RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 TEPSINQ96N21 525 aa27.62■■■□□ 2.01
TRAF4-207ENST00000461195 TMEM39BQ9GZU3 492 aa27.62■■■□□ 2.01
TRAF4-207ENST00000461195 FZD1Q9UP38 647 aa27.62■■■□□ 2.01
TRAF4-207ENST00000461195 KIF23Q02241 960 aaPredicted RBP27.61■■■□□ 2.01
TRAF4-207ENST00000461195 FAM83AQ86UY5 434 aa27.61■■■□□ 2.01
TRAF4-207ENST00000461195 EAF2Q96CJ1 260 aaPredicted RBP27.61■■■□□ 2.01
TRAF4-207ENST00000461195 CCDC8Q9H0W5 538 aaPredicted RBP27.6■■■□□ 2.01
TRAF4-207ENST00000461195 TSKSQ9UJT2 592 aa27.6■■■□□ 2.01
TRAF4-207ENST00000461195 DBNLQ9UJU6 430 aaKnown RBP27.6■■■□□ 2.01
TRAF4-207ENST00000461195 CDC42EP5Q6NZY7 148 aa27.59■■■□□ 2.01
TRAF4-207ENST00000461195 ZNF512BQ96KM6 892 aaPredicted RBP27.59■■■□□ 2.01
TRAF4-207ENST00000461195 GAKO14976 1311 aa27.59■■■□□ 2.01
TRAF4-207ENST00000461195 AKAP11Q9UKA4 1901 aa27.59■■■□□ 2.01
TRAF4-207ENST00000461195 CA12O43570 354 aa27.58■■■□□ 2.01
TRAF4-207ENST00000461195 IREB2P48200 963 aaKnown RBP27.58■■■□□ 2.01
TRAF4-207ENST00000461195 TBC1D9Q6ZT07 1266 aa27.58■■■□□ 2.01
TRAF4-207ENST00000461195 CDAN1Q8IWY9 1227 aa27.58■■■□□ 2.01
TRAF4-207ENST00000461195 RHPN1Q8TCX5 695 aa27.58■■■□□ 2.01
TRAF4-207ENST00000461195 FAM163AQ96GL9 167 aaPredicted RBP27.58■■■□□ 2.01
TRAF4-207ENST00000461195 USP40Q9NVE5 1235 aa27.58■■■□□ 2.01
TRAF4-207ENST00000461195 TLR7Q9NYK1 1049 aaKnown RBP27.58■■■□□ 2.01
TRAF4-207ENST00000461195 UNCXA6NJT0 531 aa27.57■■■□□ 2
TRAF4-207ENST00000461195 USP2O75604 605 aaPredicted RBP27.57■■■□□ 2
TRAF4-207ENST00000461195 RRP1P56182 461 aaKnown RBP27.57■■■□□ 2
TRAF4-207ENST00000461195 MECOMQ03112 1051 aa27.57■■■□□ 2
TRAF4-207ENST00000461195 AACSQ86V21 672 aa27.57■■■□□ 2
TRAF4-207ENST00000461195 REM2Q8IYK8 340 aaPredicted RBP27.57■■■□□ 2
TRAF4-207ENST00000461195 KIF1BPQ96EK5 621 aa27.57■■■□□ 2
TRAF4-207ENST00000461195 IL1RAPL2Q9NP60 686 aa27.56■■■□□ 2
TRAF4-207ENST00000461195 SNRKQ9NRH2 765 aa27.56■■■□□ 2
TRAF4-207ENST00000461195 APBB1O00213 710 aa27.55■■■□□ 2
TRAF4-207ENST00000461195 RAB11FIP3O75154 756 aa27.55■■■□□ 2
TRAF4-207ENST00000461195 GSTO1P78417 241 aa27.55■■■□□ 2
TRAF4-207ENST00000461195 SLC10A4Q96EP9 437 aa27.55■■■□□ 2
TRAF4-207ENST00000461195 CSRNP1Q96S65 589 aa27.55■■■□□ 2
TRAF4-207ENST00000461195 RAI14Q9P0K7 980 aa27.55■■■□□ 2
TRAF4-207ENST00000461195 LRP2BPQ9P2M1 347 aa27.55■■■□□ 2
TRAF4-207ENST00000461195 MROH7-TTC4A0A0A0MT08 1334 aa27.55■■■□□ 2
TRAF4-207ENST00000461195 RPAP1Q9BWH6 1393 aaPredicted RBP27.55■■■□□ 2
TRAF4-207ENST00000461195 ANKRD13AQ8IZ07 590 aa27.54■■■□□ 2
TRAF4-207ENST00000461195 CLASRPQ8N2M8 674 aaKnown RBP27.54■■■□□ 2
TRAF4-207ENST00000461195 FAM151AQ8WW52 585 aa27.54■■■□□ 2
TRAF4-207ENST00000461195 NSUN4Q96CB9 384 aaKnown RBP27.54■■■□□ 2
TRAF4-207ENST00000461195 HOOK2Q96ED9 719 aa27.54■■■□□ 2
TRAF4-207ENST00000461195 LDHCP07864 332 aa27.53■■■□□ 2
TRAF4-207ENST00000461195 ZNF384Q8TF68 577 aa27.53■■■□□ 2
TRAF4-207ENST00000461195 CLMNQ96JQ2 1002 aa27.53■■■□□ 2
TRAF4-207ENST00000461195 OTOFQ9HC10 1997 aa27.53■■■□□ 2
TRAF4-207ENST00000461195 AK9Q5TCS8 1911 aa27.52■■■□□ 2
TRAF4-207ENST00000461195 CCDC85CA6NKD9 419 aa27.52■■■□□ 2
TRAF4-207ENST00000461195 BTDP43251 543 aa27.52■■■□□ 2
TRAF4-207ENST00000461195 TCP10Q12799 353 aa27.52■■■□□ 2
TRAF4-207ENST00000461195 NFIAQ12857 509 aa27.52■■■□□ 2
TRAF4-207ENST00000461195 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.52■■■□□ 2
TRAF4-207ENST00000461195 MAST2Q6P0Q8 1798 aa27.51■■□□□ 1.99
TRAF4-207ENST00000461195 GPR75-ASB3A0A0A6YYF3 556 aa27.51■■□□□ 1.99
TRAF4-207ENST00000461195 CYP2E1P05181 493 aaPredicted RBP27.51■■□□□ 1.99
TRAF4-207ENST00000461195 ZAP70P43403 619 aa27.51■■□□□ 1.99
TRAF4-207ENST00000461195 MKRN3Q13064 507 aaKnown RBP27.51■■□□□ 1.99
TRAF4-207ENST00000461195 SPRYD7Q5W111 196 aa27.51■■□□□ 1.99
TRAF4-207ENST00000461195 FAM198AQ9UFP1 575 aa27.51■■□□□ 1.99
TRAF4-207ENST00000461195 CASP8AP2Q9UKL3 1982 aa27.5■■□□□ 1.99
TRAF4-207ENST00000461195 IDI2Q9BXS1 227 aa27.5■■□□□ 1.99
TRAF4-207ENST00000461195 SAGE1Q9NXZ1 904 aa27.5■■□□□ 1.99
TRAF4-207ENST00000461195 MYO5AQ9Y4I1 1855 aaKnown RBP27.49■■□□□ 1.99
TRAF4-207ENST00000461195 IGSF3O75054 1194 aa27.49■■□□□ 1.99
TRAF4-207ENST00000461195 DCAF15Q66K64 600 aa27.49■■□□□ 1.99
TRAF4-207ENST00000461195 ENTPD3O75355 529 aa27.48■■□□□ 1.99
TRAF4-207ENST00000461195 IFIT2P09913 472 aaKnown RBP27.48■■□□□ 1.99
TRAF4-207ENST00000461195 ZBTB48P10074 688 aaPredicted RBP27.48■■□□□ 1.99
TRAF4-207ENST00000461195 RGS3P49796 1198 aa27.48■■□□□ 1.99
TRAF4-207ENST00000461195 MAP3K9P80192 1104 aa27.48■■□□□ 1.99
TRAF4-207ENST00000461195 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.48■■□□□ 1.991e-6■□□□□ 8.2
TRAF4-207ENST00000461195 WNK4Q96J92 1243 aa27.48■■□□□ 1.99
TRAF4-207ENST00000461195 RNF186Q9NXI6 227 aa27.48■■□□□ 1.99
TRAF4-207ENST00000461195 RFX7Q2KHR2 1363 aa27.48■■□□□ 1.99
TRAF4-207ENST00000461195 MAP4K4O95819 1239 aaPredicted RBP27.47■■□□□ 1.99
TRAF4-207ENST00000461195 SREBF2Q12772 1141 aa27.47■■□□□ 1.99
TRAF4-207ENST00000461195 NAA16Q6N069 864 aaPredicted RBP27.47■■□□□ 1.99
TRAF4-207ENST00000461195 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.47■■□□□ 1.99
TRAF4-207ENST00000461195 WDHD1O75717 1129 aaPredicted RBP27.46■■□□□ 1.99
TRAF4-207ENST00000461195 TRPA1O75762 1119 aa27.46■■□□□ 1.99
TRAF4-207ENST00000461195 TM4SF4P48230 202 aa27.46■■□□□ 1.99
TRAF4-207ENST00000461195 RHBDL3P58872 404 aa27.46■■□□□ 1.99
TRAF4-207ENST00000461195 BCL11AQ9H165 835 aa27.46■■□□□ 1.99
TRAF4-207ENST00000461195 ELP3Q9H9T3 547 aa27.46■■□□□ 1.99
TRAF4-207ENST00000461195 PIH1D3Q9NQM4 214 aaKnown RBP27.46■■□□□ 1.99
TRAF4-207ENST00000461195 CSADQ9Y600 493 aa27.46■■□□□ 1.99
TRAF4-207ENST00000461195 LAMB1P07942 1786 aa27.45■■□□□ 1.99
TRAF4-207ENST00000461195 VGLL4Q14135 290 aa27.45■■□□□ 1.98
TRAF4-207ENST00000461195 ZFPM1Q8IX07 1006 aa27.45■■□□□ 1.98
TRAF4-207ENST00000461195 NOL10Q9BSC4 688 aaKnown RBP27.45■■□□□ 1.98
TRAF4-207ENST00000461195 ZNF341Q9BYN7 854 aa27.45■■□□□ 1.98
TRAF4-207ENST00000461195 DOCK2Q92608 1830 aa27.44■■□□□ 1.98
TRAF4-207ENST00000461195 MANSC4A6NHS7 340 aaPredicted RBP27.44■■□□□ 1.98
TRAF4-207ENST00000461195 MIGA2Q7L4E1 593 aa27.44■■□□□ 1.98
TRAF4-207ENST00000461195 WRNIP1Q96S55 665 aa27.44■■□□□ 1.98
TRAF4-207ENST00000461195 LRRCC1Q9C099 1032 aa27.44■■□□□ 1.98
TRAF4-207ENST00000461195 MCOLN1Q9GZU1 580 aa27.44■■□□□ 1.98
TRAF4-207ENST00000461195 PICALMQ13492 652 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms