RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 RNF40O75150 1001 aa12.05□□□□□ -0.48
ABCF1-205ENST00000475993 IRX1P78414 480 aaPredicted RBP12.05□□□□□ -0.48
ABCF1-205ENST00000475993 KARSQ15046 597 aaKnown RBP12.05□□□□□ -0.48
ABCF1-205ENST00000475993 CPLX2Q6PUV4 134 aaKnown RBP12.05□□□□□ -0.48
ABCF1-205ENST00000475993 AFAP1L1Q8TED9 768 aa12.05□□□□□ -0.48
ABCF1-205ENST00000475993 IRX2Q9BZI1 471 aaPredicted RBP12.05□□□□□ -0.48
ABCF1-205ENST00000475993 VIPAS39Q9H9C1 493 aa12.05□□□□□ -0.48
ABCF1-205ENST00000475993 YEATS4O95619 227 aa12.05□□□□□ -0.48
ABCF1-205ENST00000475993 SYF2O95926 243 aaKnown RBP12.05□□□□□ -0.48
ABCF1-205ENST00000475993 CCT2P78371 535 aaKnown RBP12.05□□□□□ -0.48
ABCF1-205ENST00000475993 PTPN21Q16825 1174 aa12.05□□□□□ -0.48
ABCF1-205ENST00000475993 FSD1Q9BTV5 496 aa12.05□□□□□ -0.48
ABCF1-205ENST00000475993 SBNO1A3KN83 1393 aa12.05□□□□□ -0.48
ABCF1-205ENST00000475993 SHOX2O60902 331 aaPredicted RBP12.04□□□□□ -0.48
ABCF1-205ENST00000475993 USP8P40818 1118 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 LIG3P49916 1009 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 FBXW10Q5XX13 1052 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 CLIC6Q96NY7 704 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 DESI2Q9BSY9 194 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 POLR3EQ9NVU0 708 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 CLIC4Q9Y696 253 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 COL15A1P39059 1388 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 CEP170BQ9Y4F5 1589 aaPredicted RBP12.04□□□□□ -0.48
ABCF1-205ENST00000475993 ELF1P32519 619 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 AP1ARQ63HQ0 302 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 SEC62Q99442 399 aaKnown RBP12.04□□□□□ -0.48
ABCF1-205ENST00000475993 KDRP35968 1356 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 C21orf2O43822 256 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 CCDC175P0C221 793 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 GUCY1B3Q02153 619 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 STK38Q15208 465 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 SF3A1Q15459 793 aaKnown RBP12.04□□□□□ -0.48
ABCF1-205ENST00000475993 ISM2Q6H9L7 571 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 CTCFLQ8NI51 663 aaPredicted RBP12.04□□□□□ -0.48
ABCF1-205ENST00000475993 N4BP2L2Q92802 583 aaPredicted RBP12.04□□□□□ -0.48
ABCF1-205ENST00000475993 THOC1Q96FV9 657 aaKnown RBP12.04□□□□□ -0.48
ABCF1-205ENST00000475993 PAIP2Q9BPZ3 127 aaKnown RBP12.04□□□□□ -0.48
ABCF1-205ENST00000475993 VEZTQ9HBM0 779 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 FANCLQ9NW38 375 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 ETAA1Q9NY74 926 aa12.04□□□□□ -0.48
ABCF1-205ENST00000475993 CPSF2Q9P2I0 782 aaKnown RBP12.04□□□□□ -0.48
ABCF1-205ENST00000475993 RIMBP3CA6NJZ7 1639 aa12.03□□□□□ -0.48
ABCF1-205ENST00000475993 RIMBP3BA6NNM3 1639 aa12.03□□□□□ -0.48
ABCF1-205ENST00000475993 RIMBP3Q9UFD9 1639 aa12.03□□□□□ -0.48
ABCF1-205ENST00000475993 ANKRD33BA6NCL7 494 aa12.03□□□□□ -0.48
ABCF1-205ENST00000475993 SPTLC2O15270 562 aa12.03□□□□□ -0.48
ABCF1-205ENST00000475993 RHOXF2BP0C7M4 288 aa12.03□□□□□ -0.48
ABCF1-205ENST00000475993 CMA1P23946 247 aa12.03□□□□□ -0.48
ABCF1-205ENST00000475993 ADKP55263 362 aaKnown RBP12.03□□□□□ -0.48
ABCF1-205ENST00000475993 TBC1D8BQ0IIM8 1120 aa12.03□□□□□ -0.48
ABCF1-205ENST00000475993 HDGFL1Q5TGJ6 251 aa12.03□□□□□ -0.48
ABCF1-205ENST00000475993 SPECC1LQ69YQ0 1117 aa12.03□□□□□ -0.48
ABCF1-205ENST00000475993 WDR93Q6P2C0 686 aa12.03□□□□□ -0.48
ABCF1-205ENST00000475993 NUDT16Q96DE0 195 aaKnown RBP12.03□□□□□ -0.48
ABCF1-205ENST00000475993 FAM210AQ96ND0 272 aa12.03□□□□□ -0.48
ABCF1-205ENST00000475993 RHOXF2Q9BQY4 288 aa12.03□□□□□ -0.48
ABCF1-205ENST00000475993 A1CFQ9NQ94 594 aaKnown RBP12.03□□□□□ -0.48
ABCF1-205ENST00000475993 PA2G4Q9UQ80 394 aaKnown RBP12.03□□□□□ -0.48
ABCF1-205ENST00000475993 PFKFB1P16118 471 aa12.03□□□□□ -0.48
ABCF1-205ENST00000475993 TAF7Q15545 349 aaPredicted RBP12.03□□□□□ -0.48
ABCF1-205ENST00000475993 TATDN2Q93075 761 aa12.03□□□□□ -0.48
ABCF1-205ENST00000475993 EAF2Q96CJ1 260 aaPredicted RBP12.03□□□□□ -0.48
ABCF1-205ENST00000475993 TACO1Q9BSH4 297 aaKnown RBP12.03□□□□□ -0.48
ABCF1-205ENST00000475993 LRRC2Q9BYS8 371 aa12.03□□□□□ -0.48
ABCF1-205ENST00000475993 OVOS2A0A0J9YW53 1432 aa12.02□□□□□ -0.48
ABCF1-205ENST00000475993 NCAPD2Q15021 1401 aa12.02□□□□□ -0.48
ABCF1-205ENST00000475993 OVOS2Q6IE36 1432 aa12.02□□□□□ -0.48
ABCF1-205ENST00000475993 CYP21A2P08686 494 aa12.02□□□□□ -0.48
ABCF1-205ENST00000475993 ARMC3Q5W041 872 aa12.02□□□□□ -0.48
ABCF1-205ENST00000475993 ARHGEF25Q86VW2 580 aa12.02□□□□□ -0.48
ABCF1-205ENST00000475993 FMNL3Q8IVF7 1028 aa12.02□□□□□ -0.48
ABCF1-205ENST00000475993 PDILTQ8N807 584 aa12.02□□□□□ -0.48
ABCF1-205ENST00000475993 AGXT2Q9BYV1 514 aa12.02□□□□□ -0.48
ABCF1-205ENST00000475993 BOLA2Q9H3K6 86 aa12.02□□□□□ -0.48
ABCF1-205ENST00000475993 C19orf44Q9H6X5 657 aa12.02□□□□□ -0.48
ABCF1-205ENST00000475993 BABAM1Q9NWV8 329 aa12.02□□□□□ -0.48
ABCF1-205ENST00000475993 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.02□□□□□ -0.48
ABCF1-205ENST00000475993 CCDC61Q9Y6R9 512 aa12.02□□□□□ -0.48
ABCF1-205ENST00000475993 FAM169AQ9Y6X4 670 aa12.02□□□□□ -0.48
ABCF1-205ENST00000475993 CDHR2Q9BYE9 1310 aa12.02□□□□□ -0.49
ABCF1-205ENST00000475993 NCKAP5LQ9HCH0 1330 aa12.02□□□□□ -0.49
ABCF1-205ENST00000475993 CARMIL3Q8ND23 1372 aa12.02□□□□□ -0.49
ABCF1-205ENST00000475993 IBSPP21815 317 aaPredicted RBP12.02□□□□□ -0.49
ABCF1-205ENST00000475993 CCNHP51946 323 aaPredicted RBP12.02□□□□□ -0.49
ABCF1-205ENST00000475993 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.02□□□□□ -0.49
ABCF1-205ENST00000475993 U3KPZ7 1027 aaPredicted RBP12.02□□□□□ -0.49
ABCF1-205ENST00000475993 ZC3H4Q9UPT8 1303 aaKnown RBP12.02□□□□□ -0.49
ABCF1-205ENST00000475993 KIF5CO60282 957 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 SASH1O94885 1247 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 ERCC3P19447 782 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 NEDD9Q14511 834 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 MTF1Q14872 753 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 TEX11Q8IYF3 940 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 TRIM6Q9C030 488 aaPredicted RBP12.01□□□□□ -0.49
ABCF1-205ENST00000475993 LZTFL1Q9NQ48 299 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 ADGRG1Q9Y653 693 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 CTAGE15A4D2H0 777 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 HMGB1P09429 215 aaKnown RBP12.01□□□□□ -0.49
ABCF1-205ENST00000475993 CTAGE8P0CG41 777 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 ADCY2Q08462 1091 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms