RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 PCNX4Q63HM2 1172 aa9.47□□□□□ -0.89
SSB-209ENST00000470621 TP53INP1Q96A56 240 aa9.47□□□□□ -0.89
SSB-209ENST00000470621 WDR18Q9BV38 432 aa9.47□□□□□ -0.89
SSB-209ENST00000470621 CBX8Q9HC52 389 aa9.47□□□□□ -0.89
SSB-209ENST00000470621 USP31Q70CQ4 1352 aa9.47□□□□□ -0.89
SSB-209ENST00000470621 ZNF862O60290 1169 aa9.46□□□□□ -0.9
SSB-209ENST00000470621 TIAF1O95411 115 aa9.46□□□□□ -0.9
SSB-209ENST00000470621 H2AFB1P0C5Y9 115 aa9.46□□□□□ -0.9
SSB-209ENST00000470621 H2AFB2P0C5Z0 115 aa9.46□□□□□ -0.9
SSB-209ENST00000470621 DRD2P14416 443 aa9.46□□□□□ -0.9
SSB-209ENST00000470621 ARNTP27540 789 aa9.46□□□□□ -0.9
SSB-209ENST00000470621 MAP3K11Q16584 847 aa9.46□□□□□ -0.9
SSB-209ENST00000470621 LDLRAD1Q5T700 205 aa9.46□□□□□ -0.9
SSB-209ENST00000470621 MAP1SQ66K74 1059 aaPredicted RBP9.46□□□□□ -0.9
SSB-209ENST00000470621 FDX2Q6P4F2 183 aa9.46□□□□□ -0.9
SSB-209ENST00000470621 SV2BQ7L1I2 683 aa9.46□□□□□ -0.9
SSB-209ENST00000470621 ARMC10Q8N2F6 343 aa9.46□□□□□ -0.9
SSB-209ENST00000470621 KCNB2Q92953 911 aa9.46□□□□□ -0.9
SSB-209ENST00000470621 UNCXA6NJT0 531 aa9.45□□□□□ -0.9
SSB-209ENST00000470621 F6X3S4 739 aa9.45□□□□□ -0.9
SSB-209ENST00000470621 ANKRD34AQ69YU3 496 aa9.45□□□□□ -0.9
SSB-209ENST00000470621 SMG8Q8ND04 991 aaKnown RBP9.45□□□□□ -0.9
SSB-209ENST00000470621 ZNF428Q96B54 188 aa9.45□□□□□ -0.9
SSB-209ENST00000470621 FAM46AQ96IP4 442 aaKnown RBP9.45□□□□□ -0.9
SSB-209ENST00000470621 CEP41Q9BYV8 373 aa9.45□□□□□ -0.9
SSB-209ENST00000470621 EIF4EBP3O60516 100 aaPredicted RBP9.44□□□□□ -0.9
SSB-209ENST00000470621 ADH5P11766 374 aa9.44□□□□□ -0.9
SSB-209ENST00000470621 ST13P50502 369 aaKnown RBP9.44□□□□□ -0.9
SSB-209ENST00000470621 AKAP4Q5JQC9 854 aa9.44□□□□□ -0.9
SSB-209ENST00000470621 SUGCTQ9HAC7 445 aa9.44□□□□□ -0.9
SSB-209ENST00000470621 CYP4F12Q9HCS2 524 aa9.44□□□□□ -0.9
SSB-209ENST00000470621 AOC2O75106 756 aa9.43□□□□□ -0.9
SSB-209ENST00000470621 TTBK2Q6IQ55 1244 aa9.43□□□□□ -0.9
SSB-209ENST00000470621 C12orf50Q8NA57 414 aaPredicted RBP9.43□□□□□ -0.9
SSB-209ENST00000470621 GPBAR1Q8TDU6 330 aa9.43□□□□□ -0.9
SSB-209ENST00000470621 LLGL2Q6P1M3 1020 aa9.42□□□□□ -0.9
SSB-209ENST00000470621 C2CD4AQ8NCU7 369 aaPredicted RBP9.42□□□□□ -0.9
SSB-209ENST00000470621 UTP4Q969X6 686 aaKnown RBP9.42□□□□□ -0.9
SSB-209ENST00000470621 EMILIN2Q9BXX0 1053 aa9.42□□□□□ -0.9
SSB-209ENST00000470621 RAD18Q9NS91 495 aa9.42□□□□□ -0.9
SSB-209ENST00000470621 KRT82Q9NSB4 513 aa9.42□□□□□ -0.9
SSB-209ENST00000470621 CACNA2D2Q9NY47 1150 aa9.42□□□□□ -0.9
SSB-209ENST00000470621 PPP1R9AQ9ULJ8 1098 aa9.42□□□□□ -0.9
SSB-209ENST00000470621 PCDHGC5Q9Y5F6 944 aa9.42□□□□□ -0.9
SSB-209ENST00000470621 SART1O43290 800 aaKnown RBP9.41□□□□□ -0.9
SSB-209ENST00000470621 RECKO95980 971 aa9.41□□□□□ -0.9
SSB-209ENST00000470621 LIG3P49916 1009 aa9.41□□□□□ -0.9
SSB-209ENST00000470621 SOX4Q06945 474 aaPredicted RBP9.41□□□□□ -0.9
SSB-209ENST00000470621 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.41□□□□□ -0.9
SSB-209ENST00000470621 NBPF11Q86T75 865 aa9.41□□□□□ -0.9
SSB-209ENST00000470621 BACH2Q9BYV9 841 aa9.41□□□□□ -0.9
SSB-209ENST00000470621 AP4E1Q9UPM8 1137 aa9.41□□□□□ -0.9
SSB-209ENST00000470621 TLR6Q9Y2C9 796 aa9.41□□□□□ -0.9
SSB-209ENST00000470621 ACTL7BQ9Y614 415 aa9.41□□□□□ -0.9
SSB-209ENST00000470621 PTPN11Q06124 597 aaPredicted RBP9.4□□□□□ -0.9
SSB-209ENST00000470621 LRP8Q14114 963 aa9.4□□□□□ -0.9
SSB-209ENST00000470621 KIF4BQ2VIQ3 1234 aa9.4□□□□□ -0.9
SSB-209ENST00000470621 UVSSAQ2YD98 709 aa9.4□□□□□ -0.9
SSB-209ENST00000470621 SGO2Q562F6 1265 aa9.4□□□□□ -0.9
SSB-209ENST00000470621 HP1BP3Q5SSJ5 553 aaPredicted RBP9.4□□□□□ -0.9
SSB-209ENST00000470621 KRTAP1-3Q8IUG1 177 aa9.4□□□□□ -0.9
SSB-209ENST00000470621 GAL3ST3Q96A11 431 aa9.4□□□□□ -0.9
SSB-209ENST00000470621 MRRFQ96E11 262 aaKnown RBP9.4□□□□□ -0.9
SSB-209ENST00000470621 MYRFLQ96LU7 910 aa9.4□□□□□ -0.9
SSB-209ENST00000470621 NOC4LQ9BVI4 516 aaKnown RBP9.4□□□□□ -0.9
SSB-209ENST00000470621 KIAA1522Q9P206 1035 aaPredicted RBP9.4□□□□□ -0.9
SSB-209ENST00000470621 SAMM50Q9Y512 469 aa9.4□□□□□ -0.9
SSB-209ENST00000470621 PCDHB5Q9Y5E4 795 aa9.4□□□□□ -0.9
SSB-209ENST00000470621 TMPRSS2O15393 492 aa9.39□□□□□ -0.91
SSB-209ENST00000470621 GAS2O43903 313 aaKnown RBP9.39□□□□□ -0.91
SSB-209ENST00000470621 TSNAXIP1Q2TAA8 658 aa9.39□□□□□ -0.91
SSB-209ENST00000470621 PRR23CQ6ZRP0 262 aa9.39□□□□□ -0.91
SSB-209ENST00000470621 ACSBG1Q96GR2 724 aa9.39□□□□□ -0.91
SSB-209ENST00000470621 CYP8B1Q9UNU6 501 aa9.39□□□□□ -0.91
SSB-209ENST00000470621 BMP3P12645 472 aa9.38□□□□□ -0.91
SSB-209ENST00000470621 TFE3P19532 575 aaPredicted RBP9.38□□□□□ -0.91
SSB-209ENST00000470621 SEPT6Q14141 434 aa9.38□□□□□ -0.91
SSB-209ENST00000470621 CDPF1Q6NVV7 123 aa9.38□□□□□ -0.91
SSB-209ENST00000470621 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.38□□□□□ -0.91
SSB-209ENST00000470621 DYMQ7RTS9 669 aa9.38□□□□□ -0.91
SSB-209ENST00000470621 TMEM87AQ8NBN3 555 aa9.38□□□□□ -0.91
SSB-209ENST00000470621 FAM105AQ9NUU6 356 aa9.38□□□□□ -0.91
SSB-209ENST00000470621 TRIM37O94972 964 aa9.37□□□□□ -0.91
SSB-209ENST00000470621 ITGAEP38570 1179 aa9.37□□□□□ -0.91
SSB-209ENST00000470621 LRRC14Q15048 493 aa9.37□□□□□ -0.91
SSB-209ENST00000470621 AGMOQ6ZNB7 445 aa9.37□□□□□ -0.91
SSB-209ENST00000470621 FAM20CQ8IXL6 584 aa9.37□□□□□ -0.91
SSB-209ENST00000470621 COPRSQ9NQ92 184 aa9.37□□□□□ -0.91
SSB-209ENST00000470621 CDK8P49336 464 aa9.36□□□□□ -0.91
SSB-209ENST00000470621 PHC3Q8NDX5 983 aa9.36□□□□□ -0.91
SSB-209ENST00000470621 FBLIM1Q8WUP2 373 aa9.36□□□□□ -0.91
SSB-209ENST00000470621 FANCD2OSQ96PS1 177 aa9.36□□□□□ -0.91
SSB-209ENST00000470621 KRTAP4-12Q9BQ66 201 aa9.36□□□□□ -0.91
SSB-209ENST00000470621 CRIM1Q9NZV1 1036 aa9.36□□□□□ -0.91
SSB-209ENST00000470621 CSADQ9Y600 493 aa9.36□□□□□ -0.91
SSB-209ENST00000470621 DHX15O43143 795 aaKnown RBP9.35□□□□□ -0.91
SSB-209ENST00000470621 RAB6AP20340 208 aa9.35□□□□□ -0.91
SSB-209ENST00000470621 RPS26P62854 115 aaKnown RBP9.35□□□□□ -0.91
SSB-209ENST00000470621 ID3Q02535 119 aa9.35□□□□□ -0.91
SSB-209ENST00000470621 BCL11AQ9H165 835 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms