RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 F6X3S4 739 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 AP5Z1O43299 807 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 CAVIN2O95810 425 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 CCDC192P0DO97 292 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 SKIP12755 728 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 CDC25BP30305 580 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 PHKA2P46019 1235 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 AK2P54819 239 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 CENPCQ03188 943 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 GABPB1Q06547 395 aaPredicted RBP5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 NCBP1Q09161 790 aaKnown RBP5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 ATP2B3Q16720 1220 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 MAP7D1Q3KQU3 841 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 ESCO1Q5FWF5 840 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 VPS53Q5VIR6 699 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 CCDC30Q5VVM6 783 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 TAF3Q5VWG9 929 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 TSHZ3Q63HK5 1081 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 TMEM214Q6NUQ4 689 aaKnown RBP5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 KANK3Q6NY19 840 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 TAS1R3Q7RTX0 852 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 CNTROBQ8N137 903 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 TDRD7Q8NHU6 1098 aaKnown RBP5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 ZNF830Q96NB3 372 aaPredicted RBP5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 CNTNAP3BQ96NU0 1288 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 ZSCAN10Q96SZ4 725 aaPredicted RBP5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 COL25A1Q9BXS0 654 aaPredicted RBP5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 CNTNAP3Q9BZ76 1288 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 HYPKQ9NX55 129 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 TSPYL4Q9UJ04 414 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 SMC3Q9UQE7 1217 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 CACNA1FO60840 1977 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 MRC1P22897 1456 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 LMTK3Q96Q04 1460 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 KDM3BQ7LBC6 1761 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 SLIT1O75093 1534 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 POM121CA8CG34 1229 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 FIBPO43427 364 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 FAM193AP78312 1265 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 ST3GAL1Q11201 340 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 MTX1Q13505 466 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 TLR1Q15399 786 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 MAP3K11Q16584 847 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 MTHFSDQ2M296 383 aaKnown RBP5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 NBPF10Q6P3W6 841 aaKnown RBP5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 GIMAP6Q6P9H5 292 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 SLC4A10Q6U841 1118 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 PLA2G4DQ86XP0 818 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 CREBRFQ8IUR6 639 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 C17orf53Q8N3J3 647 aaPredicted RBP5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 NBPF15Q8N660 670 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 RILPL2Q969X0 211 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 KIF1BPQ96EK5 621 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 GRIP2Q9C0E4 1043 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 ALDH8A1Q9H2A2 487 aaPredicted RBP5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 TIMMDC1Q9NPL8 285 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 PRDM10Q9NQV6 1147 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 DDX19AQ9NUU7 478 aaKnown RBP5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 CUEDC1Q9NWM3 386 aaPredicted RBP5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 OGFRQ9NZT2 677 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 CGNQ9P2M7 1197 aaKnown RBP5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 LRRFIP2Q9Y608 721 aaKnown RBP5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 MRVI1Q9Y6F6 885 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 DNMT3AQ9Y6K1 912 aaPredicted RBP5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 PIK3C2AO00443 1686 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 ADAMTS13Q76LX8 1427 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 DIP2BQ9P265 1576 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 ROBO2Q9HCK4 1378 aa5.55□□□□□ -1.52
SMARCC1-206ENST00000485737 MARF1Q9Y4F3 1742 aaKnown RBP5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 NPHP3Q7Z494 1330 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 GLRX3O76003 335 aaKnown RBP5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 LARGE1O95461 756 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 HOXB7P09629 217 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 UBTFL1P0CB47 393 aaPredicted RBP5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 PDCP20941 246 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 GJB2P29033 226 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 ZNF75DP51815 510 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 KRT85P78386 507 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 PSME1Q06323 249 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 TYRO3Q06418 890 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 EML3Q32P44 896 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 HSP90AB4PQ58FF6 505 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 GNASQ5JWF2 1037 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 SARM1Q6SZW1 724 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 NOL8Q76FK4 1167 aaKnown RBP5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 RHPN1Q8TCX5 695 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 RUFY2Q8WXA3 655 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 NANOS1Q8WY41 292 aaKnown RBP5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 JARID2Q92833 1246 aaPredicted RBP5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 XAGE2Q96GT9 111 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 USP44Q9H0E7 712 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 NUP62CLQ9H1M0 184 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 CLSTN2Q9H4D0 955 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 ALG2Q9H553 416 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 ETNK1Q9HBU6 452 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 GPAMQ9HCL2 828 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 KCND1Q9NSA2 647 aa5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 ZHX1Q9UKY1 873 aaPredicted RBP5.54□□□□□ -1.52
SMARCC1-206ENST00000485737 PAXBP1Q9Y5B6 917 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms