RNA–Protein interactions for RNA: ENST00000475211.1

ERGIC3-213, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 514 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-213ENST00000475211 RGS3P49796 1198 aa16.63■□□□□ 0.25
ERGIC3-213ENST00000475211 SPDYE2Q495Y8 402 aa16.63■□□□□ 0.25
ERGIC3-213ENST00000475211 GGA3Q9NZ52 723 aa16.63■□□□□ 0.25
ERGIC3-213ENST00000475211 TMOD2Q9NZR1 351 aa16.63■□□□□ 0.25
ERGIC3-213ENST00000475211 PCDHAC2Q9Y5I4 1007 aa16.63■□□□□ 0.25
ERGIC3-213ENST00000475211 ECM29Q5VYK3 1845 aa16.62■□□□□ 0.25
ERGIC3-213ENST00000475211 RNF113AO15541 343 aaKnown RBP16.62■□□□□ 0.25
ERGIC3-213ENST00000475211 PPP4CP60510 307 aa16.62■□□□□ 0.25
ERGIC3-213ENST00000475211 BMP2KLQ5H9B9 411 aa16.62■□□□□ 0.25
ERGIC3-213ENST00000475211 ANGEL2Q5VTE6 544 aaKnown RBP16.62■□□□□ 0.25
ERGIC3-213ENST00000475211 ADGRA1Q86SQ6 560 aa16.62■□□□□ 0.25
ERGIC3-213ENST00000475211 SKAP1Q86WV1 359 aa16.62■□□□□ 0.25
ERGIC3-213ENST00000475211 APOBEC3FQ8IUX4 373 aaKnown RBP16.62■□□□□ 0.25
ERGIC3-213ENST00000475211 RILPL2Q969X0 211 aa16.62■□□□□ 0.25
ERGIC3-213ENST00000475211 DCPSQ96C86 337 aaKnown RBP16.62■□□□□ 0.25
ERGIC3-213ENST00000475211 CLEC11AQ9Y240 323 aa16.62■□□□□ 0.25
ERGIC3-213ENST00000475211 MYH7P12883 1935 aa16.62■□□□□ 0.25
ERGIC3-213ENST00000475211 TOMM70O94826 608 aa16.61■□□□□ 0.25
ERGIC3-213ENST00000475211 POTEIP0CG38 1075 aa16.61■□□□□ 0.25
ERGIC3-213ENST00000475211 POTEJP0CG39 1038 aa16.61■□□□□ 0.25
ERGIC3-213ENST00000475211 C1QTNF8P60827 252 aa16.61■□□□□ 0.25
ERGIC3-213ENST00000475211 TNFAIP1Q13829 316 aa16.61■□□□□ 0.25
ERGIC3-213ENST00000475211 FKBP1CQ5VVH2 108 aa16.61■□□□□ 0.25
ERGIC3-213ENST00000475211 CHADLQ6NUI6 762 aa16.61■□□□□ 0.25
ERGIC3-213ENST00000475211 CDC42EP5Q6NZY7 148 aa16.61■□□□□ 0.25
ERGIC3-213ENST00000475211 RBM46Q8TBY0 533 aaKnown RBP16.61■□□□□ 0.25
ERGIC3-213ENST00000475211 APPBP2Q92624 585 aa16.61■□□□□ 0.25
ERGIC3-213ENST00000475211 TDRD3Q9H7E2 651 aaKnown RBP16.61■□□□□ 0.25
ERGIC3-213ENST00000475211 ZNF70Q9UC06 446 aaPredicted RBP16.61■□□□□ 0.25
ERGIC3-213ENST00000475211 CLRN2A0PK11 232 aa16.6■□□□□ 0.25
ERGIC3-213ENST00000475211 HIP1O00291 1037 aa16.6■□□□□ 0.25
ERGIC3-213ENST00000475211 SDSP20132 328 aa16.6■□□□□ 0.25
ERGIC3-213ENST00000475211 RHBDL3P58872 404 aa16.6■□□□□ 0.25
ERGIC3-213ENST00000475211 SULF1Q8IWU6 871 aa16.6■□□□□ 0.25
ERGIC3-213ENST00000475211 SMC1BQ8NDV3 1235 aa16.6■□□□□ 0.25
ERGIC3-213ENST00000475211 VEZTQ9HBM0 779 aa16.6■□□□□ 0.25
ERGIC3-213ENST00000475211 USP40Q9NVE5 1235 aa16.6■□□□□ 0.25
ERGIC3-213ENST00000475211 AATFQ9NY61 560 aaKnown RBP eCLIP16.6■□□□□ 0.25
ERGIC3-213ENST00000475211 ASTN2O75129 1339 aaPredicted RBP16.6■□□□□ 0.25
ERGIC3-213ENST00000475211 MAGEB6P1A0A0J9YX57 407 aa16.59■□□□□ 0.25
ERGIC3-213ENST00000475211 TNNI2P48788 182 aa16.59■□□□□ 0.25
ERGIC3-213ENST00000475211 CDC37L1Q7L3B6 337 aa16.59■□□□□ 0.25
ERGIC3-213ENST00000475211 MIGA1Q8NAN2 632 aa16.59■□□□□ 0.25
ERGIC3-213ENST00000475211 RIOK1Q9BRS2 568 aaKnown RBP16.59■□□□□ 0.25
ERGIC3-213ENST00000475211 IDI2Q9BXS1 227 aa16.59■□□□□ 0.25
ERGIC3-213ENST00000475211 PPP2R3BQ9Y5P8 575 aa16.59■□□□□ 0.25
ERGIC3-213ENST00000475211 NPM3O75607 178 aaKnown RBP16.58■□□□□ 0.24
ERGIC3-213ENST00000475211 ZMYM1Q5SVZ6 1142 aa16.58■□□□□ 0.24
ERGIC3-213ENST00000475211 KRT26Q7Z3Y9 468 aa16.58■□□□□ 0.24
ERGIC3-213ENST00000475211 AIDAQ96BJ3 306 aa16.58■□□□□ 0.24
ERGIC3-213ENST00000475211 DIAPH3Q9NSV4 1193 aa16.58■□□□□ 0.24
ERGIC3-213ENST00000475211 AK9Q5TCS8 1911 aa16.58■□□□□ 0.24
ERGIC3-213ENST00000475211 MBD4O95243 580 aa16.57■□□□□ 0.24
ERGIC3-213ENST00000475211 FSTL1Q12841 308 aa16.57■□□□□ 0.24
ERGIC3-213ENST00000475211 MAP1SQ66K74 1059 aaPredicted RBP16.57■□□□□ 0.24
ERGIC3-213ENST00000475211 FAM83AQ86UY5 434 aa16.57■□□□□ 0.24
ERGIC3-213ENST00000475211 TEX11Q8IYF3 940 aa16.57■□□□□ 0.24
ERGIC3-213ENST00000475211 SH3RF3Q8TEJ3 882 aaPredicted RBP16.57■□□□□ 0.24
ERGIC3-213ENST00000475211 CRNKL1Q9BZJ0 848 aaKnown RBP16.57■□□□□ 0.24
ERGIC3-213ENST00000475211 HELLSQ9NRZ9 838 aa16.57■□□□□ 0.24
ERGIC3-213ENST00000475211 RPAP1Q9BWH6 1393 aaPredicted RBP16.56■□□□□ 0.24
ERGIC3-213ENST00000475211 ENTPD3O75355 529 aa16.56■□□□□ 0.24
ERGIC3-213ENST00000475211 WDHD1O75717 1129 aaPredicted RBP16.56■□□□□ 0.24
ERGIC3-213ENST00000475211 CHGBP05060 677 aa16.56■□□□□ 0.24
ERGIC3-213ENST00000475211 CACNB3P54284 484 aa16.56■□□□□ 0.24
ERGIC3-213ENST00000475211 DYNLL1P63167 89 aaKnown RBP16.56■□□□□ 0.24
ERGIC3-213ENST00000475211 SLFNL1Q499Z3 407 aa16.56■□□□□ 0.24
ERGIC3-213ENST00000475211 OSBP2Q969R2 916 aa16.56■□□□□ 0.24
ERGIC3-213ENST00000475211 PUS7LQ9H0K6 701 aaKnown RBP16.56■□□□□ 0.24
ERGIC3-213ENST00000475211 COL2A1P02458 1487 aaPredicted RBP16.55■□□□□ 0.24
ERGIC3-213ENST00000475211 TCP10L2B9ZVM9 353 aa16.55■□□□□ 0.24
ERGIC3-213ENST00000475211 NFIAQ12857 509 aa16.55■□□□□ 0.24
ERGIC3-213ENST00000475211 LCORLQ8N3X6 602 aa16.55■□□□□ 0.24
ERGIC3-213ENST00000475211 GLIS2Q9BZE0 524 aaPredicted RBP16.55■□□□□ 0.24
ERGIC3-213ENST00000475211 DEFB129Q9H1M3 183 aa16.55■□□□□ 0.24
ERGIC3-213ENST00000475211 ARMT1Q9H993 441 aa16.55■□□□□ 0.24
ERGIC3-213ENST00000475211 CNTNAP1P78357 1384 aa16.54■□□□□ 0.24
ERGIC3-213ENST00000475211 RAD50Q92878 1312 aa16.54■□□□□ 0.24
ERGIC3-213ENST00000475211 A0A0D9SFI3 127 aa16.54■□□□□ 0.24
ERGIC3-213ENST00000475211 ADM5C9JUS6 153 aa16.54■□□□□ 0.24
ERGIC3-213ENST00000475211 GPAA1O43292 621 aa16.54■□□□□ 0.24
ERGIC3-213ENST00000475211 GNAT2P19087 354 aa16.54■□□□□ 0.24
ERGIC3-213ENST00000475211 NMIQ13287 307 aaPredicted RBP16.54■□□□□ 0.24
ERGIC3-213ENST00000475211 RASA3Q14644 834 aa16.54■□□□□ 0.24
ERGIC3-213ENST00000475211 MCMDC2Q4G0Z9 681 aa16.54■□□□□ 0.24
ERGIC3-213ENST00000475211 USP48Q86UV5 1035 aa16.54■□□□□ 0.24
ERGIC3-213ENST00000475211 FAM151AQ8WW52 585 aa16.54■□□□□ 0.24
ERGIC3-213ENST00000475211 FAM198AQ9UFP1 575 aa16.54■□□□□ 0.24
ERGIC3-213ENST00000475211 FLT1P17948 1338 aa16.53■□□□□ 0.24
ERGIC3-213ENST00000475211 M0R2C6 588 aa16.53■□□□□ 0.24
ERGIC3-213ENST00000475211 ITGBL1O95965 494 aaPredicted RBP16.53■□□□□ 0.24
ERGIC3-213ENST00000475211 USP5P45974 858 aa16.53■□□□□ 0.24
ERGIC3-213ENST00000475211 MFAP1P55081 439 aaKnown RBP16.53■□□□□ 0.24
ERGIC3-213ENST00000475211 PICALMQ13492 652 aa16.53■□□□□ 0.24
ERGIC3-213ENST00000475211 RUFY2Q8WXA3 655 aa16.53■□□□□ 0.24
ERGIC3-213ENST00000475211 FAM227BQ96M60 508 aa16.53■□□□□ 0.24
ERGIC3-213ENST00000475211 STRBPQ96SI9 672 aaKnown RBP16.53■□□□□ 0.24
ERGIC3-213ENST00000475211 DDX4Q9NQI0 724 aaKnown RBP16.53■□□□□ 0.24
ERGIC3-213ENST00000475211 ATRNL1Q5VV63 1379 aa16.52■□□□□ 0.24
ERGIC3-213ENST00000475211 CHMLP26374 656 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms