RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.18□□□□□ -0.62
SF3B1-211ENST00000487698 MCM5P33992 734 aa11.17□□□□□ -0.62
SF3B1-211ENST00000487698 TDO2P48775 406 aa11.17□□□□□ -0.62
SF3B1-211ENST00000487698 EVCP57679 992 aa11.17□□□□□ -0.62
SF3B1-211ENST00000487698 GIMAP6Q6P9H5 292 aa11.17□□□□□ -0.62
SF3B1-211ENST00000487698 SDR42E1Q8WUS8 393 aa11.17□□□□□ -0.62
SF3B1-211ENST00000487698 RTFDC1Q9BY42 306 aaPredicted RBP11.17□□□□□ -0.62
SF3B1-211ENST00000487698 TACC3Q9Y6A5 838 aa11.17□□□□□ -0.62
SF3B1-211ENST00000487698 NEDD4P46934 1319 aa11.17□□□□□ -0.62
SF3B1-211ENST00000487698 RALYLQ86SE5 291 aaKnown RBP11.17□□□□□ -0.62
SF3B1-211ENST00000487698 NECAB1Q8N987 351 aa11.17□□□□□ -0.62
SF3B1-211ENST00000487698 NKX2-3Q8TAU0 364 aa11.17□□□□□ -0.62
SF3B1-211ENST00000487698 TBC1D22AQ8WUA7 517 aa11.17□□□□□ -0.62
SF3B1-211ENST00000487698 GTF3C6Q969F1 213 aa11.17□□□□□ -0.62
SF3B1-211ENST00000487698 TMX4Q9H1E5 349 aaPredicted RBP11.17□□□□□ -0.62
SF3B1-211ENST00000487698 ANAPC4Q9UJX5 808 aa11.17□□□□□ -0.62
SF3B1-211ENST00000487698 PRC1O43663 620 aa11.16□□□□□ -0.62
SF3B1-211ENST00000487698 BRD1O95696 1058 aa11.16□□□□□ -0.62
SF3B1-211ENST00000487698 GSTO1P78417 241 aa11.16□□□□□ -0.62
SF3B1-211ENST00000487698 MFSD14BQ5SR56 506 aa11.16□□□□□ -0.62
SF3B1-211ENST00000487698 CHST3Q7LGC8 479 aa11.16□□□□□ -0.62
SF3B1-211ENST00000487698 STAG1Q8WVM7 1258 aa11.16□□□□□ -0.62
SF3B1-211ENST00000487698 ZC3H12CQ9C0D7 883 aaKnown RBP11.16□□□□□ -0.62
SF3B1-211ENST00000487698 AATFQ9NY61 560 aaKnown RBP eCLIP11.16□□□□□ -0.62
SF3B1-211ENST00000487698 MROH7-TTC4A0A0A0MT08 1334 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 RIMBP2O15034 1052 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 PFKFB2O60825 505 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 MCM4P33991 863 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 CTDSPL2Q05D32 466 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 PPARAQ07869 468 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 TRDNQ13061 729 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 DIXDC1Q155Q3 683 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 AKNAD1Q5T1N1 836 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 EYA3Q99504 573 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 CRNKL1Q9BZJ0 848 aaKnown RBP11.15□□□□□ -0.62
SF3B1-211ENST00000487698 SMC3Q9UQE7 1217 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 ADAMTSL1Q8N6G6 1762 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 ECM29Q5VYK3 1845 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 PPP4CP60510 307 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 FGD1P98174 961 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 APOBRQ0VD83 1088 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 CC2D2BQ6DHV5 1058 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 CYB5R4Q7L1T6 521 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 ILDR1Q86SU0 546 aaPredicted RBP11.15□□□□□ -0.62
SF3B1-211ENST00000487698 CNNM2Q9H8M5 875 aa11.15□□□□□ -0.62
SF3B1-211ENST00000487698 MYH1P12882 1939 aa11.14□□□□□ -0.63
SF3B1-211ENST00000487698 GAKO14976 1311 aa11.14□□□□□ -0.63
SF3B1-211ENST00000487698 B4E1Z4 1266 aa11.14□□□□□ -0.63
SF3B1-211ENST00000487698 LDHCP07864 332 aa11.14□□□□□ -0.63
SF3B1-211ENST00000487698 GTF2IP78347 998 aa11.14□□□□□ -0.63
SF3B1-211ENST00000487698 ZNF274Q96GC6 653 aaPredicted RBP11.14□□□□□ -0.63
SF3B1-211ENST00000487698 FAM163AQ96GL9 167 aaPredicted RBP11.14□□□□□ -0.63
SF3B1-211ENST00000487698 DCP1AQ9NPI6 582 aaPredicted RBP11.14□□□□□ -0.63
SF3B1-211ENST00000487698 GPHNQ9NQX3 736 aaPredicted RBP11.14□□□□□ -0.63
SF3B1-211ENST00000487698 ATP8A2Q9NTI2 1148 aa11.14□□□□□ -0.63
SF3B1-211ENST00000487698 MKRN1Q9UHC7 482 aaKnown RBP11.14□□□□□ -0.63
SF3B1-211ENST00000487698 SUGT1Q9Y2Z0 365 aa11.14□□□□□ -0.63
SF3B1-211ENST00000487698 KCNA3P22001 575 aa11.14□□□□□ -0.63
SF3B1-211ENST00000487698 GJB2P29033 226 aa11.14□□□□□ -0.63
SF3B1-211ENST00000487698 PDIA3P30101 505 aaKnown RBP11.14□□□□□ -0.63
SF3B1-211ENST00000487698 SCRN1Q12765 414 aa11.14□□□□□ -0.63
SF3B1-211ENST00000487698 STK3Q13188 491 aa11.14□□□□□ -0.63
SF3B1-211ENST00000487698 CTR9Q6PD62 1173 aa11.14□□□□□ -0.63
SF3B1-211ENST00000487698 MFSD6Q6ZSS7 791 aa11.14□□□□□ -0.63
SF3B1-211ENST00000487698 CERS5Q8N5B7 392 aa11.14□□□□□ -0.63
SF3B1-211ENST00000487698 GBP4Q96PP9 640 aa11.14□□□□□ -0.63
SF3B1-211ENST00000487698 KRT23Q9C075 422 aa11.14□□□□□ -0.63
SF3B1-211ENST00000487698 INCENPQ9NQS7 918 aa11.14□□□□□ -0.63
SF3B1-211ENST00000487698 TCHHQ07283 1943 aa11.13□□□□□ -0.63
SF3B1-211ENST00000487698 GPR75-ASB3A0A0A6YYF3 556 aa11.13□□□□□ -0.63
SF3B1-211ENST00000487698 SH2B2O14492 632 aaPredicted RBP11.13□□□□□ -0.63
SF3B1-211ENST00000487698 FGRP09769 529 aa11.13□□□□□ -0.63
SF3B1-211ENST00000487698 DOK7Q18PE1 504 aa11.13□□□□□ -0.63
SF3B1-211ENST00000487698 SBK1Q52WX2 424 aa11.13□□□□□ -0.63
SF3B1-211ENST00000487698 PODNQ7Z5L7 613 aa11.13□□□□□ -0.63
SF3B1-211ENST00000487698 CERS3Q8IU89 383 aa11.13□□□□□ -0.63
SF3B1-211ENST00000487698 MTFR1LQ9H019 292 aa11.13□□□□□ -0.63
SF3B1-211ENST00000487698 RNF41Q9H4P4 317 aaPredicted RBP11.13□□□□□ -0.63
SF3B1-211ENST00000487698 SMIM22K7EJ46 135 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 KDM4AO75164 1064 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 BAG3O95817 575 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 DPEP1P16444 411 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 SYT1P21579 422 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 GRIPAP1Q4V328 841 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 TTLL6Q8N841 843 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 SH3RF3Q8TEJ3 882 aaPredicted RBP11.12□□□□□ -0.63
SF3B1-211ENST00000487698 TMEM87BQ96K49 555 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 LLPHQ9BRT6 129 aaKnown RBP11.12□□□□□ -0.63
SF3B1-211ENST00000487698 ARPP21Q9UBL0 812 aaPredicted RBP11.12□□□□□ -0.63
SF3B1-211ENST00000487698 BRPF3Q9ULD4 1205 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 ANGEL1Q9UNK9 670 aaKnown RBP11.12□□□□□ -0.63
SF3B1-211ENST00000487698 WDR33Q9C0J8 1336 aaKnown RBP11.12□□□□□ -0.63
SF3B1-211ENST00000487698 DDX11L8A8MPP1 907 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 MINDY4BA8MYZ0 360 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 USP17L12C9JPN9 530 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 USP17L21D6R901 530 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 ZBTB7AO95365 584 aa11.12□□□□□ -0.63
SF3B1-211ENST00000487698 BAG4O95429 457 aaKnown RBP11.12□□□□□ -0.63
SF3B1-211ENST00000487698 PCP11498 1178 aaKnown RBP11.12□□□□□ -0.63
SF3B1-211ENST00000487698 BTDP43251 543 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms