RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 ZNF408Q9H9D4 720 aa17.48■□□□□ 0.39
CCNL1-217ENST00000476367 CACNB3P54284 484 aa17.47■□□□□ 0.39
CCNL1-217ENST00000476367 SPDYE2Q495Y8 402 aa17.47■□□□□ 0.39
CCNL1-217ENST00000476367 APOBEC3HQ6NTF7 200 aaKnown RBP17.47■□□□□ 0.39
CCNL1-217ENST00000476367 ZNF70Q9UC06 446 aaPredicted RBP17.47■□□□□ 0.39
CCNL1-217ENST00000476367 MROH7-TTC4A0A0A0MT08 1334 aa17.47■□□□□ 0.39
CCNL1-217ENST00000476367 ERC2O15083 957 aa17.47■□□□□ 0.39
CCNL1-217ENST00000476367 TTC22Q5TAA0 569 aa17.47■□□□□ 0.39
CCNL1-217ENST00000476367 NAA16Q6N069 864 aaPredicted RBP17.47■□□□□ 0.39
CCNL1-217ENST00000476367 ADGRA1Q86SQ6 560 aa17.47■□□□□ 0.39
CCNL1-217ENST00000476367 SLF2Q8IX21 1173 aa17.47■□□□□ 0.39
CCNL1-217ENST00000476367 MRIQ9BWK5 157 aa17.47■□□□□ 0.39
CCNL1-217ENST00000476367 GAKO14976 1311 aa17.46■□□□□ 0.39
CCNL1-217ENST00000476367 CDK5RAP2Q96SN8 1893 aa17.46■□□□□ 0.39
CCNL1-217ENST00000476367 RGS3P49796 1198 aa17.46■□□□□ 0.39
CCNL1-217ENST00000476367 GSTO1P78417 241 aa17.46■□□□□ 0.39
CCNL1-217ENST00000476367 TTF1Q15361 905 aaPredicted RBP17.46■□□□□ 0.39
CCNL1-217ENST00000476367 TMOD2Q9NZR1 351 aa17.46■□□□□ 0.39
CCNL1-217ENST00000476367 TCRBV5S4A2TA0A5A2 114 aa17.45■□□□□ 0.38
CCNL1-217ENST00000476367 TCP10L2B9ZVM9 353 aa17.45■□□□□ 0.38
CCNL1-217ENST00000476367 HSPA6P17066 643 aa17.45■□□□□ 0.38
CCNL1-217ENST00000476367 BTDP43251 543 aa17.45■□□□□ 0.38
CCNL1-217ENST00000476367 PRAMEF18Q5VWM3 479 aa17.45■□□□□ 0.38
CCNL1-217ENST00000476367 CELF2O95319 508 aaKnown RBP17.44■□□□□ 0.38
CCNL1-217ENST00000476367 APLP1P51693 650 aa17.44■□□□□ 0.38
CCNL1-217ENST00000476367 MAP3K12Q12852 859 aa17.44■□□□□ 0.38
CCNL1-217ENST00000476367 CDC42EP5Q6NZY7 148 aa17.44■□□□□ 0.38
CCNL1-217ENST00000476367 MAGEB6Q8N7X4 407 aa17.44■□□□□ 0.38
CCNL1-217ENST00000476367 KBTBD3Q8NAB2 608 aa17.44■□□□□ 0.38
CCNL1-217ENST00000476367 CDCA5Q96FF9 252 aa17.44■□□□□ 0.38
CCNL1-217ENST00000476367 LDHCP07864 332 aa17.43■□□□□ 0.38
CCNL1-217ENST00000476367 SDSP20132 328 aa17.43■□□□□ 0.38
CCNL1-217ENST00000476367 HTRA3P83110 453 aa17.43■□□□□ 0.38
CCNL1-217ENST00000476367 DEFB129Q9H1M3 183 aa17.43■□□□□ 0.38
CCNL1-217ENST00000476367 CYP7A1P22680 504 aa17.43■□□□□ 0.38
CCNL1-217ENST00000476367 TNFAIP1Q13829 316 aa17.43■□□□□ 0.38
CCNL1-217ENST00000476367 NOL10Q9BSC4 688 aaKnown RBP17.43■□□□□ 0.38
CCNL1-217ENST00000476367 USP40Q9NVE5 1235 aa17.43■□□□□ 0.38
CCNL1-217ENST00000476367 FOCADQ5VW36 1801 aa17.43■□□□□ 0.38
CCNL1-217ENST00000476367 RASA3Q14644 834 aa17.42■□□□□ 0.38
CCNL1-217ENST00000476367 FAM163AQ96GL9 167 aaPredicted RBP17.42■□□□□ 0.38
CCNL1-217ENST00000476367 AATFQ9NY61 560 aaKnown RBP eCLIP17.42■□□□□ 0.38
CCNL1-217ENST00000476367 GPR75-ASB3A0A0A6YYF3 556 aa17.41■□□□□ 0.38
CCNL1-217ENST00000476367 TMEM88BA6NKF7 163 aa17.41■□□□□ 0.38
CCNL1-217ENST00000476367 PDE6AP16499 860 aa17.41■□□□□ 0.38
CCNL1-217ENST00000476367 ADD2P35612 726 aa17.41■□□□□ 0.38
CCNL1-217ENST00000476367 TNNI2P48788 182 aa17.41■□□□□ 0.38
CCNL1-217ENST00000476367 SLC9C2Q5TAH2 1124 aa17.41■□□□□ 0.38
CCNL1-217ENST00000476367 MIGA1Q8NAN2 632 aa17.41■□□□□ 0.38
CCNL1-217ENST00000476367 EVI5LQ96CN4 794 aa17.41■□□□□ 0.38
CCNL1-217ENST00000476367 CNTNAP1P78357 1384 aa17.41■□□□□ 0.38
CCNL1-217ENST00000476367 PAPPA2Q9BXP8 1791 aa17.4■□□□□ 0.38
CCNL1-217ENST00000476367 TCP10Q12799 353 aa17.4■□□□□ 0.38
CCNL1-217ENST00000476367 NFIAQ12857 509 aa17.4■□□□□ 0.38
CCNL1-217ENST00000476367 CST9Q5W186 159 aa17.4■□□□□ 0.38
CCNL1-217ENST00000476367 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.4■□□□□ 0.382e-13■□□□□ 8.5
CCNL1-217ENST00000476367 TMEM39BQ9GZU3 492 aa17.4■□□□□ 0.38
CCNL1-217ENST00000476367 SSC5DA1L4H1 1573 aa17.4■□□□□ 0.38
CCNL1-217ENST00000476367 RFX7Q2KHR2 1363 aa17.4■□□□□ 0.38
CCNL1-217ENST00000476367 ZNF532Q9HCE3 1301 aa17.4■□□□□ 0.38
CCNL1-217ENST00000476367 PICALMQ13492 652 aa17.39■□□□□ 0.38
CCNL1-217ENST00000476367 BMP2KLQ5H9B9 411 aa17.39■□□□□ 0.38
CCNL1-217ENST00000476367 CDAN1Q8IWY9 1227 aa17.39■□□□□ 0.38
CCNL1-217ENST00000476367 PPP2R3BQ9Y5P8 575 aa17.39■□□□□ 0.38
CCNL1-217ENST00000476367 IGSF3O75054 1194 aa17.39■□□□□ 0.37
CCNL1-217ENST00000476367 RHBDL3P58872 404 aa17.39■□□□□ 0.37
CCNL1-217ENST00000476367 DYNLL1P63167 89 aaKnown RBP17.39■□□□□ 0.37
CCNL1-217ENST00000476367 SH3RF3Q8TEJ3 882 aaPredicted RBP17.39■□□□□ 0.37
CCNL1-217ENST00000476367 IL25Q9H293 177 aa17.39■□□□□ 0.37
CCNL1-217ENST00000476367 CREBZFQ9NS37 354 aa17.39■□□□□ 0.37
CCNL1-217ENST00000476367 ABT1Q9ULW3 272 aaKnown RBP17.39■□□□□ 0.37
CCNL1-217ENST00000476367 NAV1Q8NEY1 1877 aa17.38■□□□□ 0.37
CCNL1-217ENST00000476367 TRIM6-TRIM34B2RNG4 842 aa17.38■□□□□ 0.37
CCNL1-217ENST00000476367 BAG3O95817 575 aa17.38■□□□□ 0.37
CCNL1-217ENST00000476367 NF2P35240 595 aa17.38■□□□□ 0.37
CCNL1-217ENST00000476367 PRKG1Q13976 671 aa17.38■□□□□ 0.37
CCNL1-217ENST00000476367 NBPF12Q5TAG4 269 aaPredicted RBP17.38■□□□□ 0.37
CCNL1-217ENST00000476367 TEX11Q8IYF3 940 aa17.38■□□□□ 0.37
CCNL1-217ENST00000476367 OSBP2Q969R2 916 aa17.38■□□□□ 0.37
CCNL1-217ENST00000476367 RILPL2Q969X0 211 aa17.38■□□□□ 0.37
CCNL1-217ENST00000476367 SEC62Q99442 399 aaKnown RBP17.38■□□□□ 0.37
CCNL1-217ENST00000476367 PUS7LQ9H0K6 701 aaKnown RBP17.38■□□□□ 0.37
CCNL1-217ENST00000476367 GBA2Q9HCG7 927 aaPredicted RBP17.38■□□□□ 0.37
CCNL1-217ENST00000476367 FAM198AQ9UFP1 575 aa17.38■□□□□ 0.37
CCNL1-217ENST00000476367 OTOFQ9HC10 1997 aa17.38■□□□□ 0.37
CCNL1-217ENST00000476367 WDHD1O75717 1129 aaPredicted RBP17.37■□□□□ 0.37
CCNL1-217ENST00000476367 TTLL12Q14166 644 aaPredicted RBP17.37■□□□□ 0.37
CCNL1-217ENST00000476367 UBE3CQ15386 1083 aa17.37■□□□□ 0.37
CCNL1-217ENST00000476367 FKBP1CQ5VVH2 108 aa17.37■□□□□ 0.37
CCNL1-217ENST00000476367 FAM83AQ86UY5 434 aa17.37■□□□□ 0.37
CCNL1-217ENST00000476367 RIOK1Q9BRS2 568 aaKnown RBP17.37■□□□□ 0.37
CCNL1-217ENST00000476367 FSD1Q9BTV5 496 aa17.37■□□□□ 0.37
CCNL1-217ENST00000476367 DDX4Q9NQI0 724 aaKnown RBP17.37■□□□□ 0.37
CCNL1-217ENST00000476367 FZD1Q9UP38 647 aa17.37■□□□□ 0.37
CCNL1-217ENST00000476367 MYH1P12882 1939 aa17.37■□□□□ 0.37
CCNL1-217ENST00000476367 PCNTO95613 3336 aa17.37■□□□□ 0.37
CCNL1-217ENST00000476367 RNF113AO15541 343 aaKnown RBP17.36■□□□□ 0.37
CCNL1-217ENST00000476367 PLCG2P16885 1265 aa17.36■□□□□ 0.37
CCNL1-217ENST00000476367 POTEDQ86YR6 584 aa17.36■□□□□ 0.37
CCNL1-217ENST00000476367 FAM227BQ96M60 508 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms