RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	FAM198A	Q9UFP1	575 aa		12.16	□□□□□ -0.46
MCF2L-223	ENST00000473345	ZNF112	Q9UJU3	913 aa		12.16	□□□□□ -0.46
MCF2L-223	ENST00000473345	CACNA1F	O60840	1977 aa		12.16	□□□□□ -0.46
MCF2L-223	ENST00000473345	MROH5	Q6ZUA9	1318 aa		12.15	□□□□□ -0.46
MCF2L-223	ENST00000473345	TNNI2	P48788	182 aa		12.15	□□□□□ -0.46
MCF2L-223	ENST00000473345	TCP10	Q12799	353 aa		12.15	□□□□□ -0.46
MCF2L-223	ENST00000473345	SNAPC2	Q13487	334 aa		12.15	□□□□□ -0.46
MCF2L-223	ENST00000473345	METTL24	Q5JXM2	366 aa		12.15	□□□□□ -0.46
MCF2L-223	ENST00000473345	CHRDL2	Q6WN34	429 aa		12.15	□□□□□ -0.46
MCF2L-223	ENST00000473345	MRPL50	Q8N5N7	158 aa	Known RBP	12.15	□□□□□ -0.46
MCF2L-223	ENST00000473345	USP44	Q9H0E7	712 aa		12.15	□□□□□ -0.46
MCF2L-223	ENST00000473345	SRRD	Q9UH36	339 aa		12.15	□□□□□ -0.46
MCF2L-223	ENST00000473345	GABRQ	Q9UN88	632 aa		12.15	□□□□□ -0.46
MCF2L-223	ENST00000473345	KCNH4	Q9UQ05	1017 aa		12.15	□□□□□ -0.46
MCF2L-223	ENST00000473345	DAGLA	Q9Y4D2	1042 aa		12.15	□□□□□ -0.46
MCF2L-223	ENST00000473345	RPAP1	Q9BWH6	1393 aa	Predicted RBP	12.15	□□□□□ -0.46
MCF2L-223	ENST00000473345	ZNF521	Q96K83	1311 aa		12.14	□□□□□ -0.47
MCF2L-223	ENST00000473345	PDHX	O00330	501 aa		12.14	□□□□□ -0.47
MCF2L-223	ENST00000473345	CYP2C8	P10632	490 aa		12.14	□□□□□ -0.47
MCF2L-223	ENST00000473345	PRDX5	P30044	214 aa		12.14	□□□□□ -0.47
MCF2L-223	ENST00000473345	PSMC4	P43686	418 aa		12.14	□□□□□ -0.47
MCF2L-223	ENST00000473345	FKBP1C	Q5VVH2	108 aa		12.14	□□□□□ -0.47
MCF2L-223	ENST00000473345	CDC42EP5	Q6NZY7	148 aa		12.14	□□□□□ -0.47
MCF2L-223	ENST00000473345	SH3BP5L	Q7L8J4	393 aa		12.14	□□□□□ -0.47
MCF2L-223	ENST00000473345	ATG9A	Q7Z3C6	839 aa		12.14	□□□□□ -0.47
MCF2L-223	ENST00000473345	MRI	Q9BWK5	157 aa		12.14	□□□□□ -0.47
MCF2L-223	ENST00000473345	BCR	P11274	1271 aa		12.13	□□□□□ -0.47
MCF2L-223	ENST00000473345	PRKCZ	Q05513	592 aa		12.13	□□□□□ -0.47
MCF2L-223	ENST00000473345	PPAT	Q06203	517 aa		12.13	□□□□□ -0.47
MCF2L-223	ENST00000473345	ANKRD23	Q86SG2	305 aa		12.13	□□□□□ -0.47
MCF2L-223	ENST00000473345	NBPF11	Q86T75	865 aa		12.13	□□□□□ -0.47
MCF2L-223	ENST00000473345	CCDC84	Q86UT8	332 aa	Predicted RBP	12.13	□□□□□ -0.47
MCF2L-223	ENST00000473345	ZCCHC17	Q9NP64	241 aa	Known RBP	12.13	□□□□□ -0.47
MCF2L-223	ENST00000473345	PHF20L1	A8MW92	1017 aa		12.12	□□□□□ -0.47
MCF2L-223	ENST00000473345	SOX1	O00570	391 aa	Predicted RBP	12.12	□□□□□ -0.47
MCF2L-223	ENST00000473345	CCL5	P13501	91 aa		12.12	□□□□□ -0.47
MCF2L-223	ENST00000473345	HHIPL2	Q6UWX4	724 aa		12.12	□□□□□ -0.47
MCF2L-223	ENST00000473345	VPS37D	Q86XT2	251 aa		12.12	□□□□□ -0.47
MCF2L-223	ENST00000473345	TBC1D22A	Q8WUA7	517 aa		12.12	□□□□□ -0.47
MCF2L-223	ENST00000473345	FAM151A	Q8WW52	585 aa		12.12	□□□□□ -0.47
MCF2L-223	ENST00000473345	ZNF341	Q9BYN7	854 aa		12.12	□□□□□ -0.47
MCF2L-223	ENST00000473345	UNC93B1	Q9H1C4	597 aa		12.12	□□□□□ -0.47
MCF2L-223	ENST00000473345	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	12.12	□□□□□ -0.47
MCF2L-223	ENST00000473345	RFX7	Q2KHR2	1363 aa		12.12	□□□□□ -0.47
MCF2L-223	ENST00000473345	TRIOBP	Q9H2D6	2365 aa		12.12	□□□□□ -0.47
MCF2L-223	ENST00000473345	RANBP2	P49792	3224 aa	Known RBP	12.11	□□□□□ -0.47
MCF2L-223	ENST00000473345	GRK4	P32298	578 aa		12.11	□□□□□ -0.47
MCF2L-223	ENST00000473345	GJA8	P48165	433 aa		12.11	□□□□□ -0.47
MCF2L-223	ENST00000473345	NOL9	Q5SY16	702 aa	Known RBP	12.11	□□□□□ -0.47
MCF2L-223	ENST00000473345	MYPN	Q86TC9	1320 aa		12.11	□□□□□ -0.47
MCF2L-223	ENST00000473345	FRAT2	O75474	233 aa	Predicted RBP	12.1	□□□□□ -0.47
MCF2L-223	ENST00000473345	ADORA1	P30542	326 aa		12.1	□□□□□ -0.47
MCF2L-223	ENST00000473345	PHKA1	P46020	1223 aa		12.1	□□□□□ -0.47
MCF2L-223	ENST00000473345	PUM3	Q15397	648 aa	Known RBP	12.1	□□□□□ -0.47
MCF2L-223	ENST00000473345	CAVIN4	Q5BKX8	364 aa		12.1	□□□□□ -0.47
MCF2L-223	ENST00000473345	ZNF384	Q8TF68	577 aa		12.1	□□□□□ -0.47
MCF2L-223	ENST00000473345	SSH1	Q8WYL5	1049 aa		12.1	□□□□□ -0.47
MCF2L-223	ENST00000473345	DDX4	Q9NQI0	724 aa	Known RBP	12.1	□□□□□ -0.47
MCF2L-223	ENST00000473345	KIF16B	Q96L93	1317 aa		12.1	□□□□□ -0.47
MCF2L-223	ENST00000473345	DDTL	A6NHG4	134 aa	Predicted RBP	12.09	□□□□□ -0.47
MCF2L-223	ENST00000473345	EYA2	O00167	538 aa		12.09	□□□□□ -0.47
MCF2L-223	ENST00000473345	FMNL1	O95466	1100 aa	Predicted RBP	12.09	□□□□□ -0.47
MCF2L-223	ENST00000473345	GJB1	P08034	283 aa		12.09	□□□□□ -0.47
MCF2L-223	ENST00000473345	ELN	P15502	786 aa		12.09	□□□□□ -0.47
MCF2L-223	ENST00000473345	KIF22	Q14807	665 aa		12.09	□□□□□ -0.47
MCF2L-223	ENST00000473345	DCAF15	Q66K64	600 aa		12.09	□□□□□ -0.47
MCF2L-223	ENST00000473345	DPF3	Q92784	378 aa		12.09	□□□□□ -0.47
MCF2L-223	ENST00000473345	SUGT1	Q9Y2Z0	365 aa		12.09	□□□□□ -0.47
MCF2L-223	ENST00000473345		A0A0G2JLL6	359 aa	Predicted RBP	12.08	□□□□□ -0.48
MCF2L-223	ENST00000473345	ZBTB7B	O15156	539 aa	Predicted RBP	12.08	□□□□□ -0.48
MCF2L-223	ENST00000473345	GNRH1	P01148	92 aa		12.08	□□□□□ -0.48
MCF2L-223	ENST00000473345	PRMT2	P55345	433 aa		12.08	□□□□□ -0.48
MCF2L-223	ENST00000473345	RRP1B	Q14684	758 aa	Known RBP	12.08	□□□□□ -0.48
MCF2L-223	ENST00000473345	ARHGEF6	Q15052	776 aa		12.08	□□□□□ -0.48
MCF2L-223	ENST00000473345	PRRT2	Q7Z6L0	340 aa	Predicted RBP	12.08	□□□□□ -0.48
MCF2L-223	ENST00000473345	U2AF1L4	Q8WU68	220 aa	Known RBP	12.08	□□□□□ -0.48
MCF2L-223	ENST00000473345	RNF208	Q9H0X6	261 aa		12.08	□□□□□ -0.48
MCF2L-223	ENST00000473345	USP40	Q9NVE5	1235 aa		12.08	□□□□□ -0.48
MCF2L-223	ENST00000473345	TMOD2	Q9NZR1	351 aa		12.08	□□□□□ -0.48
MCF2L-223	ENST00000473345	PA2G4	Q9UQ80	394 aa	Known RBP	12.08	□□□□□ -0.48
MCF2L-223	ENST00000473345	AFG3L2	Q9Y4W6	797 aa		12.08	□□□□□ -0.48
MCF2L-223	ENST00000473345	PHIP	Q8WWQ0	1821 aa		12.07	□□□□□ -0.48
MCF2L-223	ENST00000473345	FAM196B	A6NMK8	535 aa		12.07	□□□□□ -0.48
MCF2L-223	ENST00000473345	CEP290	O15078	2479 aa		12.07	□□□□□ -0.48
MCF2L-223	ENST00000473345	WDHD1	O75717	1129 aa	Predicted RBP	12.07	□□□□□ -0.48
MCF2L-223	ENST00000473345	IFIT1	P09914	478 aa	Known RBP	12.07	□□□□□ -0.48
MCF2L-223	ENST00000473345	PTPRA	P18433	802 aa		12.07	□□□□□ -0.48
MCF2L-223	ENST00000473345	FLT3LG	P49771	235 aa		12.07	□□□□□ -0.48
MCF2L-223	ENST00000473345	RGS3	P49796	1198 aa		12.07	□□□□□ -0.48
MCF2L-223	ENST00000473345	MAP3K10	Q02779	954 aa		12.07	□□□□□ -0.48
MCF2L-223	ENST00000473345	WDR66	Q8TBY9	1149 aa		12.07	□□□□□ -0.48
MCF2L-223	ENST00000473345	RAET1E	Q8TD07	263 aa		12.07	□□□□□ -0.48
MCF2L-223	ENST00000473345	DIS3L	Q8TF46	1054 aa	Known RBP	12.07	□□□□□ -0.48
MCF2L-223	ENST00000473345	LPIN2	Q92539	896 aa		12.07	□□□□□ -0.48
MCF2L-223	ENST00000473345	LRCH3	Q96II8	777 aa		12.07	□□□□□ -0.48
MCF2L-223	ENST00000473345	SIL1	Q9H173	461 aa		12.07	□□□□□ -0.48
MCF2L-223	ENST00000473345	ZHX2	Q9Y6X8	837 aa		12.07	□□□□□ -0.48
MCF2L-223	ENST00000473345	ALPK3	Q96L96	1907 aa		12.07	□□□□□ -0.48
MCF2L-223	ENST00000473345	GAK	O14976	1311 aa		12.07	□□□□□ -0.48
MCF2L-223	ENST00000473345	MAST3	O60307	1309 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms