RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 ARID4AP29374 1257 aaPredicted RBP23.33■■□□□ 1.33
COL5A1-203ENST00000460264 GJA5P36382 358 aa23.33■■□□□ 1.33
COL5A1-203ENST00000460264 OS9Q13438 667 aaPredicted RBP23.33■■□□□ 1.33
COL5A1-203ENST00000460264 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.33■■□□□ 1.33
COL5A1-203ENST00000460264 DZIP1Q86YF9 867 aaKnown RBP23.33■■□□□ 1.33
COL5A1-203ENST00000460264 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.33■■□□□ 1.33
COL5A1-203ENST00000460264 GPR108Q9NPR9 543 aa23.33■■□□□ 1.33
COL5A1-203ENST00000460264 HMG20BQ9P0W2 317 aa23.33■■□□□ 1.33
COL5A1-203ENST00000460264 GAKO14976 1311 aa23.33■■□□□ 1.32
COL5A1-203ENST00000460264 TBC1D8O95759 1140 aa23.32■■□□□ 1.32
COL5A1-203ENST00000460264 CEP85Q6P2H3 762 aa23.32■■□□□ 1.32
COL5A1-203ENST00000460264 PI16Q6UXB8 463 aa23.32■■□□□ 1.32
COL5A1-203ENST00000460264 MCOLN1Q9GZU1 580 aa23.32■■□□□ 1.32
COL5A1-203ENST00000460264 ELP3Q9H9T3 547 aa23.32■■□□□ 1.32
COL5A1-203ENST00000460264 NOP58Q9Y2X3 529 aaKnown RBP23.32■■□□□ 1.32
COL5A1-203ENST00000460264 MAST2Q6P0Q8 1798 aa23.32■■□□□ 1.32
COL5A1-203ENST00000460264 MS4A1P11836 297 aa23.31■■□□□ 1.32
COL5A1-203ENST00000460264 NFIAQ12857 509 aa23.31■■□□□ 1.32
COL5A1-203ENST00000460264 VGLL4Q14135 290 aa23.31■■□□□ 1.32
COL5A1-203ENST00000460264 TNNI3KQ59H18 835 aa23.31■■□□□ 1.32
COL5A1-203ENST00000460264 SPTY2D1Q68D10 685 aaPredicted RBP23.31■■□□□ 1.32
COL5A1-203ENST00000460264 SPATA5Q8NB90 893 aa23.31■■□□□ 1.32
COL5A1-203ENST00000460264 FAM151AQ8WW52 585 aa23.31■■□□□ 1.32
COL5A1-203ENST00000460264 HOOK2Q96ED9 719 aa23.31■■□□□ 1.32
COL5A1-203ENST00000460264 USP40Q9NVE5 1235 aa23.31■■□□□ 1.32
COL5A1-203ENST00000460264 RCAN3Q9UKA8 241 aa23.31■■□□□ 1.32
COL5A1-203ENST00000460264 FPGT-TNNI3KV9GXZ4 949 aa23.31■■□□□ 1.32
COL5A1-203ENST00000460264 RFX7Q2KHR2 1363 aa23.3■■□□□ 1.32
COL5A1-203ENST00000460264 INHBEP58166 350 aa23.3■■□□□ 1.32
COL5A1-203ENST00000460264 MAP3K9P80192 1104 aa23.3■■□□□ 1.32
COL5A1-203ENST00000460264 DGKZQ13574 1117 aa23.3■■□□□ 1.32
COL5A1-203ENST00000460264 OPTNQ96CV9 577 aa23.3■■□□□ 1.32
COL5A1-203ENST00000460264 CFHR5Q9BXR6 569 aa23.3■■□□□ 1.32
COL5A1-203ENST00000460264 FAM198AQ9UFP1 575 aa23.3■■□□□ 1.32
COL5A1-203ENST00000460264 MCAMP43121 646 aa23.29■■□□□ 1.32
COL5A1-203ENST00000460264 TCP10Q12799 353 aa23.29■■□□□ 1.32
COL5A1-203ENST00000460264 IFNL1Q8IU54 200 aa23.29■■□□□ 1.32
COL5A1-203ENST00000460264 SLF2Q8IX21 1173 aa23.29■■□□□ 1.32
COL5A1-203ENST00000460264 FAM163AQ96GL9 167 aaPredicted RBP23.29■■□□□ 1.32
COL5A1-203ENST00000460264 CSADQ9Y600 493 aa23.29■■□□□ 1.32
COL5A1-203ENST00000460264 ALDH1A1P00352 501 aa23.28■■□□□ 1.32
COL5A1-203ENST00000460264 UQCRFS1P1P0C7P4 283 aa23.28■■□□□ 1.32
COL5A1-203ENST00000460264 MECOMQ03112 1051 aa23.28■■□□□ 1.32
COL5A1-203ENST00000460264 DCAF15Q66K64 600 aa23.28■■□□□ 1.32
COL5A1-203ENST00000460264 ERICH6Q7L0X2 663 aa23.28■■□□□ 1.32
COL5A1-203ENST00000460264 ZNF384Q8TF68 577 aa23.28■■□□□ 1.32
COL5A1-203ENST00000460264 CNKSR2Q8WXI2 1034 aa23.28■■□□□ 1.32
COL5A1-203ENST00000460264 WRNIP1Q96S55 665 aa23.28■■□□□ 1.32
COL5A1-203ENST00000460264 DBNDD2Q9BQY9 259 aa23.28■■□□□ 1.32
COL5A1-203ENST00000460264 MROH7-TTC4A0A0A0MT08 1334 aa23.28■■□□□ 1.32
COL5A1-203ENST00000460264 MYO5AQ9Y4I1 1855 aaKnown RBP23.28■■□□□ 1.32
COL5A1-203ENST00000460264 IGF2BP3O00425 579 aaKnown RBP eCLIP23.27■■□□□ 1.32
COL5A1-203ENST00000460264 NOM1Q5C9Z4 860 aaKnown RBP23.27■■□□□ 1.32
COL5A1-203ENST00000460264 TBC1D9Q6ZT07 1266 aa23.27■■□□□ 1.32
COL5A1-203ENST00000460264 SNCAIPQ9Y6H5 919 aa23.27■■□□□ 1.32
COL5A1-203ENST00000460264 BTDP43251 543 aa23.26■■□□□ 1.31
COL5A1-203ENST00000460264 ZNF296Q8WUU4 475 aaPredicted RBP23.26■■□□□ 1.31
COL5A1-203ENST00000460264 R3HDMLQ9H3Y0 253 aa23.26■■□□□ 1.31
COL5A1-203ENST00000460264 TESPA1A2RU30 521 aaPredicted RBP23.25■■□□□ 1.31
COL5A1-203ENST00000460264 SPDYE5A6NIY4 337 aa23.25■■□□□ 1.31
COL5A1-203ENST00000460264 GPR25O00155 361 aa23.25■■□□□ 1.31
COL5A1-203ENST00000460264 RGS3P49796 1198 aa23.25■■□□□ 1.31
COL5A1-203ENST00000460264 TTC39AQ5SRH9 613 aa23.25■■□□□ 1.31
COL5A1-203ENST00000460264 MIGA2Q7L4E1 593 aa23.25■■□□□ 1.31
COL5A1-203ENST00000460264 ZFPM1Q8IX07 1006 aa23.25■■□□□ 1.31
COL5A1-203ENST00000460264 ZKSCAN4Q969J2 545 aaPredicted RBP23.25■■□□□ 1.31
COL5A1-203ENST00000460264 IDI2Q9BXS1 227 aa23.25■■□□□ 1.31
COL5A1-203ENST00000460264 ZNF341Q9BYN7 854 aa23.25■■□□□ 1.31
COL5A1-203ENST00000460264 DDX19BQ9UMR2 479 aa23.25■■□□□ 1.31
COL5A1-203ENST00000460264 COG6Q9Y2V7 657 aa23.25■■□□□ 1.31
COL5A1-203ENST00000460264 CCDC158Q5M9N0 1113 aa23.24■■□□□ 1.31
COL5A1-203ENST00000460264 CTU1Q7Z7A3 348 aaKnown RBP23.24■■□□□ 1.31
COL5A1-203ENST00000460264 NSUN4Q96CB9 384 aaKnown RBP23.24■■□□□ 1.31
COL5A1-203ENST00000460264 OTUD5Q96G74 571 aa23.24■■□□□ 1.31
COL5A1-203ENST00000460264 MS4A4AQ96JQ5 239 aa23.24■■□□□ 1.31
COL5A1-203ENST00000460264 DBNLQ9UJU6 430 aaKnown RBP23.24■■□□□ 1.31
COL5A1-203ENST00000460264 ATRNL1Q5VV63 1379 aa23.24■■□□□ 1.31
COL5A1-203ENST00000460264 GPR75-ASB3A0A0A6YYF3 556 aa23.23■■□□□ 1.31
COL5A1-203ENST00000460264 ENTPD3O75355 529 aa23.23■■□□□ 1.31
COL5A1-203ENST00000460264 WDHD1O75717 1129 aaPredicted RBP23.23■■□□□ 1.31
COL5A1-203ENST00000460264 GSTO1P78417 241 aa23.23■■□□□ 1.31
COL5A1-203ENST00000460264 PTPN18Q99952 460 aa23.23■■□□□ 1.31
COL5A1-203ENST00000460264 ZBTB40Q9NUA8 1239 aa23.23■■□□□ 1.31
COL5A1-203ENST00000460264 TLR7Q9NYK1 1049 aaKnown RBP23.23■■□□□ 1.31
COL5A1-203ENST00000460264 RAI14Q9P0K7 980 aa23.23■■□□□ 1.31
COL5A1-203ENST00000460264 EXOC6BQ9Y2D4 811 aa23.23■■□□□ 1.31
COL5A1-203ENST00000460264 ERO1BQ86YB8 467 aa23.22■■□□□ 1.31
COL5A1-203ENST00000460264 EAF2Q96CJ1 260 aaPredicted RBP23.22■■□□□ 1.31
COL5A1-203ENST00000460264 ZNF512BQ96KM6 892 aaPredicted RBP23.22■■□□□ 1.31
COL5A1-203ENST00000460264 DDX4Q9NQI0 724 aaKnown RBP23.22■■□□□ 1.31
COL5A1-203ENST00000460264 SNRKQ9NRH2 765 aa23.22■■□□□ 1.31
COL5A1-203ENST00000460264 CDK5RAP2Q96SN8 1893 aa23.22■■□□□ 1.31
COL5A1-203ENST00000460264 INPP5BP32019 993 aa23.21■■□□□ 1.31
COL5A1-203ENST00000460264 GTF2A2P52657 109 aa23.21■■□□□ 1.31
COL5A1-203ENST00000460264 RHBDL3P58872 404 aa23.21■■□□□ 1.31
COL5A1-203ENST00000460264 OTUD7BQ6GQQ9 843 aa23.21■■□□□ 1.31
COL5A1-203ENST00000460264 ERC1Q8IUD2 1116 aa23.21■■□□□ 1.31
COL5A1-203ENST00000460264 BRI3BPQ8WY22 251 aa23.21■■□□□ 1.31
COL5A1-203ENST00000460264 CCDC8Q9H0W5 538 aaPredicted RBP23.21■■□□□ 1.31
COL5A1-203ENST00000460264 LRP2BPQ9P2M1 347 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms