RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 SLC5A6Q9Y289 635 aa7.52□□□□□ -1.21
SCFD1-205ENST00000469043 DAGLAQ9Y4D2 1042 aa7.52□□□□□ -1.21
SCFD1-205ENST00000469043 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
SCFD1-205ENST00000469043 CARNS1A5YM72 827 aa7.51□□□□□ -1.21
SCFD1-205ENST00000469043 NDUFB5O43674 189 aa7.51□□□□□ -1.21
SCFD1-205ENST00000469043 ITPKAP23677 461 aa7.51□□□□□ -1.21
SCFD1-205ENST00000469043 PTPN12Q05209 780 aaKnown RBP7.51□□□□□ -1.21
SCFD1-205ENST00000469043 USPL1Q5W0Q7 1092 aa7.51□□□□□ -1.21
SCFD1-205ENST00000469043 NFXL1Q6ZNB6 911 aa7.51□□□□□ -1.21
SCFD1-205ENST00000469043 PAK6Q9NQU5 681 aaPredicted RBP7.51□□□□□ -1.21
SCFD1-205ENST00000469043 C1GALT1Q9NS00 363 aa7.51□□□□□ -1.21
SCFD1-205ENST00000469043 SLFN14P0C7P3 912 aa7.5□□□□□ -1.21
SCFD1-205ENST00000469043 HNRNPUQ00839 825 aaKnown RBP eCLIP7.5□□□□□ -1.21
SCFD1-205ENST00000469043 OGFOD2Q6N063 350 aa7.5□□□□□ -1.21
SCFD1-205ENST00000469043 SEZ6L2Q6UXD5 910 aa7.5□□□□□ -1.21
SCFD1-205ENST00000469043 STK11IPQ8N1F8 1099 aa7.5□□□□□ -1.21
SCFD1-205ENST00000469043 LGR6Q9HBX8 967 aa7.5□□□□□ -1.21
SCFD1-205ENST00000469043 H3BRB1 525 aa7.49□□□□□ -1.21
SCFD1-205ENST00000469043 ECEL1O95672 775 aa7.49□□□□□ -1.21
SCFD1-205ENST00000469043 ITGB5P18084 799 aa7.49□□□□□ -1.21
SCFD1-205ENST00000469043 CITED4Q96RK1 184 aa7.49□□□□□ -1.21
SCFD1-205ENST00000469043 WDR18Q9BV38 432 aa7.49□□□□□ -1.21
SCFD1-205ENST00000469043 TUT1Q9H6E5 874 aaKnown RBP7.49□□□□□ -1.21
SCFD1-205ENST00000469043 BIN1O00499 593 aa7.48□□□□□ -1.21
SCFD1-205ENST00000469043 COL19A1Q14993 1142 aa7.48□□□□□ -1.21
SCFD1-205ENST00000469043 RPS26P11Q5JNZ5 115 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-205ENST00000469043 POU5F2Q8N7G0 328 aa7.48□□□□□ -1.21
SCFD1-205ENST00000469043 BCL7CQ8WUZ0 217 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-205ENST00000469043 MISP3Q96FF7 219 aa7.48□□□□□ -1.21
SCFD1-205ENST00000469043 PIDD1Q9HB75 910 aa7.48□□□□□ -1.21
SCFD1-205ENST00000469043 NPHS2Q9NP85 383 aa7.48□□□□□ -1.21
SCFD1-205ENST00000469043 PPP1R9AQ9ULJ8 1098 aa7.48□□□□□ -1.21
SCFD1-205ENST00000469043 USTQ9Y2C2 406 aa7.48□□□□□ -1.21
SCFD1-205ENST00000469043 DYNC1LI2O43237 492 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-205ENST00000469043 GADD45BO75293 160 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-205ENST00000469043 TMC1Q8TDI8 760 aa7.47□□□□□ -1.21
SCFD1-205ENST00000469043 DNAJC25Q9H1X3 360 aa7.47□□□□□ -1.21
SCFD1-205ENST00000469043 ATXN3LQ9H3M9 355 aa7.47□□□□□ -1.21
SCFD1-205ENST00000469043 PPP4R2Q9NY27 417 aa7.47□□□□□ -1.21
SCFD1-205ENST00000469043 TRAK1Q9UPV9 953 aa7.47□□□□□ -1.21
SCFD1-205ENST00000469043 LOC105371045A0A1W2PR82 267 aa7.46□□□□□ -1.22
SCFD1-205ENST00000469043 LIG1P18858 919 aa7.46□□□□□ -1.22
SCFD1-205ENST00000469043 ORC1Q13415 861 aa7.46□□□□□ -1.22
SCFD1-205ENST00000469043 PLCL1Q15111 1095 aa7.46□□□□□ -1.22
SCFD1-205ENST00000469043 CCDC74AQ96AQ1 378 aa7.46□□□□□ -1.22
SCFD1-205ENST00000469043 CRIM1Q9NZV1 1036 aa7.46□□□□□ -1.22
SCFD1-205ENST00000469043 TMEM238LA0A1B0GVL6 79 aa7.45□□□□□ -1.22
SCFD1-205ENST00000469043 TMPRSS2O15393 492 aa7.45□□□□□ -1.22
SCFD1-205ENST00000469043 ARHGAP4P98171 946 aa7.45□□□□□ -1.22
SCFD1-205ENST00000469043 ID3Q02535 119 aa7.45□□□□□ -1.22
SCFD1-205ENST00000469043 ECM1Q16610 540 aa7.45□□□□□ -1.22
SCFD1-205ENST00000469043 PRPF40BQ6NWY9 871 aaKnown RBP7.45□□□□□ -1.22
SCFD1-205ENST00000469043 FAM129BQ96TA1 746 aa7.45□□□□□ -1.22
SCFD1-205ENST00000469043 ABCB6Q9NP58 842 aa7.45□□□□□ -1.22
SCFD1-205ENST00000469043 FAM87AP0C7U9 286 aa7.44□□□□□ -1.22
SCFD1-205ENST00000469043 SERPINB4P48594 390 aa7.44□□□□□ -1.22
SCFD1-205ENST00000469043 ZNF157P51786 506 aaPredicted RBP7.44□□□□□ -1.22
SCFD1-205ENST00000469043 FANCD2OSQ96PS1 177 aa7.44□□□□□ -1.22
SCFD1-205ENST00000469043 ZC3H12CQ9C0D7 883 aaKnown RBP7.44□□□□□ -1.22
SCFD1-205ENST00000469043 NIF3L1Q9GZT8 377 aa7.44□□□□□ -1.22
SCFD1-205ENST00000469043 CCDC86Q9H6F5 360 aaKnown RBP7.44□□□□□ -1.22
SCFD1-205ENST00000469043 EIF1AYO14602 144 aaKnown RBP7.43□□□□□ -1.22
SCFD1-205ENST00000469043 C8AP07357 584 aa7.43□□□□□ -1.22
SCFD1-205ENST00000469043 PPP2R3AQ06190 1150 aa7.43□□□□□ -1.22
SCFD1-205ENST00000469043 ZNF792Q3KQV3 632 aa7.43□□□□□ -1.22
SCFD1-205ENST00000469043 SPRED2Q7Z698 418 aa7.43□□□□□ -1.22
SCFD1-205ENST00000469043 SMYD4Q8IYR2 804 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-205ENST00000469043 NETO1Q8TDF5 533 aa7.43□□□□□ -1.22
SCFD1-205ENST00000469043 KRT82Q9NSB4 513 aa7.43□□□□□ -1.22
SCFD1-205ENST00000469043 RNGTTO60942 597 aaKnown RBP7.42□□□□□ -1.22
SCFD1-205ENST00000469043 BNIP3Q12983 259 aa7.42□□□□□ -1.22
SCFD1-205ENST00000469043 CDK5R2Q13319 367 aa7.42□□□□□ -1.22
SCFD1-205ENST00000469043 DTHD1Q6ZMT9 781 aa7.42□□□□□ -1.22
SCFD1-205ENST00000469043 ZNF574Q6ZN55 896 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-205ENST00000469043 ARHGAP27Q6ZUM4 889 aa7.42□□□□□ -1.22
SCFD1-205ENST00000469043 WDR89Q96FK6 387 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-205ENST00000469043 VAV3Q9UKW4 847 aa7.42□□□□□ -1.22
SCFD1-205ENST00000469043 PCOLCE2Q9UKZ9 415 aa7.42□□□□□ -1.22
SCFD1-205ENST00000469043 ZNF862O60290 1169 aa7.41□□□□□ -1.22
SCFD1-205ENST00000469043 PAPLNO95428 1278 aa7.41□□□□□ -1.22
SCFD1-205ENST00000469043 GSTP1P09211 210 aaKnown RBP7.41□□□□□ -1.22
SCFD1-205ENST00000469043 KIF4BQ2VIQ3 1234 aa7.41□□□□□ -1.22
SCFD1-205ENST00000469043 TRAIPQ9BWF2 469 aa7.41□□□□□ -1.22
SCFD1-205ENST00000469043 SSU72Q9NP77 194 aaKnown RBP7.41□□□□□ -1.22
SCFD1-205ENST00000469043 DISC1Q9NRI5 854 aa7.41□□□□□ -1.22
SCFD1-205ENST00000469043 SHROOM4Q9ULL8 1493 aa7.41□□□□□ -1.22
SCFD1-205ENST00000469043 JAG1P78504 1218 aa7.4□□□□□ -1.22
SCFD1-205ENST00000469043 PRKCQQ04759 706 aa7.4□□□□□ -1.22
SCFD1-205ENST00000469043 FAAP100Q0VG06 881 aa7.4□□□□□ -1.22
SCFD1-205ENST00000469043 GRM2Q14416 872 aa7.4□□□□□ -1.22
SCFD1-205ENST00000469043 ATG4DQ86TL0 474 aaPredicted RBP7.4□□□□□ -1.22
SCFD1-205ENST00000469043 PLD6Q8N2A8 252 aaKnown RBP7.4□□□□□ -1.22
SCFD1-205ENST00000469043 KCNB2Q92953 911 aa7.4□□□□□ -1.22
SCFD1-205ENST00000469043 DMRTB1Q96MA1 342 aa7.4□□□□□ -1.22
SCFD1-205ENST00000469043 CSRNP1Q96S65 589 aa7.4□□□□□ -1.22
SCFD1-205ENST00000469043 MKNK2Q9HBH9 465 aa7.4□□□□□ -1.22
SCFD1-205ENST00000469043 TMEM39AQ9NV64 488 aa7.4□□□□□ -1.22
SCFD1-205ENST00000469043 NLRP2Q9NX02 1062 aa7.4□□□□□ -1.22
SCFD1-205ENST00000469043 GPN3Q9UHW5 284 aaPredicted RBP7.4□□□□□ -1.22
SCFD1-205ENST00000469043 XRCC5P13010 732 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 261.8 ms