM1-215ENST00000488317 HP1BP3Q5SSJ5 553 aaPredicted RBP7□□□□□ -1.29
SRRM1-215ENST00000488317 TRAPPC3LQ5T215 181 aa7□□□□□ -1.29
SRRM1-215ENST00000488317 MAP4K3Q8IVH8 894 aa7□□□□□ -1.29
SRRM1-215ENST00000488317 PLPPR2Q96GM1 343 aa7□□□□□ -1.29
SRRM1-215ENST00000488317 EHMT1Q9H9B1 1298 aa7□□□□□ -1.29
SRRM1-215ENST00000488317 RAD18Q9NS91 495 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms