RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 LINC00301Q8NCQ3 95 aa4.4□□□□□ -1.7
CCNL1-204ENST00000464316 LRRN4CLQ8ND94 238 aa4.4□□□□□ -1.7
CCNL1-204ENST00000464316 SIRT1Q96EB6 747 aa4.4□□□□□ -1.7
CCNL1-204ENST00000464316 WDR24Q96S15 920 aa4.4□□□□□ -1.7
CCNL1-204ENST00000464316 IL25Q9H293 177 aa4.4□□□□□ -1.7
CCNL1-204ENST00000464316 A1CFQ9NQ94 594 aaKnown RBP4.4□□□□□ -1.7
CCNL1-204ENST00000464316 RNF216Q9NWF9 866 aaPredicted RBP4.4□□□□□ -1.7
CCNL1-204ENST00000464316 NPATQ14207 1427 aa4.4□□□□□ -1.7
CCNL1-204ENST00000464316 HSF2BPO75031 334 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 HOXB7P09629 217 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 GUCY1B3Q02153 619 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 SPAG1Q07617 926 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 NEXNQ0ZGT2 675 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 ARFGAP2Q8N6H7 521 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 FAM227BQ96M60 508 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 EPC1Q9H2F5 836 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 CENPHQ9H3R5 247 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 GOLPH3LQ9H4A5 285 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 C19orf44Q9H6X5 657 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 RAI14Q9P0K7 980 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 MYO6Q9UM54 1294 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 CAPN7Q9Y6W3 813 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 ATP7BP35670 1465 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 TULP4Q9NRJ4 1543 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 GOLGA6L10A6NI86 522 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 WASLO00401 505 aaPredicted RBP4.4□□□□□ -1.71
CCNL1-204ENST00000464316 POLR3DP05423 398 aaPredicted RBP4.4□□□□□ -1.71
CCNL1-204ENST00000464316 SLC8A1P32418 973 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 CCT2P78371 535 aaKnown RBP4.4□□□□□ -1.71
CCNL1-204ENST00000464316 TEFQ10587 303 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 TRIM14Q14142 442 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 ZKSCAN8Q15776 578 aaPredicted RBP4.4□□□□□ -1.71
CCNL1-204ENST00000464316 IMMTQ16891 758 aaKnown RBP4.4□□□□□ -1.71
CCNL1-204ENST00000464316 RNF187Q5TA31 235 aaPredicted RBP4.4□□□□□ -1.71
CCNL1-204ENST00000464316 WDR93Q6P2C0 686 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 RALYLQ86SE5 291 aaKnown RBP4.4□□□□□ -1.71
CCNL1-204ENST00000464316 TRIML1Q8N9V2 468 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 NSUN7Q8NE18 718 aaKnown RBP4.4□□□□□ -1.71
CCNL1-204ENST00000464316 NUDT16Q96DE0 195 aaKnown RBP4.4□□□□□ -1.71
CCNL1-204ENST00000464316 FANCLQ9NW38 375 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 ZNHIT6Q9NWK9 470 aaKnown RBP4.4□□□□□ -1.71
CCNL1-204ENST00000464316 AKAP2Q9Y2D5 859 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 QSER1Q2KHR3 1735 aa4.4□□□□□ -1.71
CCNL1-204ENST00000464316 GOLIM4O00461 696 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 MYCNP04198 464 aaPredicted RBP4.39□□□□□ -1.71
CCNL1-204ENST00000464316 PFKFB1P16118 471 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 IDI1Q13907 227 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 NBPF14Q5TI25 921 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 MYSM1Q5VVJ2 828 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 ISM2Q6H9L7 571 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 AMOTL1Q8IY63 956 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 ENOX1Q8TC92 643 aaKnown RBP4.39□□□□□ -1.71
CCNL1-204ENST00000464316 RSRC1Q96IZ7 334 aaKnown RBP4.39□□□□□ -1.71
CCNL1-204ENST00000464316 JPH2Q9BR39 696 aaPredicted RBP4.39□□□□□ -1.71
CCNL1-204ENST00000464316 ESF1Q9H501 851 aaKnown RBP4.39□□□□□ -1.71
CCNL1-204ENST00000464316 ODF2LQ9ULJ1 636 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 NFE2L3Q9Y4A8 694 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 ADGRB1O14514 1584 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 TARSL2A2RTX5 802 aaKnown RBP4.39□□□□□ -1.71
CCNL1-204ENST00000464316 TAF5LO75529 589 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 ATP1A3P13637 1013 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 GBP2P32456 591 aaPredicted RBP4.39□□□□□ -1.71
CCNL1-204ENST00000464316 AARSP49588 968 aaKnown RBP eCLIP4.39□□□□□ -1.71
CCNL1-204ENST00000464316 KRT83P78385 493 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 IRX1P78414 480 aaPredicted RBP4.39□□□□□ -1.71
CCNL1-204ENST00000464316 APBA1Q02410 837 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 ST3GAL1Q11201 340 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 SCRN1Q12765 414 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 CEP85LQ5SZL2 805 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 CYP26C1Q6V0L0 522 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 IGSF22Q8N9C0 903 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 COG1Q8WTW3 980 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 CCDC8Q9H0W5 538 aaPredicted RBP4.39□□□□□ -1.71
CCNL1-204ENST00000464316 SNRKQ9NRH2 765 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 WWC3Q9ULE0 1092 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 CEP131Q9UPN4 1083 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 KIF1AQ12756 1690 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 PI4KAP2A4QPH2 592 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 KRT86O43790 486 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 DTNBO60941 627 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 PPP6R2O75170 966 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 NBPF7P0C2Y1 421 aaPredicted RBP4.39□□□□□ -1.71
CCNL1-204ENST00000464316 ERCC5P28715 1186 aaPredicted RBP4.39□□□□□ -1.71
CCNL1-204ENST00000464316 ELF1P32519 619 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 ADKP55263 362 aaKnown RBP4.39□□□□□ -1.71
CCNL1-204ENST00000464316 GNGT1P63211 74 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 IFFO1Q0D2I5 559 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 DRP2Q13474 957 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 SLC39A14Q15043 492 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 CCDC121Q6ZUS5 278 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 ANKRD18AQ8IVF6 992 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 PI4KAP1Q8N8J0 262 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 CPLX3Q8WVH0 158 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 WASF1Q92558 559 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 CCDC114Q96M63 670 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 TUBE1Q9UJT0 475 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 ADGRG1Q9Y653 693 aa4.39□□□□□ -1.71
CCNL1-204ENST00000464316 CPS1P31327 1500 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 EXOC5O00471 708 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 ADD1P35611 737 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms