RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 DIP2AQ14689 1571 aa12.96□□□□□ -0.34
SMPD4-218ENST00000482171 SPATA31D1Q6ZQQ2 1576 aa12.96□□□□□ -0.34
SMPD4-218ENST00000482171 BRD1O95696 1058 aa12.95□□□□□ -0.34
SMPD4-218ENST00000482171 HLA-DOAP06340 250 aa12.95□□□□□ -0.34
SMPD4-218ENST00000482171 CYP21A2P08686 494 aa12.95□□□□□ -0.34
SMPD4-218ENST00000482171 CHRNDQ07001 517 aa12.95□□□□□ -0.34
SMPD4-218ENST00000482171 STX1AQ16623 288 aa12.95□□□□□ -0.34
SMPD4-218ENST00000482171 SMIM5Q71RC9 77 aa12.95□□□□□ -0.34
SMPD4-218ENST00000482171 CPLX3Q8WVH0 158 aa12.95□□□□□ -0.34
SMPD4-218ENST00000482171 MAP4K1Q92918 833 aa12.95□□□□□ -0.34
SMPD4-218ENST00000482171 PARP3Q9Y6F1 533 aa12.95□□□□□ -0.34
SMPD4-218ENST00000482171 NEMFO60524 1076 aa12.95□□□□□ -0.34
SMPD4-218ENST00000482171 EIF3JO75822 258 aaKnown RBP12.95□□□□□ -0.34
SMPD4-218ENST00000482171 MSL1Q68DK7 614 aa12.95□□□□□ -0.34
SMPD4-218ENST00000482171 CMTR1Q8N1G2 835 aaKnown RBP12.95□□□□□ -0.34
SMPD4-218ENST00000482171 KCNG4Q8TDN1 519 aa12.95□□□□□ -0.34
SMPD4-218ENST00000482171 TM6SF1Q9BZW5 370 aa12.95□□□□□ -0.34
SMPD4-218ENST00000482171 ERLIN1O75477 346 aa12.95□□□□□ -0.34
SMPD4-218ENST00000482171 UBA7P41226 1012 aa12.95□□□□□ -0.34
SMPD4-218ENST00000482171 ZSWIM4Q9H7M6 989 aa12.95□□□□□ -0.34
SMPD4-218ENST00000482171 OGFRQ9NZT2 677 aa12.95□□□□□ -0.34
SMPD4-218ENST00000482171 TECPR2O15040 1411 aa12.95□□□□□ -0.34
SMPD4-218ENST00000482171 EIF6P56537 245 aaKnown RBP12.94□□□□□ -0.34
SMPD4-218ENST00000482171 FEZ1Q99689 392 aa12.94□□□□□ -0.34
SMPD4-218ENST00000482171 ZSWIM6Q9HCJ5 1215 aa12.94□□□□□ -0.34
SMPD4-218ENST00000482171 SRP68Q9UHB9 627 aaKnown RBP12.94□□□□□ -0.34
SMPD4-218ENST00000482171 IDEP14735 1019 aa12.94□□□□□ -0.34
SMPD4-218ENST00000482171 CBFA2T2O43439 604 aa12.94□□□□□ -0.34
SMPD4-218ENST00000482171 HMGB2P26583 209 aaKnown RBP12.94□□□□□ -0.34
SMPD4-218ENST00000482171 FAM193AP78312 1265 aa12.94□□□□□ -0.34
SMPD4-218ENST00000482171 TEX11Q8IYF3 940 aa12.94□□□□□ -0.34
SMPD4-218ENST00000482171 DSCC1Q9BVC3 393 aa12.94□□□□□ -0.34
SMPD4-218ENST00000482171 BMP2KQ9NSY1 1161 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-218ENST00000482171 SSH2Q76I76 1423 aa12.94□□□□□ -0.34
SMPD4-218ENST00000482171 H7C1W4 665 aa12.93□□□□□ -0.34
SMPD4-218ENST00000482171 KCNQ2O43526 872 aa12.93□□□□□ -0.34
SMPD4-218ENST00000482171 PLCD3Q8N3E9 789 aa12.93□□□□□ -0.34
SMPD4-218ENST00000482171 SMARCE1Q969G3 411 aa12.93□□□□□ -0.34
SMPD4-218ENST00000482171 FAM196AQ6ZSG2 479 aa12.93□□□□□ -0.34
SMPD4-218ENST00000482171 NRKQ7Z2Y5 1582 aa12.93□□□□□ -0.34
SMPD4-218ENST00000482171 MAP2P11137 1827 aaKnown RBP12.93□□□□□ -0.34
SMPD4-218ENST00000482171 ADD1P35611 737 aaKnown RBP12.93□□□□□ -0.34
SMPD4-218ENST00000482171 LMAN1P49257 510 aa12.93□□□□□ -0.34
SMPD4-218ENST00000482171 SUSD4Q5VX71 490 aa12.93□□□□□ -0.34
SMPD4-218ENST00000482171 APBA3O96018 575 aa12.93□□□□□ -0.34
SMPD4-218ENST00000482171 TTLL11Q8NHH1 800 aa12.93□□□□□ -0.34
SMPD4-218ENST00000482171 TSPYL1Q9H0U9 437 aa12.93□□□□□ -0.34
SMPD4-218ENST00000482171 VGLL3A8MV65 326 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 USP17L12C9JPN9 530 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 USP17L21D6R901 530 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 LARGE1O95461 756 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 DNAI1Q9UI46 699 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 GGA1Q9UJY5 639 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 V9GY48 417 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-218ENST00000482171 MAST3O60307 1309 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 TRIM37O94972 964 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 SLU7O95391 586 aaKnown RBP12.92□□□□□ -0.34
SMPD4-218ENST00000482171 GSDMDP57764 484 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 ERFEQ4G0M1 354 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 FAM47AQ5JRC9 791 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 SPECC1Q5M775 1068 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 RBM26Q5T8P6 1007 aaKnown RBP12.92□□□□□ -0.34
SMPD4-218ENST00000482171 MAPKAPK5Q8IW41 473 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 AOPEPQ8N6M6 819 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 OSBP2Q969R2 916 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 CABP5Q9NP86 173 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 TRIM75PA6NK02 468 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 TOP1P11387 765 aaKnown RBP12.92□□□□□ -0.34
SMPD4-218ENST00000482171 LMOD1P29536 600 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-218ENST00000482171 GTF3C6Q969F1 213 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 DHX58Q96C10 678 aa12.92□□□□□ -0.34
SMPD4-218ENST00000482171 NAPAP54920 295 aa12.91□□□□□ -0.34
SMPD4-218ENST00000482171 EIF5P55010 431 aaKnown RBP12.91□□□□□ -0.34
SMPD4-218ENST00000482171 DEF6Q9H4E7 631 aa12.91□□□□□ -0.34
SMPD4-218ENST00000482171 KCNJ14Q9UNX9 436 aa12.91□□□□□ -0.34
SMPD4-218ENST00000482171 ARHGEF28Q8N1W1 1705 aaKnown RBP12.91□□□□□ -0.34
SMPD4-218ENST00000482171 ZNF397Q8NF99 534 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-218ENST00000482171 RBM17Q96I25 401 aaKnown RBP12.91□□□□□ -0.34
SMPD4-218ENST00000482171 TMEM87BQ96K49 555 aa12.91□□□□□ -0.34
SMPD4-218ENST00000482171 UBA5Q9GZZ9 404 aa12.91□□□□□ -0.34
SMPD4-218ENST00000482171 QTRT2Q9H974 415 aaKnown RBP12.91□□□□□ -0.34
SMPD4-218ENST00000482171 VEZTQ9HBM0 779 aa12.91□□□□□ -0.34
SMPD4-218ENST00000482171 NCAPD2Q15021 1401 aa12.91□□□□□ -0.34
SMPD4-218ENST00000482171 ZSCAN12O43309 604 aa12.91□□□□□ -0.34
SMPD4-218ENST00000482171 CAVIN2O95810 425 aa12.91□□□□□ -0.34
SMPD4-218ENST00000482171 ARHGAP29Q52LW3 1261 aa12.91□□□□□ -0.34
SMPD4-218ENST00000482171 IFNL3Q8IZI9 196 aa12.91□□□□□ -0.34
SMPD4-218ENST00000482171 LEO1Q8WVC0 666 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-218ENST00000482171 TCP11L1Q9NUJ3 509 aa12.91□□□□□ -0.34
SMPD4-218ENST00000482171 CEP170BQ9Y4F5 1589 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-218ENST00000482171 MTX1Q13505 466 aa12.91□□□□□ -0.34
SMPD4-218ENST00000482171 ZMYM1Q5SVZ6 1142 aa12.91□□□□□ -0.34
SMPD4-218ENST00000482171 PLIN2Q99541 437 aa12.91□□□□□ -0.34
SMPD4-218ENST00000482171 PUS7LQ9H0K6 701 aaKnown RBP12.91□□□□□ -0.34
SMPD4-218ENST00000482171 MTMR6Q9Y217 621 aa12.91□□□□□ -0.34
SMPD4-218ENST00000482171 M0R2C6 588 aa12.9□□□□□ -0.34
SMPD4-218ENST00000482171 CHGBP05060 677 aa12.9□□□□□ -0.34
SMPD4-218ENST00000482171 ZNHIT6Q9NWK9 470 aaKnown RBP12.9□□□□□ -0.34
SMPD4-218ENST00000482171 MCM7P33993 719 aa12.9□□□□□ -0.34
SMPD4-218ENST00000482171 AKNAD1Q5T1N1 836 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms