RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 ANKRD23Q86SG2 305 aa23.96■■□□□ 1.43
NCKIPSD-209ENST00000470006 FARP2O94887 1054 aaPredicted RBP23.95■■□□□ 1.42
NCKIPSD-209ENST00000470006 CCDC27Q2M243 656 aa23.95■■□□□ 1.42
NCKIPSD-209ENST00000470006 MROH5Q6ZUA9 1318 aa23.94■■□□□ 1.42
NCKIPSD-209ENST00000470006 INPP5BP32019 993 aa23.94■■□□□ 1.42
NCKIPSD-209ENST00000470006 FBXO33Q7Z6M2 555 aa23.94■■□□□ 1.42
NCKIPSD-209ENST00000470006 ZDHHC15Q96MV8 337 aa23.94■■□□□ 1.42
NCKIPSD-209ENST00000470006 ZBTB7BO15156 539 aaPredicted RBP23.93■■□□□ 1.42
NCKIPSD-209ENST00000470006 VAMP4O75379 141 aa23.93■■□□□ 1.42
NCKIPSD-209ENST00000470006 FCGRTP55899 365 aa23.93■■□□□ 1.42
NCKIPSD-209ENST00000470006 PRKCZQ05513 592 aa23.93■■□□□ 1.42
NCKIPSD-209ENST00000470006 SLC4A10Q6U841 1118 aa23.93■■□□□ 1.42
NCKIPSD-209ENST00000470006 U2AF1L4Q8WU68 220 aaKnown RBP23.93■■□□□ 1.42
NCKIPSD-209ENST00000470006 MAST3O60307 1309 aa23.92■■□□□ 1.42
NCKIPSD-209ENST00000470006 IL16Q14005 1332 aa23.92■■□□□ 1.42
NCKIPSD-209ENST00000470006 FANCIQ9NVI1 1328 aa23.92■■□□□ 1.42
NCKIPSD-209ENST00000470006 EVI5O60447 810 aa23.92■■□□□ 1.42
NCKIPSD-209ENST00000470006 METTL24Q5JXM2 366 aa23.92■■□□□ 1.42
NCKIPSD-209ENST00000470006 FKBP1CQ5VVH2 108 aa23.92■■□□□ 1.42
NCKIPSD-209ENST00000470006 APOBEC3HQ6NTF7 200 aaKnown RBP23.91■■□□□ 1.42
NCKIPSD-209ENST00000470006 UBE2Q1Q7Z7E8 422 aa23.91■■□□□ 1.42
NCKIPSD-209ENST00000470006 SLAIN1Q8ND83 568 aa23.91■■□□□ 1.42
NCKIPSD-209ENST00000470006 PARK7Q99497 189 aaKnown RBP23.91■■□□□ 1.42
NCKIPSD-209ENST00000470006 UNC93B1Q9H1C4 597 aa23.91■■□□□ 1.42
NCKIPSD-209ENST00000470006 TFRCP02786 760 aaKnown RBP23.9■■□□□ 1.42
NCKIPSD-209ENST00000470006 EXOSC9Q06265 439 aaKnown RBP23.9■■□□□ 1.42
NCKIPSD-209ENST00000470006 TCP10Q12799 353 aa23.9■■□□□ 1.42
NCKIPSD-209ENST00000470006 MRIQ9BWK5 157 aa23.9■■□□□ 1.42
NCKIPSD-209ENST00000470006 PRO3102Q9H379 93 aa23.9■■□□□ 1.42
NCKIPSD-209ENST00000470006 BCAMP50895 628 aa23.89■■□□□ 1.41
NCKIPSD-209ENST00000470006 SUCLG2Q96I99 432 aa23.89■■□□□ 1.41
NCKIPSD-209ENST00000470006 SALL2Q9Y467 1007 aaPredicted RBP23.89■■□□□ 1.41
NCKIPSD-209ENST00000470006 ADGRA2Q96PE1 1338 aa23.88■■□□□ 1.41
NCKIPSD-209ENST00000470006 MGAMO43451 1857 aa23.88■■□□□ 1.41
NCKIPSD-209ENST00000470006 SGPL1O95470 568 aa23.88■■□□□ 1.41
NCKIPSD-209ENST00000470006 CYP2C8P10632 490 aa23.88■■□□□ 1.41
NCKIPSD-209ENST00000470006 SRCIN1Q9C0H9 1055 aa23.88■■□□□ 1.41
NCKIPSD-209ENST00000470006 GABRQQ9UN88 632 aa23.88■■□□□ 1.41
NCKIPSD-209ENST00000470006 KCNH4Q9UQ05 1017 aa23.88■■□□□ 1.41
NCKIPSD-209ENST00000470006 ADCY3O60266 1144 aa23.87■■□□□ 1.41
NCKIPSD-209ENST00000470006 ALDH1L1O75891 902 aa23.87■■□□□ 1.41
NCKIPSD-209ENST00000470006 ZEB1P37275 1124 aaPredicted RBP23.87■■□□□ 1.41
NCKIPSD-209ENST00000470006 LRRC24Q50LG9 513 aa23.87■■□□□ 1.41
NCKIPSD-209ENST00000470006 HHIPL2Q6UWX4 724 aa23.87■■□□□ 1.41
NCKIPSD-209ENST00000470006 FAM151AQ8WW52 585 aa23.87■■□□□ 1.41
NCKIPSD-209ENST00000470006 STAP2Q9UGK3 403 aa23.87■■□□□ 1.41
NCKIPSD-209ENST00000470006 TAOK2Q9UL54 1235 aa23.87■■□□□ 1.41
NCKIPSD-209ENST00000470006 SUGT1Q9Y2Z0 365 aa23.87■■□□□ 1.41
NCKIPSD-209ENST00000470006 RPAP1Q9BWH6 1393 aaPredicted RBP23.87■■□□□ 1.41
NCKIPSD-209ENST00000470006 A0A1W2PPC1 479 aa23.86■■□□□ 1.41
NCKIPSD-209ENST00000470006 LRCH3Q96II8 777 aa23.86■■□□□ 1.41
NCKIPSD-209ENST00000470006 A0A0C4DFX4 3053 aa23.86■■□□□ 1.41
NCKIPSD-209ENST00000470006 SOX1O00570 391 aaPredicted RBP23.85■■□□□ 1.41
NCKIPSD-209ENST00000470006 BCRP11274 1271 aa23.85■■□□□ 1.41
NCKIPSD-209ENST00000470006 ELNP15502 786 aa23.85■■□□□ 1.41
NCKIPSD-209ENST00000470006 DEFB118Q96PH6 123 aa23.85■■□□□ 1.41
NCKIPSD-209ENST00000470006 ZNF112Q9UJU3 913 aa23.85■■□□□ 1.41
NCKIPSD-209ENST00000470006 COL6A3P12111 3177 aa23.85■■□□□ 1.41
NCKIPSD-209ENST00000470006 PDE8BO95263 885 aa23.84■■□□□ 1.41
NCKIPSD-209ENST00000470006 MOGSQ13724 837 aa23.84■■□□□ 1.41
NCKIPSD-209ENST00000470006 CXCL11O14625 94 aa23.83■■□□□ 1.41
NCKIPSD-209ENST00000470006 INHAP05111 366 aa23.83■■□□□ 1.41
NCKIPSD-209ENST00000470006 IFIT1P09914 478 aaKnown RBP23.83■■□□□ 1.41
NCKIPSD-209ENST00000470006 FLT3LGP49771 235 aa23.83■■□□□ 1.41
NCKIPSD-209ENST00000470006 GPAT2Q6NUI2 795 aa23.83■■□□□ 1.41
NCKIPSD-209ENST00000470006 GADL1Q6ZQY3 521 aa23.83■■□□□ 1.41
NCKIPSD-209ENST00000470006 BICC1Q9H694 974 aaKnown RBP23.83■■□□□ 1.41
NCKIPSD-209ENST00000470006 TNPO2O14787 897 aaKnown RBP23.82■■□□□ 1.4
NCKIPSD-209ENST00000470006 NBPF7P0C2Y1 421 aaPredicted RBP23.82■■□□□ 1.4
NCKIPSD-209ENST00000470006 NOL9Q5SY16 702 aaKnown RBP23.82■■□□□ 1.4
NCKIPSD-209ENST00000470006 FASTKD5Q7L8L6 764 aaKnown RBP23.82■■□□□ 1.4
NCKIPSD-209ENST00000470006 KAZALD1Q96I82 304 aa23.82■■□□□ 1.4
NCKIPSD-209ENST00000470006 SPINK5Q9NQ38 1064 aaPredicted RBP23.82■■□□□ 1.4
NCKIPSD-209ENST00000470006 PICK1Q9NRD5 415 aa23.82■■□□□ 1.4
NCKIPSD-209ENST00000470006 CDC42EP5Q6NZY7 148 aa23.81■■□□□ 1.4
NCKIPSD-209ENST00000470006 WDR66Q8TBY9 1149 aa23.81■■□□□ 1.4
NCKIPSD-209ENST00000470006 ZHX2Q9Y6X8 837 aa23.81■■□□□ 1.4
NCKIPSD-209ENST00000470006 MYH13Q9UKX3 1938 aa23.8■■□□□ 1.4
NCKIPSD-209ENST00000470006 NFIAQ12857 509 aa23.8■■□□□ 1.4
NCKIPSD-209ENST00000470006 SMCR8Q8TEV9 937 aaPredicted RBP23.8■■□□□ 1.4
NCKIPSD-209ENST00000470006 PAWRQ96IZ0 340 aaKnown RBP23.8■■□□□ 1.4
NCKIPSD-209ENST00000470006 USP40Q9NVE5 1235 aa23.8■■□□□ 1.4
NCKIPSD-209ENST00000470006 CUL9Q8IWT3 2517 aa23.8■■□□□ 1.4
NCKIPSD-209ENST00000470006 CAPN2P17655 700 aa23.79■■□□□ 1.4
NCKIPSD-209ENST00000470006 PUM3Q15397 648 aaKnown RBP23.79■■□□□ 1.4
NCKIPSD-209ENST00000470006 DIXDC1Q155Q3 683 aa23.79■■□□□ 1.4
NCKIPSD-209ENST00000470006 CCDC184Q52MB2 194 aa23.79■■□□□ 1.4
NCKIPSD-209ENST00000470006 WDR63Q8IWG1 891 aa23.79■■□□□ 1.4
NCKIPSD-209ENST00000470006 VGLL2Q8N8G2 317 aa23.79■■□□□ 1.4
NCKIPSD-209ENST00000470006 KLHDC4Q8TBB5 520 aa23.79■■□□□ 1.4
NCKIPSD-209ENST00000470006 DAGLAQ9Y4D2 1042 aa23.79■■□□□ 1.4
NCKIPSD-209ENST00000470006 PXYLP1Q8TE99 480 aa23.78■■□□□ 1.4
NCKIPSD-209ENST00000470006 SLC5A1P13866 664 aa23.77■■□□□ 1.4
NCKIPSD-209ENST00000470006 NECAB2Q7Z6G3 386 aa23.77■■□□□ 1.4
NCKIPSD-209ENST00000470006 COA7Q96BR5 231 aa23.77■■□□□ 1.4
NCKIPSD-209ENST00000470006 LAMA3Q16787 3333 aa23.77■■□□□ 1.4
NCKIPSD-209ENST00000470006 A0A0G2JLL6 359 aaPredicted RBP23.76■■□□□ 1.39
NCKIPSD-209ENST00000470006 MNX1P50219 401 aaPredicted RBP23.76■■□□□ 1.39
NCKIPSD-209ENST00000470006 PRRT2Q7Z6L0 340 aaPredicted RBP23.76■■□□□ 1.39
NCKIPSD-209ENST00000470006 ZSCAN29Q8IWY8 852 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms