RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 DIXDC1Q155Q3 683 aa14.16□□□□□ -0.14
CPNE1-222ENST00000473373 HHIPL2Q6UWX4 724 aa14.16□□□□□ -0.14
CPNE1-222ENST00000473373 ERICH6Q7L0X2 663 aa14.16□□□□□ -0.14
CPNE1-222ENST00000473373 SSH3Q8TE77 659 aa14.16□□□□□ -0.14
CPNE1-222ENST00000473373 ZDHHC15Q96MV8 337 aa14.16□□□□□ -0.14
CPNE1-222ENST00000473373 AOX1Q06278 1338 aa14.15□□□□□ -0.14
CPNE1-222ENST00000473373 HSP90AB4PQ58FF6 505 aa14.15□□□□□ -0.14
CPNE1-222ENST00000473373 TNNI3KQ59H18 835 aa14.15□□□□□ -0.14
CPNE1-222ENST00000473373 CEP85Q6P2H3 762 aa14.15□□□□□ -0.14
CPNE1-222ENST00000473373 ERC1Q8IUD2 1116 aa14.15□□□□□ -0.14
CPNE1-222ENST00000473373 HOOK2Q96ED9 719 aa14.15□□□□□ -0.14
CPNE1-222ENST00000473373 NOL10Q9BSC4 688 aaKnown RBP14.15□□□□□ -0.14
CPNE1-222ENST00000473373 TMEM39BQ9GZU3 492 aa14.15□□□□□ -0.14
CPNE1-222ENST00000473373 RAI14Q9P0K7 980 aa14.15□□□□□ -0.14
CPNE1-222ENST00000473373 FPGT-TNNI3KV9GXZ4 949 aa14.15□□□□□ -0.14
CPNE1-222ENST00000473373 SALL1Q9NSC2 1324 aa14.15□□□□□ -0.15
CPNE1-222ENST00000473373 MAST2Q6P0Q8 1798 aa14.14□□□□□ -0.15
CPNE1-222ENST00000473373 SREBF2Q12772 1141 aa14.14□□□□□ -0.15
CPNE1-222ENST00000473373 TCP10Q12799 353 aa14.14□□□□□ -0.15
CPNE1-222ENST00000473373 POTEDQ86YR6 584 aa14.14□□□□□ -0.15
CPNE1-222ENST00000473373 ZSCAN29Q8IWY8 852 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-222ENST00000473373 REM2Q8IYK8 340 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-222ENST00000473373 SPATA5Q8NB90 893 aa14.14□□□□□ -0.15
CPNE1-222ENST00000473373 MRIQ9BWK5 157 aa14.14□□□□□ -0.15
CPNE1-222ENST00000473373 LRP2BPQ9P2M1 347 aa14.14□□□□□ -0.15
CPNE1-222ENST00000473373 EXOC6BQ9Y2D4 811 aa14.14□□□□□ -0.15
CPNE1-222ENST00000473373 DAGLAQ9Y4D2 1042 aa14.14□□□□□ -0.15
CPNE1-222ENST00000473373 CSADQ9Y600 493 aa14.14□□□□□ -0.15
CPNE1-222ENST00000473373 GSTO1P78417 241 aa14.13□□□□□ -0.15
CPNE1-222ENST00000473373 CTU1Q7Z7A3 348 aaKnown RBP14.13□□□□□ -0.15
CPNE1-222ENST00000473373 ANKRD13AQ8IZ07 590 aa14.13□□□□□ -0.15
CPNE1-222ENST00000473373 USP40Q9NVE5 1235 aa14.13□□□□□ -0.15
CPNE1-222ENST00000473373 PCDH10Q9P2E7 1040 aa14.13□□□□□ -0.15
CPNE1-222ENST00000473373 LDHCP07864 332 aa14.12□□□□□ -0.15
CPNE1-222ENST00000473373 DCAF15Q66K64 600 aa14.12□□□□□ -0.15
CPNE1-222ENST00000473373 APOBEC3HQ6NTF7 200 aaKnown RBP14.12□□□□□ -0.15
CPNE1-222ENST00000473373 DBNDD2Q9BQY9 259 aa14.12□□□□□ -0.15
CPNE1-222ENST00000473373 CCDC8Q9H0W5 538 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-222ENST00000473373 GPR108Q9NPR9 543 aa14.12□□□□□ -0.15
CPNE1-222ENST00000473373 SNRKQ9NRH2 765 aa14.12□□□□□ -0.15
CPNE1-222ENST00000473373 HMG20BQ9P0W2 317 aa14.12□□□□□ -0.15
CPNE1-222ENST00000473373 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-222ENST00000473373 SSC5DA1L4H1 1573 aa14.12□□□□□ -0.15
CPNE1-222ENST00000473373 PDS5AQ29RF7 1337 aaKnown RBP14.12□□□□□ -0.15
CPNE1-222ENST00000473373 TBC1D8O95759 1140 aa14.11□□□□□ -0.15
CPNE1-222ENST00000473373 ARID4AP29374 1257 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-222ENST00000473373 CDC42EP5Q6NZY7 148 aa14.11□□□□□ -0.15
CPNE1-222ENST00000473373 PI16Q6UXB8 463 aa14.11□□□□□ -0.15
CPNE1-222ENST00000473373 FAM83AQ86UY5 434 aa14.11□□□□□ -0.15
CPNE1-222ENST00000473373 AACSQ86V21 672 aa14.11□□□□□ -0.15
CPNE1-222ENST00000473373 RPAP2Q8IXW5 612 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-222ENST00000473373 CLMNQ96JQ2 1002 aa14.11□□□□□ -0.15
CPNE1-222ENST00000473373 ELP3Q9H9T3 547 aa14.11□□□□□ -0.15
CPNE1-222ENST00000473373 USP2O75604 605 aaPredicted RBP14.1□□□□□ -0.15
CPNE1-222ENST00000473373 MCAMP43121 646 aa14.1□□□□□ -0.15
CPNE1-222ENST00000473373 BTDP43251 543 aa14.1□□□□□ -0.15
CPNE1-222ENST00000473373 PICALMQ13492 652 aa14.1□□□□□ -0.15
CPNE1-222ENST00000473373 PDE3AQ14432 1141 aa14.1□□□□□ -0.15
CPNE1-222ENST00000473373 FKBP1CQ5VVH2 108 aa14.1□□□□□ -0.15
CPNE1-222ENST00000473373 TBC1D9Q6ZT07 1266 aa14.1□□□□□ -0.15
CPNE1-222ENST00000473373 CLASRPQ8N2M8 674 aaKnown RBP14.1□□□□□ -0.15
CPNE1-222ENST00000473373 WNK4Q96J92 1243 aa14.1□□□□□ -0.15
CPNE1-222ENST00000473373 WRNIP1Q96S55 665 aa14.1□□□□□ -0.15
CPNE1-222ENST00000473373 IL1RAPL2Q9NP60 686 aa14.1□□□□□ -0.15
CPNE1-222ENST00000473373 HPS5Q9UPZ3 1129 aa14.1□□□□□ -0.15
CPNE1-222ENST00000473373 NOP58Q9Y2X3 529 aaKnown RBP14.1□□□□□ -0.15
CPNE1-222ENST00000473373 MROH7-TTC4A0A0A0MT08 1334 aa14.1□□□□□ -0.15
CPNE1-222ENST00000473373 MANSC4A6NHS7 340 aaPredicted RBP14.09□□□□□ -0.15
CPNE1-222ENST00000473373 IFIT2P09913 472 aaKnown RBP14.09□□□□□ -0.15
CPNE1-222ENST00000473373 MAP3K9P80192 1104 aa14.09□□□□□ -0.15
CPNE1-222ENST00000473373 MECOMQ03112 1051 aa14.09□□□□□ -0.15
CPNE1-222ENST00000473373 MAP3K11Q16584 847 aa14.09□□□□□ -0.15
CPNE1-222ENST00000473373 LDLRAD1Q5T700 205 aa14.09□□□□□ -0.15
CPNE1-222ENST00000473373 SPRYD7Q5W111 196 aa14.09□□□□□ -0.15
CPNE1-222ENST00000473373 OTUD7BQ6GQQ9 843 aa14.09□□□□□ -0.15
CPNE1-222ENST00000473373 MIGA2Q7L4E1 593 aa14.09□□□□□ -0.15
CPNE1-222ENST00000473373 FAM151AQ8WW52 585 aa14.09□□□□□ -0.15
CPNE1-222ENST00000473373 KIF1BPQ96EK5 621 aa14.09□□□□□ -0.15
CPNE1-222ENST00000473373 ZNF341Q9BYN7 854 aa14.09□□□□□ -0.15
CPNE1-222ENST00000473373 CDK5RAP2Q96SN8 1893 aa14.09□□□□□ -0.15
CPNE1-222ENST00000473373 MYH7P12883 1935 aa14.08□□□□□ -0.16
CPNE1-222ENST00000473373 ZBTB48P10074 688 aaPredicted RBP14.08□□□□□ -0.16
CPNE1-222ENST00000473373 C20orf194Q5TEA3 1177 aa14.08□□□□□ -0.16
CPNE1-222ENST00000473373 NAA16Q6N069 864 aaPredicted RBP14.08□□□□□ -0.16
CPNE1-222ENST00000473373 CDAN1Q8IWY9 1227 aa14.08□□□□□ -0.16
CPNE1-222ENST00000473373 ZNF296Q8WUU4 475 aaPredicted RBP14.08□□□□□ -0.16
CPNE1-222ENST00000473373 OPTNQ96CV9 577 aa14.08□□□□□ -0.16
CPNE1-222ENST00000473373 TEPSINQ96N21 525 aa14.08□□□□□ -0.16
CPNE1-222ENST00000473373 ZBTB40Q9NUA8 1239 aa14.08□□□□□ -0.16
CPNE1-222ENST00000473373 LAMB1P07942 1786 aa14.08□□□□□ -0.16
CPNE1-222ENST00000473373 RPAP1Q9BWH6 1393 aaPredicted RBP14.08□□□□□ -0.16
CPNE1-222ENST00000473373 MYH1P12882 1939 aa14.07□□□□□ -0.16
CPNE1-222ENST00000473373 ATAD5Q96QE3 1844 aa14.07□□□□□ -0.16
CPNE1-222ENST00000473373 UNCXA6NJT0 531 aa14.07□□□□□ -0.16
CPNE1-222ENST00000473373 IDH1O75874 414 aaKnown RBP14.07□□□□□ -0.16
CPNE1-222ENST00000473373 BAG3O95817 575 aa14.07□□□□□ -0.16
CPNE1-222ENST00000473373 RGS3P49796 1198 aa14.07□□□□□ -0.16
CPNE1-222ENST00000473373 RHPN1Q8TCX5 695 aa14.07□□□□□ -0.16
CPNE1-222ENST00000473373 EAF2Q96CJ1 260 aaPredicted RBP14.07□□□□□ -0.16
CPNE1-222ENST00000473373 OTUD5Q96G74 571 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms