RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 RASGRF1Q13972 1273 aa16.09■□□□□ 0.17
BRAT1-205ENST00000473879 PRAMEF18Q5VWM3 479 aa16.09■□□□□ 0.17
BRAT1-205ENST00000473879 DEFB129Q9H1M3 183 aa16.09■□□□□ 0.17
BRAT1-205ENST00000473879 CLRN2A0PK11 232 aa16.08■□□□□ 0.16
BRAT1-205ENST00000473879 SPDYE2Q495Y8 402 aa16.08■□□□□ 0.16
BRAT1-205ENST00000473879 TEKT1Q969V4 418 aa16.08■□□□□ 0.16
BRAT1-205ENST00000473879 CCDC102AQ96A19 550 aa16.08■□□□□ 0.16
BRAT1-205ENST00000473879 ZNF70Q9UC06 446 aaPredicted RBP16.08■□□□□ 0.16
BRAT1-205ENST00000473879 TRIM6-TRIM34B2RNG4 842 aa16.07■□□□□ 0.16
BRAT1-205ENST00000473879 AOC2O75106 756 aa16.07■□□□□ 0.16
BRAT1-205ENST00000473879 NOGQ13253 232 aa16.07■□□□□ 0.16
BRAT1-205ENST00000473879 TTC39AQ5SRH9 613 aa16.07■□□□□ 0.16
BRAT1-205ENST00000473879 HHIPL2Q6UWX4 724 aa16.07■□□□□ 0.16
BRAT1-205ENST00000473879 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.07■□□□□ 0.16
BRAT1-205ENST00000473879 ZDHHC15Q96MV8 337 aa16.07■□□□□ 0.16
BRAT1-205ENST00000473879 TDRD3Q9H7E2 651 aaKnown RBP16.07■□□□□ 0.16
BRAT1-205ENST00000473879 VEZTQ9HBM0 779 aa16.07■□□□□ 0.16
BRAT1-205ENST00000473879 FAM155AB1AL88 458 aaPredicted RBP16.06■□□□□ 0.16
BRAT1-205ENST00000473879 CDC45O75419 566 aa16.06■□□□□ 0.16
BRAT1-205ENST00000473879 SDSP20132 328 aa16.06■□□□□ 0.16
BRAT1-205ENST00000473879 MCAMP43121 646 aa16.06■□□□□ 0.16
BRAT1-205ENST00000473879 ZNF157P51786 506 aaPredicted RBP16.06■□□□□ 0.16
BRAT1-205ENST00000473879 TNFAIP1Q13829 316 aa16.06■□□□□ 0.16
BRAT1-205ENST00000473879 CASC1Q6TDU7 716 aa16.06■□□□□ 0.16
BRAT1-205ENST00000473879 AIDAQ96BJ3 306 aa16.06■□□□□ 0.16
BRAT1-205ENST00000473879 HMG20BQ9P0W2 317 aa16.06■□□□□ 0.16
BRAT1-205ENST00000473879 FOXN1O15353 648 aa16.05■□□□□ 0.16
BRAT1-205ENST00000473879 EIF5BO60841 1220 aaKnown RBP16.05■□□□□ 0.16
BRAT1-205ENST00000473879 UQCRFS1P1P0C7P4 283 aa16.05■□□□□ 0.16
BRAT1-205ENST00000473879 RASA3Q14644 834 aa16.05■□□□□ 0.16
BRAT1-205ENST00000473879 C8orf34Q49A92 452 aa16.05■□□□□ 0.16
BRAT1-205ENST00000473879 COL13A1Q5TAT6 717 aaPredicted RBP16.05■□□□□ 0.16
BRAT1-205ENST00000473879 MOB2Q70IA6 237 aa16.05■□□□□ 0.16
BRAT1-205ENST00000473879 ZGPATQ8N5A5 531 aaKnown RBP16.05■□□□□ 0.16
BRAT1-205ENST00000473879 RILPL2Q969X0 211 aa16.05■□□□□ 0.16
BRAT1-205ENST00000473879 MYO5AQ9Y4I1 1855 aaKnown RBP16.04■□□□□ 0.16
BRAT1-205ENST00000473879 UBE2Q2LH0YL09 131 aa16.04■□□□□ 0.16
BRAT1-205ENST00000473879 LDHBP07195 334 aaKnown RBP16.04■□□□□ 0.16
BRAT1-205ENST00000473879 SLC10A3P09131 477 aa16.04■□□□□ 0.16
BRAT1-205ENST00000473879 PRDX5P30044 214 aa16.04■□□□□ 0.16
BRAT1-205ENST00000473879 TTLL12Q14166 644 aaPredicted RBP16.04■□□□□ 0.16
BRAT1-205ENST00000473879 SUPT20HL1Q3ZLR7 823 aa16.04■□□□□ 0.16
BRAT1-205ENST00000473879 APOBEC3HQ6NTF7 200 aaKnown RBP16.04■□□□□ 0.16
BRAT1-205ENST00000473879 ARMC9Q7Z3E5 817 aa16.04■□□□□ 0.16
BRAT1-205ENST00000473879 ZNF384Q8TF68 577 aa16.04■□□□□ 0.16
BRAT1-205ENST00000473879 EVI5LQ96CN4 794 aa16.04■□□□□ 0.16
BRAT1-205ENST00000473879 HAUS7Q99871 368 aa16.04■□□□□ 0.16
BRAT1-205ENST00000473879 BOLA2Q9H3K6 86 aa16.04■□□□□ 0.16
BRAT1-205ENST00000473879 IGSF3O75054 1194 aa16.03■□□□□ 0.16
BRAT1-205ENST00000473879 TNNI2P48788 182 aa16.03■□□□□ 0.16
BRAT1-205ENST00000473879 CTCFP49711 727 aaPredicted RBP16.03■□□□□ 0.16
BRAT1-205ENST00000473879 MAP3K11Q16584 847 aa16.03■□□□□ 0.16
BRAT1-205ENST00000473879 PI16Q6UXB8 463 aa16.03■□□□□ 0.16
BRAT1-205ENST00000473879 SPATA5Q8NB90 893 aa16.03■□□□□ 0.16
BRAT1-205ENST00000473879 BEGAINQ9BUH8 593 aa16.03■□□□□ 0.16
BRAT1-205ENST00000473879 BACH2Q9BYV9 841 aa16.03■□□□□ 0.16
BRAT1-205ENST00000473879 RFX7Q2KHR2 1363 aa16.02■□□□□ 0.16
BRAT1-205ENST00000473879 GAKO14976 1311 aa16.02■□□□□ 0.16
BRAT1-205ENST00000473879 PPP1R12BO60237 982 aaPredicted RBP16.02■□□□□ 0.16
BRAT1-205ENST00000473879 LDLRAD1Q5T700 205 aa16.02■□□□□ 0.16
BRAT1-205ENST00000473879 NBPF12Q5TAG4 269 aaPredicted RBP16.02■□□□□ 0.16
BRAT1-205ENST00000473879 FKBP1CQ5VVH2 108 aa16.02■□□□□ 0.16
BRAT1-205ENST00000473879 SPTY2D1Q68D10 685 aaPredicted RBP16.02■□□□□ 0.16
BRAT1-205ENST00000473879 RASAL3Q86YV0 1011 aa16.02■□□□□ 0.16
BRAT1-205ENST00000473879 ZIC5Q96T25 663 aa16.02■□□□□ 0.16
BRAT1-205ENST00000473879 DNAJC2Q99543 621 aaKnown RBP16.02■□□□□ 0.16
BRAT1-205ENST00000473879 SSC5DA1L4H1 1573 aa16.01■□□□□ 0.15
BRAT1-205ENST00000473879 UNCXA6NJT0 531 aa16.01■□□□□ 0.15
BRAT1-205ENST00000473879 TCP10L2B9ZVM9 353 aa16.01■□□□□ 0.15
BRAT1-205ENST00000473879 MAP4K4O95819 1239 aaPredicted RBP16.01■□□□□ 0.15
BRAT1-205ENST00000473879 KIF23Q02241 960 aaPredicted RBP16.01■□□□□ 0.15
BRAT1-205ENST00000473879 PRKG1Q13976 671 aa16.01■□□□□ 0.15
BRAT1-205ENST00000473879 FAM83AQ86UY5 434 aa16.01■□□□□ 0.15
BRAT1-205ENST00000473879 REM2Q8IYK8 340 aaPredicted RBP16.01■□□□□ 0.15
BRAT1-205ENST00000473879 FAM163AQ96GL9 167 aaPredicted RBP16.01■□□□□ 0.15
BRAT1-205ENST00000473879 TEPSINQ96N21 525 aa16.01■□□□□ 0.15
BRAT1-205ENST00000473879 TMOD2Q9NZR1 351 aa16.01■□□□□ 0.15
BRAT1-205ENST00000473879 ANGEL1Q9UNK9 670 aaKnown RBP16.01■□□□□ 0.15
BRAT1-205ENST00000473879 DAGLAQ9Y4D2 1042 aa16.01■□□□□ 0.15
BRAT1-205ENST00000473879 MYH2Q9UKX2 1941 aa16.01■□□□□ 0.15
BRAT1-205ENST00000473879 HIP1O00291 1037 aa16■□□□□ 0.15
BRAT1-205ENST00000473879 CA12O43570 354 aa16■□□□□ 0.15
BRAT1-205ENST00000473879 CYP2E1P05181 493 aaPredicted RBP16■□□□□ 0.15
BRAT1-205ENST00000473879 DIXDC1Q155Q3 683 aa16■□□□□ 0.15
BRAT1-205ENST00000473879 TBC1D9Q6ZT07 1266 aa16■□□□□ 0.15
BRAT1-205ENST00000473879 TICAM2Q86XR7 235 aa16■□□□□ 0.15
BRAT1-205ENST00000473879 FSD1Q9BTV5 496 aa16■□□□□ 0.15
BRAT1-205ENST00000473879 PRDM10Q9NQV6 1147 aa16■□□□□ 0.15
BRAT1-205ENST00000473879 PAG1Q9NWQ8 432 aa16■□□□□ 0.15
BRAT1-205ENST00000473879 ABCF2Q9UG63 623 aa16■□□□□ 0.15
BRAT1-205ENST00000473879 OTOFQ9HC10 1997 aa15.99■□□□□ 0.15
BRAT1-205ENST00000473879 HSPA8P11142 646 aaKnown RBP15.99■□□□□ 0.15
BRAT1-205ENST00000473879 CACNB3P54284 484 aa15.99■□□□□ 0.15
BRAT1-205ENST00000473879 TTF1Q15361 905 aaPredicted RBP15.99■□□□□ 0.15
BRAT1-205ENST00000473879 LRRFIP1Q32MZ4 808 aaKnown RBP15.99■□□□□ 0.15
BRAT1-205ENST00000473879 ERICH6Q7L0X2 663 aa15.99■□□□□ 0.15
BRAT1-205ENST00000473879 DZIP1Q86YF9 867 aaKnown RBP15.99■□□□□ 0.15
BRAT1-205ENST00000473879 SLF2Q8IX21 1173 aa15.99■□□□□ 0.15
BRAT1-205ENST00000473879 TMEM39BQ9GZU3 492 aa15.99■□□□□ 0.15
BRAT1-205ENST00000473879 LAMB1P07942 1786 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms