RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 BCO2Q9BYV7 579 aa6.73□□□□□ -1.33
SF3A3-202ENST00000460925 POGKQ9P215 609 aa6.73□□□□□ -1.33
SF3A3-202ENST00000460925 TOPAZ1Q8N9V7 1692 aa6.73□□□□□ -1.33
SF3A3-202ENST00000460925 FAM135BQ49AJ0 1406 aa6.73□□□□□ -1.33
SF3A3-202ENST00000460925 H7C1W4 665 aa6.72□□□□□ -1.33
SF3A3-202ENST00000460925 POLR3DP05423 398 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-202ENST00000460925 USP17L7P0C7H9 530 aa6.72□□□□□ -1.33
SF3A3-202ENST00000460925 EDN3P14138 238 aa6.72□□□□□ -1.33
SF3A3-202ENST00000460925 SOX18P35713 384 aa6.72□□□□□ -1.33
SF3A3-202ENST00000460925 TNP2Q05952 138 aa6.72□□□□□ -1.33
SF3A3-202ENST00000460925 SFSWAPQ12872 951 aaKnown RBP6.72□□□□□ -1.33
SF3A3-202ENST00000460925 CCSER2Q9H7U1 834 aa6.72□□□□□ -1.33
SF3A3-202ENST00000460925 ATP13A2Q9NQ11 1180 aa6.72□□□□□ -1.33
SF3A3-202ENST00000460925 SALL4Q9UJQ4 1053 aa6.72□□□□□ -1.33
SF3A3-202ENST00000460925 DDX41Q9UJV9 622 aaKnown RBP6.72□□□□□ -1.33
SF3A3-202ENST00000460925 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-202ENST00000460925 ADGRL3Q9HAR2 1447 aa6.72□□□□□ -1.33
SF3A3-202ENST00000460925 CDC42BPGQ6DT37 1551 aa6.72□□□□□ -1.33
SF3A3-202ENST00000460925 ITSN1Q15811 1721 aa6.71□□□□□ -1.34
SF3A3-202ENST00000460925 SASH3O75995 380 aa6.71□□□□□ -1.34
SF3A3-202ENST00000460925 KIF4AO95239 1232 aa6.71□□□□□ -1.34
SF3A3-202ENST00000460925 MAP3K6O95382 1288 aa6.71□□□□□ -1.34
SF3A3-202ENST00000460925 PTSQ03393 145 aa6.71□□□□□ -1.34
SF3A3-202ENST00000460925 GRM2Q14416 872 aa6.71□□□□□ -1.34
SF3A3-202ENST00000460925 LAPTM4AQ15012 233 aa6.71□□□□□ -1.34
SF3A3-202ENST00000460925 PEAR1Q5VY43 1037 aaPredicted RBP6.71□□□□□ -1.34
SF3A3-202ENST00000460925 PRPF40BQ6NWY9 871 aaKnown RBP6.71□□□□□ -1.34
SF3A3-202ENST00000460925 NXPE4Q6UWF7 544 aa6.71□□□□□ -1.34
SF3A3-202ENST00000460925 HS2ST1Q7LGA3 356 aa6.71□□□□□ -1.34
SF3A3-202ENST00000460925 TRIM22Q8IYM9 498 aa6.71□□□□□ -1.34
SF3A3-202ENST00000460925 GLIS3Q8NEA6 775 aa6.71□□□□□ -1.34
SF3A3-202ENST00000460925 UBXN4Q92575 508 aa6.71□□□□□ -1.34
SF3A3-202ENST00000460925 GMLQ99445 158 aa6.71□□□□□ -1.34
SF3A3-202ENST00000460925 NUCKS1Q9H1E3 243 aaKnown RBP6.71□□□□□ -1.34
SF3A3-202ENST00000460925 AAASQ9NRG9 546 aa6.71□□□□□ -1.34
SF3A3-202ENST00000460925 ATP7BP35670 1465 aa6.71□□□□□ -1.34
SF3A3-202ENST00000460925 KIF7Q2M1P5 1343 aa6.71□□□□□ -1.34
SF3A3-202ENST00000460925 WASHC2AQ641Q2 1341 aa6.71□□□□□ -1.34
SF3A3-202ENST00000460925 A0A1W2PP55 124 aa6.7□□□□□ -1.34
SF3A3-202ENST00000460925 GFRA3O60609 400 aa6.7□□□□□ -1.34
SF3A3-202ENST00000460925 MMP20O60882 483 aa6.7□□□□□ -1.34
SF3A3-202ENST00000460925 GADD45BO75293 160 aaPredicted RBP6.7□□□□□ -1.34
SF3A3-202ENST00000460925 MAPTP10636 758 aaKnown RBP6.7□□□□□ -1.34
SF3A3-202ENST00000460925 HSP90B1P14625 803 aaKnown RBP6.7□□□□□ -1.34
SF3A3-202ENST00000460925 TARSP26639 723 aaKnown RBP6.7□□□□□ -1.34
SF3A3-202ENST00000460925 GSTT1P30711 240 aa6.7□□□□□ -1.34
SF3A3-202ENST00000460925 ERMP1Q7Z2K6 904 aa6.7□□□□□ -1.34
SF3A3-202ENST00000460925 ZNF654Q8IZM8 581 aa6.7□□□□□ -1.34
SF3A3-202ENST00000460925 NOC4LQ9BVI4 516 aaKnown RBP6.7□□□□□ -1.34
SF3A3-202ENST00000460925 SRA1Q9HD15 236 aaKnown RBP6.7□□□□□ -1.34
SF3A3-202ENST00000460925 PPP4R2Q9NY27 417 aa6.7□□□□□ -1.34
SF3A3-202ENST00000460925 ZFATQ9P243 1243 aa6.7□□□□□ -1.34
SF3A3-202ENST00000460925 PRR36Q9H6K5 1346 aa6.7□□□□□ -1.34
SF3A3-202ENST00000460925 CCDC7Q96M83 1385 aa6.69□□□□□ -1.34
SF3A3-202ENST00000460925 SBNO2Q9Y2G9 1366 aa6.69□□□□□ -1.34
SF3A3-202ENST00000460925 AKAP12Q02952 1782 aa6.69□□□□□ -1.34
SF3A3-202ENST00000460925 KHNYNO15037 678 aaKnown RBP6.69□□□□□ -1.34
SF3A3-202ENST00000460925 BNIP3LO60238 219 aa6.69□□□□□ -1.34
SF3A3-202ENST00000460925 CYP2E1P05181 493 aaPredicted RBP6.69□□□□□ -1.34
SF3A3-202ENST00000460925 XRCC5P13010 732 aaKnown RBP6.69□□□□□ -1.34
SF3A3-202ENST00000460925 FAM182BQ5T319 152 aa6.69□□□□□ -1.34
SF3A3-202ENST00000460925 MEI1Q5TIA1 1274 aa6.69□□□□□ -1.34
SF3A3-202ENST00000460925 C3orf58Q8NDZ4 430 aa6.69□□□□□ -1.34
SF3A3-202ENST00000460925 ACBD3Q9H3P7 528 aa6.69□□□□□ -1.34
SF3A3-202ENST00000460925 STRN4Q9NRL3 753 aa6.69□□□□□ -1.34
SF3A3-202ENST00000460925 TLR7Q9NYK1 1049 aaKnown RBP6.69□□□□□ -1.34
SF3A3-202ENST00000460925 MARK1Q9P0L2 795 aa6.69□□□□□ -1.34
SF3A3-202ENST00000460925 HCN2Q9UL51 889 aa6.69□□□□□ -1.34
SF3A3-202ENST00000460925 PPM1HQ9ULR3 514 aa6.69□□□□□ -1.34
SF3A3-202ENST00000460925 PHF20L1A8MW92 1017 aa6.68□□□□□ -1.34
SF3A3-202ENST00000460925 RARAP10276 462 aa6.68□□□□□ -1.34
SF3A3-202ENST00000460925 RACK1P63244 317 aaKnown RBP6.68□□□□□ -1.34
SF3A3-202ENST00000460925 GNL2Q13823 731 aaKnown RBP6.68□□□□□ -1.34
SF3A3-202ENST00000460925 DBN1Q16643 649 aa6.68□□□□□ -1.34
SF3A3-202ENST00000460925 RIPOR1Q6ZS17 1223 aa6.68□□□□□ -1.34
SF3A3-202ENST00000460925 USP48Q86UV5 1035 aa6.68□□□□□ -1.34
SF3A3-202ENST00000460925 KIFC2Q96AC6 838 aa6.68□□□□□ -1.34
SF3A3-202ENST00000460925 ARMC5Q96C12 935 aa6.68□□□□□ -1.34
SF3A3-202ENST00000460925 CDK19Q9BWU1 502 aa6.68□□□□□ -1.34
SF3A3-202ENST00000460925 EHD4Q9H223 541 aa6.68□□□□□ -1.34
SF3A3-202ENST00000460925 GGT7Q9UJ14 662 aa6.68□□□□□ -1.34
SF3A3-202ENST00000460925 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.68□□□□□ -1.34
SF3A3-202ENST00000460925 MST1RQ04912 1400 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 MON2Q7Z3U7 1717 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 NRKQ7Z2Y5 1582 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 DCDC2BA2VCK2 349 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 TMF1P82094 1093 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 SPEM2Q0P670 501 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 HYAL2Q12891 473 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 ZNF394Q53GI3 561 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 CCNJLQ8IV13 435 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 CCDC155Q8N6L0 562 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 DDX17Q92841 729 aaKnown RBP6.67□□□□□ -1.34
SF3A3-202ENST00000460925 TCF12Q99081 682 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 ZFYVE1Q9HBF4 777 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 SENP2Q9HC62 589 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 LATS2Q9NRM7 1088 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 CUEDC1Q9NWM3 386 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-202ENST00000460925 KANSL3Q9P2N6 904 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 ATXN7L1Q9ULK2 861 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms