RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 CLIC6Q96NY7 704 aa14.98□□□□□ -0.01
PDZRN3-205ENST00000466780 MAP3K14Q99558 947 aa14.98□□□□□ -0.01
PDZRN3-205ENST00000466780 NBPF3Q9H094 633 aa14.98□□□□□ -0.01
PDZRN3-205ENST00000466780 CPDO75976 1380 aa14.98□□□□□ -0.01
PDZRN3-205ENST00000466780 LAMB4A4D0S4 1761 aa14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 PPP6R2O75170 966 aa14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 SEC31AO94979 1220 aaKnown RBP14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 LRRFIP1Q32MZ4 808 aaKnown RBP14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 RALYLQ86SE5 291 aaKnown RBP14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 ALG1Q9BT22 464 aa14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 SRRTQ9BXP5 876 aaKnown RBP14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 EPC1Q9H2F5 836 aa14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 EFCAB8A8MWE9 144 aa14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 TOP1P11387 765 aaKnown RBP14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 BMP6P22004 513 aa14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 CDC27P30260 824 aa14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 PDE4BQ07343 736 aa14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 RESP18Q5W5W9 173 aa14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 KRT40Q6A162 431 aa14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 FCHSD1Q86WN1 690 aa14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 APPBP2Q92624 585 aa14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 XAGE2Q96GT9 111 aa14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 CEP126Q9P2H0 1117 aa14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 PPP2R2CQ9Y2T4 447 aa14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 NUP188Q5SRE5 1749 aa14.97□□□□□ -0.01
PDZRN3-205ENST00000466780 ZNF213O14771 459 aa14.96□□□□□ -0.01
PDZRN3-205ENST00000466780 ZFYP08048 801 aaPredicted RBP14.96□□□□□ -0.01
PDZRN3-205ENST00000466780 ZAP70P43403 619 aa14.96□□□□□ -0.01
PDZRN3-205ENST00000466780 CABP4P57796 275 aa14.96□□□□□ -0.01
PDZRN3-205ENST00000466780 LONRF3Q496Y0 759 aa14.96□□□□□ -0.01
PDZRN3-205ENST00000466780 TTC39AQ5SRH9 613 aa14.96□□□□□ -0.01
PDZRN3-205ENST00000466780 PI16Q6UXB8 463 aa14.96□□□□□ -0.01
PDZRN3-205ENST00000466780 ARGLU1Q9NWB6 273 aaPredicted RBP14.96□□□□□ -0.01
PDZRN3-205ENST00000466780 ZMYM6O95789 1325 aa14.96□□□□□ -0.01
PDZRN3-205ENST00000466780 WDR19Q8NEZ3 1342 aa14.96□□□□□ -0.01
PDZRN3-205ENST00000466780 RXRAP19793 462 aa14.96□□□□□ -0.01
PDZRN3-205ENST00000466780 CCDC158Q5M9N0 1113 aa14.96□□□□□ -0.01
PDZRN3-205ENST00000466780 ATG3Q9NT62 314 aa14.96□□□□□ -0.01
PDZRN3-205ENST00000466780 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.96□□□□□ -0.01
PDZRN3-205ENST00000466780 ARHGAP6O43182 974 aa14.95□□□□□ -0.02
PDZRN3-205ENST00000466780 GPAA1O43292 621 aa14.95□□□□□ -0.02
PDZRN3-205ENST00000466780 TBX2Q13207 712 aaPredicted RBP14.95□□□□□ -0.02
PDZRN3-205ENST00000466780 CYB5R4Q7L1T6 521 aa14.95□□□□□ -0.02
PDZRN3-205ENST00000466780 FAM177A1Q8N128 213 aaPredicted RBP14.95□□□□□ -0.02
PDZRN3-205ENST00000466780 RGS22Q8NE09 1264 aa14.95□□□□□ -0.02
PDZRN3-205ENST00000466780 WDR24Q96S15 920 aa14.95□□□□□ -0.02
PDZRN3-205ENST00000466780 UBXN6Q9BZV1 441 aa14.95□□□□□ -0.02
PDZRN3-205ENST00000466780 ZBTB3Q9H5J0 574 aa14.95□□□□□ -0.02
PDZRN3-205ENST00000466780 SENP2Q9HC62 589 aa14.95□□□□□ -0.02
PDZRN3-205ENST00000466780 TAOK2Q9UL54 1235 aa14.95□□□□□ -0.02
PDZRN3-205ENST00000466780 PCDHA5Q9Y5H7 936 aa14.95□□□□□ -0.02
PDZRN3-205ENST00000466780 FOXN1O15353 648 aa14.95□□□□□ -0.02
PDZRN3-205ENST00000466780 ZSCAN12O43309 604 aa14.95□□□□□ -0.02
PDZRN3-205ENST00000466780 TMEM51Q9NW97 253 aa14.95□□□□□ -0.02
PDZRN3-205ENST00000466780 ADAMTSL3P82987 1691 aa14.95□□□□□ -0.02
PDZRN3-205ENST00000466780 SASH3O75995 380 aa14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 HSP90AA4PQ58FG1 418 aa14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 KRBA2Q6ZNG9 492 aa14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 TBC1D10CQ8IV04 446 aa14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 JMYQ8N9B5 988 aa14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 CCDC191Q8NCU4 936 aa14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 PHKBQ93100 1093 aa14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 ANGEL1Q9UNK9 670 aaKnown RBP14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 TBC1D8O95759 1140 aa14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 A1BGP04217 495 aa14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 METAP2P50579 478 aaKnown RBP eCLIP14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 OLFM4Q6UX06 510 aa14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 CALCOCO1Q9P1Z2 691 aa14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 UBE2Q2LH0YL09 131 aa14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 SH2B2O14492 632 aaPredicted RBP14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 MYO1BO43795 1136 aa14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 MAP3K9P80192 1104 aa14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 MPHOSPH8Q99549 860 aa14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 KCNH3Q9ULD8 1083 aa14.94□□□□□ -0.02
PDZRN3-205ENST00000466780 ECM29Q5VYK3 1845 aa14.93□□□□□ -0.02
PDZRN3-205ENST00000466780 POLR3GO15318 223 aaPredicted RBP14.93□□□□□ -0.02
PDZRN3-205ENST00000466780 IRX5P78411 483 aaPredicted RBP14.93□□□□□ -0.02
PDZRN3-205ENST00000466780 MDM2Q00987 491 aaPredicted RBP14.93□□□□□ -0.02
PDZRN3-205ENST00000466780 CCDC102BQ68D86 513 aa14.93□□□□□ -0.02
PDZRN3-205ENST00000466780 TOGARAM2Q6ZUX3 1019 aa14.93□□□□□ -0.02
PDZRN3-205ENST00000466780 TC2NQ8N9U0 490 aa14.93□□□□□ -0.02
PDZRN3-205ENST00000466780 BAG1Q99933 345 aaPredicted RBP14.93□□□□□ -0.02
PDZRN3-205ENST00000466780 CUTAO60888 179 aa14.93□□□□□ -0.02
PDZRN3-205ENST00000466780 GNG11P61952 73 aa14.93□□□□□ -0.02
PDZRN3-205ENST00000466780 CC2D1AQ6P1N0 951 aaPredicted RBP14.93□□□□□ -0.02
PDZRN3-205ENST00000466780 APOA5Q6Q788 366 aa14.93□□□□□ -0.02
PDZRN3-205ENST00000466780 CNNM3Q8NE01 707 aa14.93□□□□□ -0.02
PDZRN3-205ENST00000466780 MST1RQ04912 1400 aa14.92□□□□□ -0.02
PDZRN3-205ENST00000466780 RANBP6O60518 1105 aaKnown RBP14.92□□□□□ -0.02
PDZRN3-205ENST00000466780 TPM1P09493 284 aa14.92□□□□□ -0.02
PDZRN3-205ENST00000466780 HNRNPH2P55795 449 aaKnown RBP14.92□□□□□ -0.02
PDZRN3-205ENST00000466780 FMR1Q06787 632 aaKnown RBP eCLIP14.92□□□□□ -0.02
PDZRN3-205ENST00000466780 NTRK3Q16288 839 aa14.92□□□□□ -0.02
PDZRN3-205ENST00000466780 SPECC1Q5M775 1068 aa14.92□□□□□ -0.02
PDZRN3-205ENST00000466780 KIFC2Q96AC6 838 aa14.92□□□□□ -0.02
PDZRN3-205ENST00000466780 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.92□□□□□ -0.02
PDZRN3-205ENST00000466780 MRFAP1Q9Y605 127 aa14.92□□□□□ -0.02
PDZRN3-205ENST00000466780 COL18A1P39060 1754 aa14.92□□□□□ -0.02
PDZRN3-205ENST00000466780 ATP8B1O43520 1251 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms