RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 TXKP42681 527 aa7.09□□□□□ -1.27
ECHDC1-215ENST00000475319 MAP9Q49MG5 647 aa7.09□□□□□ -1.27
ECHDC1-215ENST00000475319 HSP90B2PQ58FF3 399 aa7.09□□□□□ -1.27
ECHDC1-215ENST00000475319 ZNF280DQ6N043 979 aa7.09□□□□□ -1.27
ECHDC1-215ENST00000475319 CCDC116Q8IYX3 515 aa7.09□□□□□ -1.27
ECHDC1-215ENST00000475319 PMFBP1Q8TBY8 1022 aa7.09□□□□□ -1.27
ECHDC1-215ENST00000475319 PNISRQ8TF01 805 aaKnown RBP7.09□□□□□ -1.27
ECHDC1-215ENST00000475319 ANKRD7Q92527 254 aa7.09□□□□□ -1.27
ECHDC1-215ENST00000475319 IFT43Q96FT9 208 aa7.09□□□□□ -1.27
ECHDC1-215ENST00000475319 SYNPO2Q9UMS6 1093 aa7.09□□□□□ -1.27
ECHDC1-215ENST00000475319 ZNF232Q9UNY5 417 aa7.09□□□□□ -1.27
ECHDC1-215ENST00000475319 NUDCQ9Y266 331 aa7.09□□□□□ -1.27
ECHDC1-215ENST00000475319 TEX14Q8IWB6 1497 aa7.09□□□□□ -1.27
ECHDC1-215ENST00000475319 DIP2BQ9P265 1576 aa7.09□□□□□ -1.28
ECHDC1-215ENST00000475319 C1QTNF9BB2RNN3 333 aa7.08□□□□□ -1.28
ECHDC1-215ENST00000475319 HMGB1P1B2RPK0 211 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-215ENST00000475319 MAGEA8P43361 318 aa7.08□□□□□ -1.28
ECHDC1-215ENST00000475319 NASPP49321 788 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-215ENST00000475319 HIRAP54198 1017 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-215ENST00000475319 ARID5AQ03989 594 aa7.08□□□□□ -1.28
ECHDC1-215ENST00000475319 RABEP1Q15276 862 aa7.08□□□□□ -1.28
ECHDC1-215ENST00000475319 RTN1Q16799 776 aa7.08□□□□□ -1.28
ECHDC1-215ENST00000475319 FOXR1Q6PIV2 292 aa7.08□□□□□ -1.28
ECHDC1-215ENST00000475319 USP48Q86UV5 1035 aa7.08□□□□□ -1.28
ECHDC1-215ENST00000475319 ANKRD13AQ8IZ07 590 aa7.08□□□□□ -1.28
ECHDC1-215ENST00000475319 ZNF654Q8IZM8 581 aa7.08□□□□□ -1.28
ECHDC1-215ENST00000475319 TNPO1Q92973 898 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-215ENST00000475319 CNKSR1Q969H4 720 aa7.08□□□□□ -1.28
ECHDC1-215ENST00000475319 TMA7Q9Y2S6 64 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-215ENST00000475319 PARP3Q9Y6F1 533 aa7.08□□□□□ -1.28
ECHDC1-215ENST00000475319 A6NHS1 94 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 OPLAHO14841 1288 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 NOS2P35228 1153 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 CCT2P78371 535 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 PPP2R5AQ15172 486 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 TEAD4Q15561 434 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 C8orf34Q49A92 452 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 DNAJC21Q5F1R6 531 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 NOL8Q76FK4 1167 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 KRT222Q8N1A0 295 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 ANKRD20A12PQ8NF67 263 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 ZCRB1Q8TBF4 217 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 GPR152Q8TDT2 470 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 NUDT16Q96DE0 195 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 FRMD6Q96NE9 622 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 CEP89Q96ST8 783 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 PIF1Q9H611 641 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 CCDC39Q9UFE4 941 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 SPG7Q9UQ90 795 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 FRMD4BQ9Y2L6 1034 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 HRH3Q9Y5N1 445 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 MORC2Q9Y6X9 1032 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 ADCY10Q96PN6 1610 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 UACAQ9BZF9 1416 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 ABCC2Q92887 1545 aa7.07□□□□□ -1.28
ECHDC1-215ENST00000475319 TLDC2A0PJX2 215 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 EIF4BP23588 611 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 MAP2K2P36507 400 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 RBL2Q08999 1139 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 TRAF1Q13077 416 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 DOC2BQ14184 412 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 KRBA2Q6ZNG9 492 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 NBPF15Q8N660 670 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 L3MBTL2Q969R5 705 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 ACDQ96AP0 544 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 ESYT1Q9BSJ8 1104 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 TMX4Q9H1E5 349 aaPredicted RBP7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 GGNBP2Q9H3C7 697 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 ANTXR1Q9H6X2 564 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 SRA1Q9HD15 236 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 DIAPH3Q9NSV4 1193 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 ETAA1Q9NY74 926 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 CABP1Q9NZU7 370 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 IL16Q14005 1332 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 SYNRGQ9UMZ2 1314 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 TSPOAP1O95153 1857 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 IQGAP2Q13576 1575 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 PPFIA2O75334 1257 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 COL8A1P27658 744 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 KIAA2012Q0VF49 1180 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 MCTP2Q6DN12 878 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 HS2ST1Q7LGA3 356 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 TREML1Q86YW5 311 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 ACRBPQ8NEB7 543 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 PHACTR1Q9C0D0 580 aa7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 CHCHD3Q9NX63 227 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-215ENST00000475319 CEP162Q5TB80 1403 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 ASXL2Q76L83 1435 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 KIAA1107Q9UPP5 1409 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 UHRF1BP1LA0JNW5 1464 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 PIK3R2O00459 728 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 SPINT1O43278 529 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 TNNT1P13805 278 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 PCSK2P16519 638 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 CYP2C19P33261 490 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 PEX19P40855 299 aa7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 PTPN12Q05209 780 aaKnown RBP7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 TTC31Q49AM3 519 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.05□□□□□ -1.28
ECHDC1-215ENST00000475319 CCDC181Q5TID7 509 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms