RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 FMR1Q06787 632 aaKnown RBP eCLIP13.15□□□□□ -0.3
ATG4B-219ENST00000479941 CDC42EP5Q6NZY7 148 aa13.15□□□□□ -0.3
ATG4B-219ENST00000479941 OTUD7AQ8TE49 926 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-219ENST00000479941 CDCA5Q96FF9 252 aa13.15□□□□□ -0.3
ATG4B-219ENST00000479941 CREBZFQ9NS37 354 aa13.15□□□□□ -0.3
ATG4B-219ENST00000479941 USP40Q9NVE5 1235 aa13.15□□□□□ -0.3
ATG4B-219ENST00000479941 SCAF8Q9UPN6 1271 aaKnown RBP13.15□□□□□ -0.3
ATG4B-219ENST00000479941 MYH2Q9UKX2 1941 aa13.14□□□□□ -0.31
ATG4B-219ENST00000479941 BAG3O95817 575 aa13.14□□□□□ -0.31
ATG4B-219ENST00000479941 RASA3Q14644 834 aa13.14□□□□□ -0.31
ATG4B-219ENST00000479941 CST9Q5W186 159 aa13.14□□□□□ -0.31
ATG4B-219ENST00000479941 TSHZ3Q63HK5 1081 aa13.14□□□□□ -0.31
ATG4B-219ENST00000479941 DLK2Q6UY11 383 aa13.14□□□□□ -0.31
ATG4B-219ENST00000479941 FAM83AQ86UY5 434 aa13.14□□□□□ -0.31
ATG4B-219ENST00000479941 PI4K2BQ8TCG2 481 aa13.14□□□□□ -0.31
ATG4B-219ENST00000479941 NOL10Q9BSC4 688 aaKnown RBP13.14□□□□□ -0.31
ATG4B-219ENST00000479941 ZNF408Q9H9D4 720 aa13.14□□□□□ -0.31
ATG4B-219ENST00000479941 STAP2Q9UGK3 403 aa13.14□□□□□ -0.31
ATG4B-219ENST00000479941 TCP10L2B9ZVM9 353 aa13.13□□□□□ -0.31
ATG4B-219ENST00000479941 CYP7A1P22680 504 aa13.13□□□□□ -0.31
ATG4B-219ENST00000479941 NF2P35240 595 aa13.13□□□□□ -0.31
ATG4B-219ENST00000479941 PDE1AP54750 535 aa13.13□□□□□ -0.31
ATG4B-219ENST00000479941 PPP4CP60510 307 aa13.13□□□□□ -0.31
ATG4B-219ENST00000479941 SLC9C2Q5TAH2 1124 aa13.13□□□□□ -0.31
ATG4B-219ENST00000479941 ZSCAN25Q6NSZ9 544 aa13.13□□□□□ -0.31
ATG4B-219ENST00000479941 CERS3Q8IU89 383 aa13.13□□□□□ -0.31
ATG4B-219ENST00000479941 MAGEB6Q8N7X4 407 aa13.13□□□□□ -0.31
ATG4B-219ENST00000479941 EDC3Q96F86 508 aaKnown RBP13.13□□□□□ -0.31
ATG4B-219ENST00000479941 IDI2Q9BXS1 227 aa13.13□□□□□ -0.31
ATG4B-219ENST00000479941 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.13□□□□□ -0.31
ATG4B-219ENST00000479941 MAST2Q6P0Q8 1798 aa13.12□□□□□ -0.31
ATG4B-219ENST00000479941 PLCG2P16885 1265 aa13.12□□□□□ -0.31
ATG4B-219ENST00000479941 CACNB3P54284 484 aa13.12□□□□□ -0.31
ATG4B-219ENST00000479941 RHBDL3P58872 404 aa13.12□□□□□ -0.31
ATG4B-219ENST00000479941 FKBP1BP68106 108 aa13.12□□□□□ -0.31
ATG4B-219ENST00000479941 SUPT20HL1Q3ZLR7 823 aa13.12□□□□□ -0.31
ATG4B-219ENST00000479941 PRAMEF18Q5VWM3 479 aa13.12□□□□□ -0.31
ATG4B-219ENST00000479941 ERICH6BQ5W0A0 696 aa13.12□□□□□ -0.31
ATG4B-219ENST00000479941 C2orf69Q8N8R5 385 aa13.12□□□□□ -0.31
ATG4B-219ENST00000479941 GBA2Q9HCG7 927 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-219ENST00000479941 AATFQ9NY61 560 aaKnown RBP eCLIP13.12□□□□□ -0.31
ATG4B-219ENST00000479941 TRPM7Q96QT4 1865 aa13.12□□□□□ -0.31
ATG4B-219ENST00000479941 DOCK2Q92608 1830 aa13.11□□□□□ -0.31
ATG4B-219ENST00000479941 ENTPD3O75355 529 aa13.11□□□□□ -0.31
ATG4B-219ENST00000479941 NPM3O75607 178 aaKnown RBP13.11□□□□□ -0.31
ATG4B-219ENST00000479941 PDE6AP16499 860 aa13.11□□□□□ -0.31
ATG4B-219ENST00000479941 NFIAQ12857 509 aa13.11□□□□□ -0.31
ATG4B-219ENST00000479941 ADGRA1Q86SQ6 560 aa13.11□□□□□ -0.31
ATG4B-219ENST00000479941 KBTBD3Q8NAB2 608 aa13.11□□□□□ -0.31
ATG4B-219ENST00000479941 FAM151AQ8WW52 585 aa13.11□□□□□ -0.31
ATG4B-219ENST00000479941 TMEM39BQ9GZU3 492 aa13.11□□□□□ -0.31
ATG4B-219ENST00000479941 OSBPL3Q9H4L5 887 aa13.11□□□□□ -0.31
ATG4B-219ENST00000479941 TLL2Q9Y6L7 1015 aa13.11□□□□□ -0.31
ATG4B-219ENST00000479941 ZNF532Q9HCE3 1301 aa13.11□□□□□ -0.31
ATG4B-219ENST00000479941 MYO5AQ9Y4I1 1855 aaKnown RBP13.1□□□□□ -0.31
ATG4B-219ENST00000479941 CNTNAP1P78357 1384 aa13.1□□□□□ -0.31
ATG4B-219ENST00000479941 RPAP1Q9BWH6 1393 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-219ENST00000479941 WDHD1O75717 1129 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-219ENST00000479941 ADD2P35612 726 aa13.1□□□□□ -0.31
ATG4B-219ENST00000479941 RGS3P49796 1198 aa13.1□□□□□ -0.31
ATG4B-219ENST00000479941 UBE3CQ15386 1083 aa13.1□□□□□ -0.31
ATG4B-219ENST00000479941 LRRFIP1Q32MZ4 808 aaKnown RBP13.1□□□□□ -0.31
ATG4B-219ENST00000479941 NBPF12Q5TAG4 269 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-219ENST00000479941 CENPQQ7L2Z9 268 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-219ENST00000479941 SAPCD2Q86UD0 394 aa13.1□□□□□ -0.31
ATG4B-219ENST00000479941 PLEKHM2Q8IWE5 1019 aa13.1□□□□□ -0.31
ATG4B-219ENST00000479941 HOOK2Q96ED9 719 aa13.1□□□□□ -0.31
ATG4B-219ENST00000479941 TEPSINQ96N21 525 aa13.1□□□□□ -0.31
ATG4B-219ENST00000479941 FAM198AQ9UFP1 575 aa13.1□□□□□ -0.31
ATG4B-219ENST00000479941 ABT1Q9ULW3 272 aaKnown RBP13.1□□□□□ -0.31
ATG4B-219ENST00000479941 RFX7Q2KHR2 1363 aa13.09□□□□□ -0.31
ATG4B-219ENST00000479941 PCNTO95613 3336 aa13.09□□□□□ -0.31
ATG4B-219ENST00000479941 TCRBV5S4A2TA0A5A2 114 aa13.09□□□□□ -0.31
ATG4B-219ENST00000479941 PPP1R12BO60237 982 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-219ENST00000479941 ZFYP08048 801 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-219ENST00000479941 HTRA3P83110 453 aa13.09□□□□□ -0.31
ATG4B-219ENST00000479941 TEX11Q8IYF3 940 aa13.09□□□□□ -0.31
ATG4B-219ENST00000479941 MIGA1Q8NAN2 632 aa13.09□□□□□ -0.31
ATG4B-219ENST00000479941 SH3RF3Q8TEJ3 882 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-219ENST00000479941 HHIPL1Q96JK4 782 aa13.09□□□□□ -0.31
ATG4B-219ENST00000479941 CCDC136Q96JN2 1154 aa13.09□□□□□ -0.31
ATG4B-219ENST00000479941 MAGEB6P1A0A0J9YX57 407 aa13.08□□□□□ -0.32
ATG4B-219ENST00000479941 RASSF10A6NK89 507 aa13.08□□□□□ -0.32
ATG4B-219ENST00000479941 HUNKP57058 714 aa13.08□□□□□ -0.32
ATG4B-219ENST00000479941 TCP10Q12799 353 aa13.08□□□□□ -0.32
ATG4B-219ENST00000479941 PICALMQ13492 652 aa13.08□□□□□ -0.32
ATG4B-219ENST00000479941 TTLL12Q14166 644 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-219ENST00000479941 DEFB115Q30KQ5 88 aa13.08□□□□□ -0.32
ATG4B-219ENST00000479941 TICAM2Q86XR7 235 aa13.08□□□□□ -0.32
ATG4B-219ENST00000479941 EVI5LQ96CN4 794 aa13.08□□□□□ -0.32
ATG4B-219ENST00000479941 RIOK1Q9BRS2 568 aaKnown RBP13.08□□□□□ -0.32
ATG4B-219ENST00000479941 DDX4Q9NQI0 724 aaKnown RBP13.08□□□□□ -0.32
ATG4B-219ENST00000479941 UNCXA6NJT0 531 aa13.07□□□□□ -0.32
ATG4B-219ENST00000479941 RNF113AO15541 343 aaKnown RBP13.07□□□□□ -0.32
ATG4B-219ENST00000479941 PDE4AP27815 886 aa13.07□□□□□ -0.32
ATG4B-219ENST00000479941 DYNLL1P63167 89 aaKnown RBP13.07□□□□□ -0.32
ATG4B-219ENST00000479941 MAP3K11Q16584 847 aa13.07□□□□□ -0.32
ATG4B-219ENST00000479941 ARMC9Q7Z3E5 817 aa13.07□□□□□ -0.32
ATG4B-219ENST00000479941 CDAN1Q8IWY9 1227 aa13.07□□□□□ -0.32
ATG4B-219ENST00000479941 FSD1Q9BTV5 496 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms