RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 FAM83AQ86UY5 434 aa19.75■□□□□ 0.75
SND1-203ENST00000463020 TBC1D22AQ8WUA7 517 aa19.75■□□□□ 0.75
SND1-203ENST00000463020 RPAP1Q9BWH6 1393 aaPredicted RBP19.74■□□□□ 0.75
SND1-203ENST00000463020 FRAT2O75474 233 aaPredicted RBP19.74■□□□□ 0.75
SND1-203ENST00000463020 DIXDC1Q155Q3 683 aa19.74■□□□□ 0.75
SND1-203ENST00000463020 CAVIN4Q5BKX8 364 aa19.74■□□□□ 0.75
SND1-203ENST00000463020 MRPL50Q8N5N7 158 aaKnown RBP19.74■□□□□ 0.75
SND1-203ENST00000463020 LAMA3Q16787 3333 aa19.73■□□□□ 0.75
SND1-203ENST00000463020 SLURP2P0DP57 97 aa19.73■□□□□ 0.75
SND1-203ENST00000463020 RFX5P48382 616 aaPredicted RBP19.73■□□□□ 0.75
SND1-203ENST00000463020 ZFPM1Q8IX07 1006 aa19.73■□□□□ 0.75
SND1-203ENST00000463020 PDHXO00330 501 aa19.72■□□□□ 0.75
SND1-203ENST00000463020 OSBPP22059 807 aa19.72■□□□□ 0.75
SND1-203ENST00000463020 TCP10Q12799 353 aa19.72■□□□□ 0.75
SND1-203ENST00000463020 FKBP1CQ5VVH2 108 aa19.72■□□□□ 0.75
SND1-203ENST00000463020 CDC42EP5Q6NZY7 148 aa19.72■□□□□ 0.75
SND1-203ENST00000463020 MRIQ9BWK5 157 aa19.72■□□□□ 0.75
SND1-203ENST00000463020 ZNF341Q9BYN7 854 aa19.72■□□□□ 0.75
SND1-203ENST00000463020 USP44Q9H0E7 712 aa19.72■□□□□ 0.75
SND1-203ENST00000463020 ZCCHC17Q9NP64 241 aaKnown RBP19.72■□□□□ 0.75
SND1-203ENST00000463020 DAGLAQ9Y4D2 1042 aa19.72■□□□□ 0.75
SND1-203ENST00000463020 ZNF521Q96K83 1311 aa19.72■□□□□ 0.75
SND1-203ENST00000463020 PSMC4P43686 418 aa19.71■□□□□ 0.75
SND1-203ENST00000463020 PPATQ06203 517 aa19.71■□□□□ 0.75
SND1-203ENST00000463020 ARHGEF6Q15052 776 aa19.71■□□□□ 0.75
SND1-203ENST00000463020 PUM3Q15397 648 aaKnown RBP19.71■□□□□ 0.75
SND1-203ENST00000463020 HHIPL2Q6UWX4 724 aa19.71■□□□□ 0.75
SND1-203ENST00000463020 CHRDL2Q6WN34 429 aa19.71■□□□□ 0.75
SND1-203ENST00000463020 TMOD2Q9NZR1 351 aa19.71■□□□□ 0.75
SND1-203ENST00000463020 FAM198AQ9UFP1 575 aa19.71■□□□□ 0.75
SND1-203ENST00000463020 SRRDQ9UH36 339 aa19.71■□□□□ 0.75
SND1-203ENST00000463020 ZNF112Q9UJU3 913 aa19.71■□□□□ 0.75
SND1-203ENST00000463020 KCNH4Q9UQ05 1017 aa19.71■□□□□ 0.75
SND1-203ENST00000463020 PRDX5P30044 214 aa19.7■□□□□ 0.74
SND1-203ENST00000463020 GPAT2Q6NUI2 795 aa19.7■□□□□ 0.74
SND1-203ENST00000463020 ATG9AQ7Z3C6 839 aa19.7■□□□□ 0.74
SND1-203ENST00000463020 UBE2Q1Q7Z7E8 422 aa19.7■□□□□ 0.74
SND1-203ENST00000463020 ANKRD23Q86SG2 305 aa19.7■□□□□ 0.74
SND1-203ENST00000463020 ATRNL1Q5VV63 1379 aa19.7■□□□□ 0.74
SND1-203ENST00000463020 CYP2C8P10632 490 aa19.69■□□□□ 0.74
SND1-203ENST00000463020 KIF22Q14807 665 aa19.69■□□□□ 0.74
SND1-203ENST00000463020 DCAF15Q66K64 600 aa19.69■□□□□ 0.74
SND1-203ENST00000463020 FAM151AQ8WW52 585 aa19.69■□□□□ 0.74
SND1-203ENST00000463020 KIF16BQ96L93 1317 aa19.69■□□□□ 0.74
SND1-203ENST00000463020 FAM9BQ8IZU0 186 aa19.68■□□□□ 0.74
SND1-203ENST00000463020 RBM27Q9P2N5 1060 aaKnown RBP19.68■□□□□ 0.74
SND1-203ENST00000463020 GABRQQ9UN88 632 aa19.68■□□□□ 0.74
SND1-203ENST00000463020 SUGT1Q9Y2Z0 365 aa19.68■□□□□ 0.74
SND1-203ENST00000463020 MYH13Q9UKX3 1938 aa19.67■□□□□ 0.74
SND1-203ENST00000463020 EYA2O00167 538 aa19.67■□□□□ 0.74
SND1-203ENST00000463020 IFIT1P09914 478 aaKnown RBP19.67■□□□□ 0.74
SND1-203ENST00000463020 PRKCZQ05513 592 aa19.67■□□□□ 0.74
SND1-203ENST00000463020 SSH1Q8WYL5 1049 aa19.67■□□□□ 0.74
SND1-203ENST00000463020 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.67■□□□□ 0.74
SND1-203ENST00000463020 COL6A3P12111 3177 aa19.67■□□□□ 0.74
SND1-203ENST00000463020 MAST3O60307 1309 aa19.67■□□□□ 0.74
SND1-203ENST00000463020 MYPNQ86TC9 1320 aa19.67■□□□□ 0.74
SND1-203ENST00000463020 FMNL1O95466 1100 aaPredicted RBP19.66■□□□□ 0.74
SND1-203ENST00000463020 GNRH1P01148 92 aa19.66■□□□□ 0.74
SND1-203ENST00000463020 BCRP11274 1271 aa19.66■□□□□ 0.74
SND1-203ENST00000463020 CCL5P13501 91 aa19.66■□□□□ 0.74
SND1-203ENST00000463020 GRK4P32298 578 aa19.66■□□□□ 0.74
SND1-203ENST00000463020 NOL9Q5SY16 702 aaKnown RBP19.66■□□□□ 0.74
SND1-203ENST00000463020 SH3BP5LQ7L8J4 393 aa19.66■□□□□ 0.74
SND1-203ENST00000463020 PHF20L1A8MW92 1017 aa19.65■□□□□ 0.74
SND1-203ENST00000463020 PRMT2P55345 433 aa19.65■□□□□ 0.74
SND1-203ENST00000463020 HOOK2Q96ED9 719 aa19.65■□□□□ 0.74
SND1-203ENST00000463020 SIL1Q9H173 461 aa19.65■□□□□ 0.74
SND1-203ENST00000463020 RFX7Q2KHR2 1363 aa19.65■□□□□ 0.74
SND1-203ENST00000463020 WDHD1O75717 1129 aaPredicted RBP19.64■□□□□ 0.73
SND1-203ENST00000463020 SLC5A1P13866 664 aa19.64■□□□□ 0.73
SND1-203ENST00000463020 GJA8P48165 433 aa19.64■□□□□ 0.73
SND1-203ENST00000463020 WDR66Q8TBY9 1149 aa19.64■□□□□ 0.73
SND1-203ENST00000463020 RAET1EQ8TD07 263 aa19.64■□□□□ 0.73
SND1-203ENST00000463020 LPIN2Q92539 896 aa19.64■□□□□ 0.73
SND1-203ENST00000463020 DPF3Q92784 378 aa19.64■□□□□ 0.73
SND1-203ENST00000463020 UNC93B1Q9H1C4 597 aa19.64■□□□□ 0.73
SND1-203ENST00000463020 PRO3102Q9H379 93 aa19.64■□□□□ 0.73
SND1-203ENST00000463020 USP40Q9NVE5 1235 aa19.64■□□□□ 0.73
SND1-203ENST00000463020 PTPRCP08575 1304 aa19.63■□□□□ 0.73
SND1-203ENST00000463020 CENPBP07199 599 aaPredicted RBP19.63■□□□□ 0.73
SND1-203ENST00000463020 ADORA1P30542 326 aa19.63■□□□□ 0.73
SND1-203ENST00000463020 PHKA1P46020 1223 aa19.63■□□□□ 0.73
SND1-203ENST00000463020 CCDC84Q86UT8 332 aaPredicted RBP19.63■□□□□ 0.73
SND1-203ENST00000463020 ANP32CO43423 234 aa19.62■□□□□ 0.73
SND1-203ENST00000463020 RNF208Q9H0X6 261 aa19.62■□□□□ 0.73
SND1-203ENST00000463020 DDX4Q9NQI0 724 aaKnown RBP19.62■□□□□ 0.73
SND1-203ENST00000463020 MGAMO43451 1857 aa19.62■□□□□ 0.73
SND1-203ENST00000463020 DOCK2Q92608 1830 aa19.62■□□□□ 0.73
SND1-203ENST00000463020 GJB1P08034 283 aa19.61■□□□□ 0.73
SND1-203ENST00000463020 ELNP15502 786 aa19.61■□□□□ 0.73
SND1-203ENST00000463020 RGS3P49796 1198 aa19.61■□□□□ 0.73
SND1-203ENST00000463020 ATP2B3Q16720 1220 aa19.61■□□□□ 0.73
SND1-203ENST00000463020 PA2G4Q9UQ80 394 aaKnown RBP19.61■□□□□ 0.73
SND1-203ENST00000463020 AK9Q5TCS8 1911 aa19.61■□□□□ 0.73
SND1-203ENST00000463020 A0A0C4DFX4 3053 aa19.6■□□□□ 0.73
SND1-203ENST00000463020 A0A0G2JLL6 359 aaPredicted RBP19.6■□□□□ 0.73
SND1-203ENST00000463020 DDTLA6NHG4 134 aaPredicted RBP19.6■□□□□ 0.73
SND1-203ENST00000463020 LDHBP07195 334 aaKnown RBP19.6■□□□□ 0.73
SND1-203ENST00000463020 PTPRAP18433 802 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms