RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 PFKFB2O60825 505 aa7.45□□□□□ -1.22
SIK3-207ENST00000465421 PDIA6Q15084 440 aa7.45□□□□□ -1.22
SIK3-207ENST00000465421 CCDC8Q9H0W5 538 aaPredicted RBP7.45□□□□□ -1.22
SIK3-207ENST00000465421 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.45□□□□□ -1.22
SIK3-207ENST00000465421 COL14A1Q05707 1796 aaKnown RBP7.45□□□□□ -1.22
SIK3-207ENST00000465421 ERC1Q8IUD2 1116 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 CLASRPQ8N2M8 674 aaKnown RBP7.44□□□□□ -1.22
SIK3-207ENST00000465421 DNAAF4Q8WXU2 420 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 DHX58Q96C10 678 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 RTEL1Q9NZ71 1219 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 HDAC5Q9UQL6 1122 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 RFX7Q2KHR2 1363 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 ARAP2Q8WZ64 1704 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 A0A1B0GVL5 298 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 GOLGA6L9A6NEM1 432 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 TAF5LO75529 589 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 GOLGA8FQ08AF8 430 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 GOLGA8DPQ0D2H9 430 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 HSP90AA4PQ58FG1 418 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 ZNF530Q6P9A1 599 aaPredicted RBP7.44□□□□□ -1.22
SIK3-207ENST00000465421 Q6ZUG5 572 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 HDXQ7Z353 690 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 STK11IPQ8N1F8 1099 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 EDC3Q96F86 508 aaKnown RBP7.44□□□□□ -1.22
SIK3-207ENST00000465421 ZNF396Q96N95 335 aaPredicted RBP7.44□□□□□ -1.22
SIK3-207ENST00000465421 PNKPQ96T60 521 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 BOLA2Q9H3K6 86 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 DBF4Q9UBU7 674 aaPredicted RBP7.44□□□□□ -1.22
SIK3-207ENST00000465421 FAN1Q9Y2M0 1017 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 ME1P48163 572 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 GNL2Q13823 731 aaKnown RBP7.44□□□□□ -1.22
SIK3-207ENST00000465421 SART3Q15020 963 aaKnown RBP7.44□□□□□ -1.22
SIK3-207ENST00000465421 CT47A1Q5JQC4 288 aaPredicted RBP7.44□□□□□ -1.22
SIK3-207ENST00000465421 EFCAB13Q8IY85 973 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 GPATCH3Q96I76 525 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 CEP89Q96ST8 783 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 TOMM22Q9NS69 142 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 INTS13Q9NVM9 706 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 AXIN2Q9Y2T1 843 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 SH3BP1Q9Y3L3 701 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 ITGB4P16144 1822 aa7.44□□□□□ -1.22
SIK3-207ENST00000465421 BTBD11A6QL63 1104 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 LMOD1P29536 600 aaPredicted RBP7.43□□□□□ -1.22
SIK3-207ENST00000465421 GNG11P61952 73 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 KRT32Q14532 448 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 MCTP2Q6DN12 878 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 MMS22LQ6ZRQ5 1243 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 TOGARAM2Q6ZUX3 1019 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 SRGAP1Q7Z6B7 1085 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 CHPF2Q9P2E5 772 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 ZNF831Q5JPB2 1677 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 NWD2Q9ULI1 1742 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 TMEM232C9JQI7 657 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 CUTAO60888 179 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 CHGBP05060 677 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 PRR29P0C7W0 189 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 ZRSR1Q15695 479 aaKnown RBP7.43□□□□□ -1.22
SIK3-207ENST00000465421 KSR2Q6VAB6 950 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 AACSQ86V21 672 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 RAB11FIP4Q86YS3 637 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 LINC00301Q8NCQ3 95 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 LRRC59Q96AG4 307 aaKnown RBP7.43□□□□□ -1.22
SIK3-207ENST00000465421 NEK1Q96PY6 1258 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 SDF4Q9BRK5 362 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 TUBE1Q9UJT0 475 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 LAMB2P55268 1798 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 KCNQ3O43525 872 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 STX10O60499 249 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 UBASH3AP57075 661 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 AIMP1Q12904 312 aaKnown RBP7.43□□□□□ -1.22
SIK3-207ENST00000465421 FAM71BQ8TC56 605 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 AGXT2Q9BYV1 514 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 SUGCTQ9HAC7 445 aa7.43□□□□□ -1.22
SIK3-207ENST00000465421 COL5A2P05997 1499 aaPredicted RBP7.42□□□□□ -1.22
SIK3-207ENST00000465421 PTPDC1A2A3K4 754 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 CBFA2T2O43439 604 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 PPFIA4O75335 1185 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 CHMP4BP1P59074 171 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 MCM6Q14566 821 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 TADA2BQ86TJ2 420 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 TC2NQ8N9U0 490 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 KLHDC4Q8TBB5 520 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 RBM33Q96EV2 1170 aaKnown RBP7.42□□□□□ -1.22
SIK3-207ENST00000465421 FSD1Q9BTV5 496 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 DEF6Q9H4E7 631 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 ZSWIM4Q9H7M6 989 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 ABCB6Q9NP58 842 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 DDX21Q9NR30 783 aaKnown RBP eCLIP7.42□□□□□ -1.22
SIK3-207ENST00000465421 LRP5O75197 1615 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 NRAPQ86VF7 1730 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 MYO1BO43795 1136 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 SASH1O94885 1247 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 SLC3A2P08195 630 aaKnown RBP7.42□□□□□ -1.22
SIK3-207ENST00000465421 CCDC172P0C7W6 258 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 PHKG2P15735 406 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 CCT2P78371 535 aaKnown RBP7.42□□□□□ -1.22
SIK3-207ENST00000465421 EAF2Q96CJ1 260 aaPredicted RBP7.42□□□□□ -1.22
SIK3-207ENST00000465421 SEC62Q99442 399 aaKnown RBP7.42□□□□□ -1.22
SIK3-207ENST00000465421 SLC52A2Q9HAB3 445 aa7.42□□□□□ -1.22
SIK3-207ENST00000465421 A0A087WUV0 522 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms