RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 GOLGA6L4A6NEF3 574 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 H0YC42 278 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 IFRD1O00458 451 aaPredicted RBP4.38□□□□□ -1.71
LSM2-211ENST00000475835 ATP8B1O43520 1251 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 PYGLP06737 847 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 FESP07332 822 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 RPSAP08865 295 aaKnown RBP4.38□□□□□ -1.71
LSM2-211ENST00000475835 DESP17661 470 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 MCM3P25205 808 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 GCKP35557 465 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 TNNI2P48788 182 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 TPD52P55327 224 aaPredicted RBP4.38□□□□□ -1.71
LSM2-211ENST00000475835 ZBED6P86452 979 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 MECOMQ03112 1051 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 LMNB2Q03252 620 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 RAPGEF1Q13905 1077 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 RASA2Q15283 850 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 PTPN14Q15678 1187 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 VPS72Q15906 364 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 INAQ16352 499 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 CCDC14Q49A88 953 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 CCDC38Q502W7 563 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 LRRC23Q53EV4 343 aaPredicted RBP4.38□□□□□ -1.71
LSM2-211ENST00000475835 EMC10Q5UCC4 262 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 ISM2Q6H9L7 571 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 OLFML1Q6UWY5 402 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 ARMC9Q7Z3E5 817 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 ARHGAP22Q7Z5H3 698 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 CEP57Q86XR8 500 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 LURAP1LQ8IV03 231 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 WDR63Q8IWG1 891 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 TTC39CQ8N584 583 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 SLC43A3Q8NBI5 491 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 MSANTD4Q8NCY6 345 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 C3orf20Q8ND61 904 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 TRIM58Q8NG06 486 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 RASSF8Q8NHQ8 419 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 BRSK1Q8TDC3 778 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 HELQQ8TDG4 1101 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 ZFAND2BQ8WV99 257 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 JARID2Q92833 1246 aaPredicted RBP4.38□□□□□ -1.71
LSM2-211ENST00000475835 TBC1D31Q96DN5 1066 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 SAAL1Q96ER3 474 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 PAWRQ96IZ0 340 aaKnown RBP4.38□□□□□ -1.71
LSM2-211ENST00000475835 EPSTI1Q96J88 318 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 SLC7A5P2Q9GIP4 190 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 BRD8Q9H0E9 1235 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 MRPL46Q9H2W6 279 aaKnown RBP4.38□□□□□ -1.71
LSM2-211ENST00000475835 EPB41L4AQ9HCS5 686 aaPredicted RBP4.38□□□□□ -1.71
LSM2-211ENST00000475835 UBAP1Q9NZ09 502 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 STIM2Q9P246 746 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 ANKIB1Q9P2G1 1089 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 ZNF69Q9UC07 566 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 CFDP1Q9UEE9 299 aaPredicted RBP4.38□□□□□ -1.71
LSM2-211ENST00000475835 CROTQ9UKG9 612 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 GTF3C4Q9UKN8 822 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 PRR12Q9ULL5 1215 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 TRPC6Q9Y210 931 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 COG6Q9Y2V7 657 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 CCDC171Q6TFL3 1326 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 ATXN2Q99700 1313 aaKnown RBP4.38□□□□□ -1.71
LSM2-211ENST00000475835 SHROOM2Q13796 1616 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 TRPM1Q7Z4N2 1603 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 EIF2AK4Q9P2K8 1649 aaKnown RBP4.38□□□□□ -1.71
LSM2-211ENST00000475835 KIF15Q9NS87 1388 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 ABCC5O15440 1437 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 PPIP5K1Q6PFW1 1433 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 SPATA31E1Q6ZUB1 1445 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 NCOA3Q9Y6Q9 1424 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 ADGRL2O95490 1459 aa4.37□□□□□ -1.71
LSM2-211ENST00000475835 LAMC1P11047 1609 aa4.37□□□□□ -1.71
LSM2-211ENST00000475835 CCDC163A0A0D9SF12 145 aa4.37□□□□□ -1.71
LSM2-211ENST00000475835 A0A1W2PRQ8 180 aa4.37□□□□□ -1.71
LSM2-211ENST00000475835 EIF3FO00303 357 aaPredicted RBP4.37□□□□□ -1.71
LSM2-211ENST00000475835 FOXN3O00409 490 aaPredicted RBP4.37□□□□□ -1.71
LSM2-211ENST00000475835 KIF3BO15066 747 aa4.37□□□□□ -1.71
LSM2-211ENST00000475835 DIAPH1O60610 1272 aaKnown RBP4.37□□□□□ -1.71
LSM2-211ENST00000475835 ATP6V1G1O75348 118 aa4.37□□□□□ -1.71
LSM2-211ENST00000475835 LDHAP00338 332 aaKnown RBP4.37□□□□□ -1.71
LSM2-211ENST00000475835 IDEP14735 1019 aa4.37□□□□□ -1.71
LSM2-211ENST00000475835 ZNF16P17020 682 aaPredicted RBP4.37□□□□□ -1.71
LSM2-211ENST00000475835 RRM1P23921 792 aa4.37□□□□□ -1.71
LSM2-211ENST00000475835 HOXC13P31276 330 aa4.37□□□□□ -1.71
LSM2-211ENST00000475835 GNL1P36915 607 aaPredicted RBP4.37□□□□□ -1.71
LSM2-211ENST00000475835 GCLCP48506 637 aaPredicted RBP4.37□□□□□ -1.71
LSM2-211ENST00000475835 FNTAP49354 379 aa4.37□□□□□ -1.71
LSM2-211ENST00000475835 CCNHP51946 323 aaPredicted RBP4.37□□□□□ -1.71
LSM2-211ENST00000475835 ZNF445P59923 1031 aa4.37□□□□□ -1.71
LSM2-211ENST00000475835 UBXN2AP68543 259 aa4.37□□□□□ -1.71
LSM2-211ENST00000475835 NCBP1Q09161 790 aaKnown RBP4.37□□□□□ -1.71
LSM2-211ENST00000475835 E2F4Q16254 413 aa4.37□□□□□ -1.71
LSM2-211ENST00000475835 FAM133BQ5BKY9 247 aaKnown RBP4.37□□□□□ -1.71
LSM2-211ENST00000475835 RNF187Q5TA31 235 aaPredicted RBP4.37□□□□□ -1.71
LSM2-211ENST00000475835 NUGGCQ68CJ6 796 aa4.37□□□□□ -1.71
LSM2-211ENST00000475835 CDCA2Q69YH5 1023 aaPredicted RBP4.37□□□□□ -1.71
LSM2-211ENST00000475835 CCSAPQ6IQ19 270 aaPredicted RBP4.37□□□□□ -1.71
LSM2-211ENST00000475835 DPY19L2Q6NUT2 758 aa4.37□□□□□ -1.71
LSM2-211ENST00000475835 IRGCQ6NXR0 463 aa4.37□□□□□ -1.71
LSM2-211ENST00000475835 PDXDC1Q6P996 788 aa4.37□□□□□ -1.71
LSM2-211ENST00000475835 CLEC17AQ6ZS10 378 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms