RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 CERS3Q8IU89 383 aa13.36□□□□□ -0.27
TRAPPC3-205ENST00000462715 FBXO18Q8NFZ0 1043 aa13.36□□□□□ -0.27
TRAPPC3-205ENST00000462715 KLHDC4Q8TBB5 520 aa13.36□□□□□ -0.27
TRAPPC3-205ENST00000462715 L2HGDHQ9H9P8 463 aa13.36□□□□□ -0.27
TRAPPC3-205ENST00000462715 EYA2O00167 538 aa13.35□□□□□ -0.27
TRAPPC3-205ENST00000462715 KIF1CO43896 1103 aaKnown RBP13.35□□□□□ -0.27
TRAPPC3-205ENST00000462715 CHRNDQ07001 517 aa13.35□□□□□ -0.27
TRAPPC3-205ENST00000462715 POLA2Q14181 598 aa13.35□□□□□ -0.27
TRAPPC3-205ENST00000462715 FILIP1Q7Z7B0 1213 aa13.35□□□□□ -0.27
TRAPPC3-205ENST00000462715 ZNF446Q9NWS9 450 aa13.35□□□□□ -0.27
TRAPPC3-205ENST00000462715 GGA1Q9UJY5 639 aa13.35□□□□□ -0.27
TRAPPC3-205ENST00000462715 ZRANB2O95218 330 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRAPPC3-205ENST00000462715 IVLP07476 585 aa13.35□□□□□ -0.27
TRAPPC3-205ENST00000462715 NEK4P51957 841 aa13.35□□□□□ -0.27
TRAPPC3-205ENST00000462715 SWT1Q5T5J6 900 aaKnown RBP13.35□□□□□ -0.27
TRAPPC3-205ENST00000462715 MNS1Q8NEH6 495 aa13.35□□□□□ -0.27
TRAPPC3-205ENST00000462715 RTFDC1Q9BY42 306 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC3-205ENST00000462715 SIL1Q9H173 461 aa13.35□□□□□ -0.27
TRAPPC3-205ENST00000462715 RIPOR2Q9Y4F9 1068 aa13.35□□□□□ -0.27
TRAPPC3-205ENST00000462715 C6orf229H3BNL8 230 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 PNMA6AP0CW24 399 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 ATP2B4P23634 1241 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 IL15P40933 162 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 ZNF75DP51815 510 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 RASSF7Q02833 373 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 METTL24Q5JXM2 366 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 SYT10Q6XYQ8 523 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 SRLQ86TD4 932 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 SLC51AQ86UW1 340 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 SUGP1Q8IWZ8 645 aaKnown RBP13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 TDRD7Q8NHU6 1098 aaKnown RBP13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 EYA3Q99504 573 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 PUS3Q9BZE2 481 aaKnown RBP13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 OSBPL3Q9H4L5 887 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 PA2G4Q9UQ80 394 aaKnown RBP13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 LEMD3Q9Y2U8 911 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 UFL1O94874 794 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 LMNB1P20700 586 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 PLA2G4AP47712 749 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 LRRC24Q50LG9 513 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 SIRT2Q8IXJ6 389 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 SPC24Q8NBT2 197 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 EXOC4Q96A65 974 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 VPS33BQ9H267 617 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 CEP83Q9Y592 693 aa13.34□□□□□ -0.27
TRAPPC3-205ENST00000462715 ZSCAN22P10073 491 aaPredicted RBP13.33□□□□□ -0.27
TRAPPC3-205ENST00000462715 G3BP1Q13283 466 aaKnown RBP eCLIP13.33□□□□□ -0.27
TRAPPC3-205ENST00000462715 ZSCAN26Q16670 478 aa13.33□□□□□ -0.27
TRAPPC3-205ENST00000462715 TBC1D16Q8TBP0 767 aa13.33□□□□□ -0.27
TRAPPC3-205ENST00000462715 LTBP1Q14766 1721 aa13.33□□□□□ -0.27
TRAPPC3-205ENST00000462715 SDSP20132 328 aa13.33□□□□□ -0.28
TRAPPC3-205ENST00000462715 MAGEA9P43362 315 aa13.33□□□□□ -0.28
TRAPPC3-205ENST00000462715 KCNJ6P48051 423 aa13.33□□□□□ -0.28
TRAPPC3-205ENST00000462715 OS9Q13438 667 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC3-205ENST00000462715 ELF2Q15723 593 aa13.33□□□□□ -0.28
TRAPPC3-205ENST00000462715 SARM1Q6SZW1 724 aa13.33□□□□□ -0.28
TRAPPC3-205ENST00000462715 KRBA2Q6ZNG9 492 aa13.33□□□□□ -0.28
TRAPPC3-205ENST00000462715 ZNF277Q9NRM2 450 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC3-205ENST00000462715 DUOX1Q9NRD9 1551 aa13.33□□□□□ -0.28
TRAPPC3-205ENST00000462715 RPS6KA5O75582 802 aa13.32□□□□□ -0.28
TRAPPC3-205ENST00000462715 SURF6O75683 361 aaKnown RBP13.32□□□□□ -0.28
TRAPPC3-205ENST00000462715 CCDC172P0C7W6 258 aa13.32□□□□□ -0.28
TRAPPC3-205ENST00000462715 IARSP41252 1262 aaKnown RBP13.32□□□□□ -0.28
TRAPPC3-205ENST00000462715 NAA30Q147X3 362 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC3-205ENST00000462715 HSP90AB4PQ58FF6 505 aa13.32□□□□□ -0.28
TRAPPC3-205ENST00000462715 CCDC91Q7Z6B0 441 aa13.32□□□□□ -0.28
TRAPPC3-205ENST00000462715 SRRTQ9BXP5 876 aaKnown RBP13.32□□□□□ -0.28
TRAPPC3-205ENST00000462715 CEP126Q9P2H0 1117 aa13.32□□□□□ -0.28
TRAPPC3-205ENST00000462715 JRKLQ9Y4A0 524 aa13.32□□□□□ -0.28
TRAPPC3-205ENST00000462715 ZNF804BA4D1E1 1349 aa13.32□□□□□ -0.28
TRAPPC3-205ENST00000462715 SMARCA5O60264 1052 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC3-205ENST00000462715 MAPK8IP2Q13387 824 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC3-205ENST00000462715 WASHC4Q2M389 1173 aa13.32□□□□□ -0.28
TRAPPC3-205ENST00000462715 ATG9AQ7Z3C6 839 aa13.32□□□□□ -0.28
TRAPPC3-205ENST00000462715 HELBQ8NG08 1087 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC3-205ENST00000462715 POLLQ9UGP5 575 aa13.32□□□□□ -0.28
TRAPPC3-205ENST00000462715 A0A1B0GUL6 1792 aa13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 LOC102724159A0A0B4J2E5 919 aa13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 PPIP5K2O43314 1243 aa13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 TAF5LO75529 589 aa13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 PDE8BO95263 885 aa13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 PWP2Q15269 919 aaKnown RBP13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 ZC3H12CQ9C0D7 883 aaKnown RBP13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 DEF6Q9H4E7 631 aa13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 RNF181Q9P0P0 153 aa13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 ATP2B1P20020 1258 aa13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 PLCB2Q00722 1185 aa13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 UBE4AQ14139 1066 aa13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 TTC31Q49AM3 519 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 TMCO3Q6UWJ1 677 aa13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 RBM43Q6ZSC3 357 aaKnown RBP13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 ERC1Q8IUD2 1116 aa13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 LARGE2Q8N3Y3 721 aa13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 MRFAP1L1Q96HT8 127 aa13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 CHAMP1Q96JM3 812 aa13.31□□□□□ -0.28
TRAPPC3-205ENST00000462715 MED23Q9ULK4 1368 aa13.3□□□□□ -0.28
TRAPPC3-205ENST00000462715 TCHHQ07283 1943 aa13.3□□□□□ -0.28
TRAPPC3-205ENST00000462715 GSCP56915 257 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC3-205ENST00000462715 PUM3Q15397 648 aaKnown RBP13.3□□□□□ -0.28
TRAPPC3-205ENST00000462715 MAP3K11Q16584 847 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms