RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 PRO3102Q9H379 93 aa16.91■□□□□ 0.3
NDC1-202ENST00000480952 ZBTB7BO15156 539 aaPredicted RBP16.9■□□□□ 0.3
NDC1-202ENST00000480952 VAMP4O75379 141 aa16.9■□□□□ 0.3
NDC1-202ENST00000480952 FKBP1CQ5VVH2 108 aa16.9■□□□□ 0.3
NDC1-202ENST00000480952 MRIQ9BWK5 157 aa16.9■□□□□ 0.3
NDC1-202ENST00000480952 FARP2O94887 1054 aaPredicted RBP16.89■□□□□ 0.29
NDC1-202ENST00000480952 INPP5BP32019 993 aa16.89■□□□□ 0.29
NDC1-202ENST00000480952 FCGRTP55899 365 aa16.89■□□□□ 0.29
NDC1-202ENST00000480952 APOBEC3HQ6NTF7 200 aaKnown RBP16.89■□□□□ 0.29
NDC1-202ENST00000480952 U2AF1L4Q8WU68 220 aaKnown RBP16.89■□□□□ 0.29
NDC1-202ENST00000480952 IL16Q14005 1332 aa16.89■□□□□ 0.29
NDC1-202ENST00000480952 MROH5Q6ZUA9 1318 aa16.89■□□□□ 0.29
NDC1-202ENST00000480952 ZSWIM8A7E2V4 1837 aa16.89■□□□□ 0.29
NDC1-202ENST00000480952 EVI5O60447 810 aa16.88■□□□□ 0.29
NDC1-202ENST00000480952 PRKCZQ05513 592 aa16.88■□□□□ 0.29
NDC1-202ENST00000480952 SLAIN1Q8ND83 568 aa16.88■□□□□ 0.29
NDC1-202ENST00000480952 PARK7Q99497 189 aaKnown RBP16.88■□□□□ 0.29
NDC1-202ENST00000480952 KCNH4Q9UQ05 1017 aa16.88■□□□□ 0.29
NDC1-202ENST00000480952 MAST3O60307 1309 aa16.88■□□□□ 0.29
NDC1-202ENST00000480952 SGPL1O95470 568 aa16.87■□□□□ 0.29
NDC1-202ENST00000480952 UNC93B1Q9H1C4 597 aa16.87■□□□□ 0.29
NDC1-202ENST00000480952 ADGRA2Q96PE1 1338 aa16.87■□□□□ 0.29
NDC1-202ENST00000480952 FANCIQ9NVI1 1328 aa16.87■□□□□ 0.29
NDC1-202ENST00000480952 A0A1W2PPC1 479 aa16.86■□□□□ 0.29
NDC1-202ENST00000480952 TFRCP02786 760 aaKnown RBP16.86■□□□□ 0.29
NDC1-202ENST00000480952 METTL24Q5JXM2 366 aa16.86■□□□□ 0.29
NDC1-202ENST00000480952 SLC4A10Q6U841 1118 aa16.86■□□□□ 0.29
NDC1-202ENST00000480952 HHIPL2Q6UWX4 724 aa16.86■□□□□ 0.29
NDC1-202ENST00000480952 FAM151AQ8WW52 585 aa16.86■□□□□ 0.29
NDC1-202ENST00000480952 SUGT1Q9Y2Z0 365 aa16.86■□□□□ 0.29
NDC1-202ENST00000480952 ARAP2Q8WZ64 1704 aa16.86■□□□□ 0.29
NDC1-202ENST00000480952 A0A1B0GUL6 1792 aa16.86■□□□□ 0.29
NDC1-202ENST00000480952 ALDH1L1O75891 902 aa16.85■□□□□ 0.29
NDC1-202ENST00000480952 CYP2C8P10632 490 aa16.85■□□□□ 0.29
NDC1-202ENST00000480952 BCAMP50895 628 aa16.85■□□□□ 0.29
NDC1-202ENST00000480952 EXOSC9Q06265 439 aaKnown RBP16.85■□□□□ 0.29
NDC1-202ENST00000480952 SUCLG2Q96I99 432 aa16.85■□□□□ 0.29
NDC1-202ENST00000480952 SRCIN1Q9C0H9 1055 aa16.85■□□□□ 0.29
NDC1-202ENST00000480952 STAP2Q9UGK3 403 aa16.85■□□□□ 0.29
NDC1-202ENST00000480952 ZNF112Q9UJU3 913 aa16.85■□□□□ 0.29
NDC1-202ENST00000480952 GABRQQ9UN88 632 aa16.85■□□□□ 0.29
NDC1-202ENST00000480952 A0A0C4DFX4 3053 aa16.84■□□□□ 0.29
NDC1-202ENST00000480952 SOX1O00570 391 aaPredicted RBP16.84■□□□□ 0.29
NDC1-202ENST00000480952 ADCY3O60266 1144 aa16.84■□□□□ 0.29
NDC1-202ENST00000480952 BCRP11274 1271 aa16.84■□□□□ 0.29
NDC1-202ENST00000480952 TCP10Q12799 353 aa16.84■□□□□ 0.29
NDC1-202ENST00000480952 MOGSQ13724 837 aa16.84■□□□□ 0.29
NDC1-202ENST00000480952 LRRC24Q50LG9 513 aa16.84■□□□□ 0.29
NDC1-202ENST00000480952 LRCH3Q96II8 777 aa16.84■□□□□ 0.29
NDC1-202ENST00000480952 RPAP1Q9BWH6 1393 aaPredicted RBP16.84■□□□□ 0.29
NDC1-202ENST00000480952 CXCL11O14625 94 aa16.83■□□□□ 0.28
NDC1-202ENST00000480952 PDE8BO95263 885 aa16.83■□□□□ 0.28
NDC1-202ENST00000480952 GPAT2Q6NUI2 795 aa16.83■□□□□ 0.28
NDC1-202ENST00000480952 KAZALD1Q96I82 304 aa16.83■□□□□ 0.28
NDC1-202ENST00000480952 INHAP05111 366 aa16.82■□□□□ 0.28
NDC1-202ENST00000480952 ELNP15502 786 aa16.82■□□□□ 0.28
NDC1-202ENST00000480952 CAPN2P17655 700 aa16.82■□□□□ 0.28
NDC1-202ENST00000480952 FLT3LGP49771 235 aa16.82■□□□□ 0.28
NDC1-202ENST00000480952 NOL9Q5SY16 702 aaKnown RBP16.82■□□□□ 0.28
NDC1-202ENST00000480952 FASTKD5Q7L8L6 764 aaKnown RBP16.82■□□□□ 0.28
NDC1-202ENST00000480952 DEFB118Q96PH6 123 aa16.82■□□□□ 0.28
NDC1-202ENST00000480952 COL6A3P12111 3177 aa16.81■□□□□ 0.28
NDC1-202ENST00000480952 IFIT1P09914 478 aaKnown RBP16.81■□□□□ 0.28
NDC1-202ENST00000480952 NBPF7P0C2Y1 421 aaPredicted RBP16.81■□□□□ 0.28
NDC1-202ENST00000480952 ZEB1P37275 1124 aaPredicted RBP16.81■□□□□ 0.28
NDC1-202ENST00000480952 CDC42EP5Q6NZY7 148 aa16.81■□□□□ 0.28
NDC1-202ENST00000480952 PXYLP1Q8TE99 480 aa16.81■□□□□ 0.28
NDC1-202ENST00000480952 BICC1Q9H694 974 aaKnown RBP16.81■□□□□ 0.28
NDC1-202ENST00000480952 SALL2Q9Y467 1007 aaPredicted RBP16.81■□□□□ 0.28
NDC1-202ENST00000480952 TNPO2O14787 897 aaKnown RBP16.8■□□□□ 0.28
NDC1-202ENST00000480952 NFIAQ12857 509 aa16.8■□□□□ 0.28
NDC1-202ENST00000480952 NCBP3Q53F19 620 aaKnown RBP16.8■□□□□ 0.28
NDC1-202ENST00000480952 WDR63Q8IWG1 891 aa16.8■□□□□ 0.28
NDC1-202ENST00000480952 VGLL2Q8N8G2 317 aa16.8■□□□□ 0.28
NDC1-202ENST00000480952 WDR66Q8TBY9 1149 aa16.8■□□□□ 0.28
NDC1-202ENST00000480952 PICK1Q9NRD5 415 aa16.8■□□□□ 0.28
NDC1-202ENST00000480952 TAOK2Q9UL54 1235 aa16.8■□□□□ 0.28
NDC1-202ENST00000480952 ZHX2Q9Y6X8 837 aa16.8■□□□□ 0.28
NDC1-202ENST00000480952 IRF5Q13568 498 aa16.79■□□□□ 0.28
NDC1-202ENST00000480952 PUM3Q15397 648 aaKnown RBP16.79■□□□□ 0.28
NDC1-202ENST00000480952 GADL1Q6ZQY3 521 aa16.79■□□□□ 0.28
NDC1-202ENST00000480952 PAWRQ96IZ0 340 aaKnown RBP16.79■□□□□ 0.28
NDC1-202ENST00000480952 USP40Q9NVE5 1235 aa16.79■□□□□ 0.28
NDC1-202ENST00000480952 DAGLAQ9Y4D2 1042 aa16.79■□□□□ 0.28
NDC1-202ENST00000480952 A0A0G2JLL6 359 aaPredicted RBP16.78■□□□□ 0.28
NDC1-202ENST00000480952 MNX1P50219 401 aaPredicted RBP16.78■□□□□ 0.28
NDC1-202ENST00000480952 DIXDC1Q155Q3 683 aa16.78■□□□□ 0.28
NDC1-202ENST00000480952 RABL6Q3YEC7 729 aaPredicted RBP16.78■□□□□ 0.28
NDC1-202ENST00000480952 CCDC184Q52MB2 194 aa16.78■□□□□ 0.28
NDC1-202ENST00000480952 NECAB2Q7Z6G3 386 aa16.78■□□□□ 0.28
NDC1-202ENST00000480952 PRRT2Q7Z6L0 340 aaPredicted RBP16.78■□□□□ 0.28
NDC1-202ENST00000480952 SCYL3Q8IZE3 742 aa16.78■□□□□ 0.28
NDC1-202ENST00000480952 KLHDC4Q8TBB5 520 aa16.78■□□□□ 0.28
NDC1-202ENST00000480952 SMCR8Q8TEV9 937 aaPredicted RBP16.78■□□□□ 0.28
NDC1-202ENST00000480952 PAK6Q9NQU5 681 aaPredicted RBP16.78■□□□□ 0.28
NDC1-202ENST00000480952 FAM198AQ9UFP1 575 aa16.78■□□□□ 0.28
NDC1-202ENST00000480952 LAMA3Q16787 3333 aa16.78■□□□□ 0.28
NDC1-202ENST00000480952 KIF16BQ96L93 1317 aa16.77■□□□□ 0.28
NDC1-202ENST00000480952 PTPRAP18433 802 aa16.77■□□□□ 0.28
NDC1-202ENST00000480952 COA7Q96BR5 231 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms