RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 NAA16Q6N069 864 aaPredicted RBP15.6■□□□□ 0.09
COL18A1-206ENST00000459895 ZNF70Q9UC06 446 aaPredicted RBP15.6■□□□□ 0.09
COL18A1-206ENST00000459895 MYO1BO43795 1136 aa15.59■□□□□ 0.09
COL18A1-206ENST00000459895 GLRX3O76003 335 aaKnown RBP15.59■□□□□ 0.09
COL18A1-206ENST00000459895 MAP4K4O95819 1239 aaPredicted RBP15.59■□□□□ 0.09
COL18A1-206ENST00000459895 PDE6AP16499 860 aa15.59■□□□□ 0.09
COL18A1-206ENST00000459895 TTF1Q15361 905 aaPredicted RBP15.59■□□□□ 0.09
COL18A1-206ENST00000459895 CENPQQ7L2Z9 268 aaPredicted RBP15.59■□□□□ 0.09
COL18A1-206ENST00000459895 USP48Q86UV5 1035 aa15.59■□□□□ 0.09
COL18A1-206ENST00000459895 SULF1Q8IWU6 871 aa15.59■□□□□ 0.09
COL18A1-206ENST00000459895 MAGEB6Q8N7X4 407 aa15.59■□□□□ 0.09
COL18A1-206ENST00000459895 STAP2Q9UGK3 403 aa15.59■□□□□ 0.09
COL18A1-206ENST00000459895 RPAP1Q9BWH6 1393 aaPredicted RBP15.59■□□□□ 0.09
COL18A1-206ENST00000459895 ERC2O15083 957 aa15.58■□□□□ 0.08
COL18A1-206ENST00000459895 CHGBP05060 677 aa15.58■□□□□ 0.08
COL18A1-206ENST00000459895 GSTO1P78417 241 aa15.58■□□□□ 0.08
COL18A1-206ENST00000459895 CDC42EP5Q6NZY7 148 aa15.58■□□□□ 0.08
COL18A1-206ENST00000459895 PLEKHM2Q8IWE5 1019 aa15.58■□□□□ 0.08
COL18A1-206ENST00000459895 CDAN1Q8IWY9 1227 aa15.58■□□□□ 0.08
COL18A1-206ENST00000459895 CDCA5Q96FF9 252 aa15.58■□□□□ 0.08
COL18A1-206ENST00000459895 CCDC136Q96JN2 1154 aa15.58■□□□□ 0.08
COL18A1-206ENST00000459895 MRIQ9BWK5 157 aa15.58■□□□□ 0.08
COL18A1-206ENST00000459895 MYH1P12882 1939 aa15.58■□□□□ 0.08
COL18A1-206ENST00000459895 TCP10L2B9ZVM9 353 aa15.57■□□□□ 0.08
COL18A1-206ENST00000459895 MAP3K12Q12852 859 aa15.57■□□□□ 0.08
COL18A1-206ENST00000459895 NFIAQ12857 509 aa15.57■□□□□ 0.08
COL18A1-206ENST00000459895 SLFNL1Q499Z3 407 aa15.57■□□□□ 0.08
COL18A1-206ENST00000459895 CDC37L1Q7L3B6 337 aa15.57■□□□□ 0.08
COL18A1-206ENST00000459895 SKAP1Q86WV1 359 aa15.57■□□□□ 0.08
COL18A1-206ENST00000459895 SLF2Q8IX21 1173 aa15.57■□□□□ 0.08
COL18A1-206ENST00000459895 GPR75-ASB3A0A0A6YYF3 556 aa15.56■□□□□ 0.08
COL18A1-206ENST00000459895 TCRBV5S4A2TA0A5A2 114 aa15.56■□□□□ 0.08
COL18A1-206ENST00000459895 CYP7A1P22680 504 aa15.56■□□□□ 0.08
COL18A1-206ENST00000459895 RHBDL3P58872 404 aa15.56■□□□□ 0.08
COL18A1-206ENST00000459895 KBTBD3Q8NAB2 608 aa15.56■□□□□ 0.08
COL18A1-206ENST00000459895 MIGA1Q8NAN2 632 aa15.56■□□□□ 0.08
COL18A1-206ENST00000459895 FAM163AQ96GL9 167 aaPredicted RBP15.56■□□□□ 0.08
COL18A1-206ENST00000459895 ZNF408Q9H9D4 720 aa15.56■□□□□ 0.08
COL18A1-206ENST00000459895 AATFQ9NY61 560 aaKnown RBP eCLIP15.56■□□□□ 0.08
COL18A1-206ENST00000459895 TMOD2Q9NZR1 351 aa15.56■□□□□ 0.08
COL18A1-206ENST00000459895 ZNF532Q9HCE3 1301 aa15.56■□□□□ 0.08
COL18A1-206ENST00000459895 COL2A1P02458 1487 aaPredicted RBP15.56■□□□□ 0.08
COL18A1-206ENST00000459895 ATAD5Q96QE3 1844 aa15.56■□□□□ 0.08
COL18A1-206ENST00000459895 BAZ2AQ9UIF9 1905 aaKnown RBP15.55■□□□□ 0.08
COL18A1-206ENST00000459895 DOCK1Q14185 1865 aa15.55■□□□□ 0.08
COL18A1-206ENST00000459895 ADD2P35612 726 aa15.55■□□□□ 0.08
COL18A1-206ENST00000459895 TNFAIP1Q13829 316 aa15.55■□□□□ 0.08
COL18A1-206ENST00000459895 SLC9C2Q5TAH2 1124 aa15.55■□□□□ 0.08
COL18A1-206ENST00000459895 PRAMEF18Q5VWM3 479 aa15.55■□□□□ 0.08
COL18A1-206ENST00000459895 SH3RF3Q8TEJ3 882 aaPredicted RBP15.55■□□□□ 0.08
COL18A1-206ENST00000459895 TMEM39BQ9GZU3 492 aa15.55■□□□□ 0.08
COL18A1-206ENST00000459895 DDX4Q9NQI0 724 aaKnown RBP15.55■□□□□ 0.08
COL18A1-206ENST00000459895 IGSF3O75054 1194 aa15.54■□□□□ 0.08
COL18A1-206ENST00000459895 WDHD1O75717 1129 aaPredicted RBP15.54■□□□□ 0.08
COL18A1-206ENST00000459895 CELF2O95319 508 aaKnown RBP15.54■□□□□ 0.08
COL18A1-206ENST00000459895 LDHCP07864 332 aa15.54■□□□□ 0.08
COL18A1-206ENST00000459895 HSPA6P17066 643 aa15.54■□□□□ 0.08
COL18A1-206ENST00000459895 APLP1P51693 650 aa15.54■□□□□ 0.08
COL18A1-206ENST00000459895 DYNLL1P63167 89 aaKnown RBP15.54■□□□□ 0.08
COL18A1-206ENST00000459895 RASA3Q14644 834 aa15.54■□□□□ 0.08
COL18A1-206ENST00000459895 FSD1Q9BTV5 496 aa15.54■□□□□ 0.08
COL18A1-206ENST00000459895 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.54■□□□□ 0.087e-8■■■■■ 28.3
COL18A1-206ENST00000459895 DEFB129Q9H1M3 183 aa15.54■□□□□ 0.08
COL18A1-206ENST00000459895 OSBPL3Q9H4L5 887 aa15.54■□□□□ 0.08
COL18A1-206ENST00000459895 USP40Q9NVE5 1235 aa15.54■□□□□ 0.08
COL18A1-206ENST00000459895 FAM198AQ9UFP1 575 aa15.54■□□□□ 0.08
COL18A1-206ENST00000459895 PPP2R3BQ9Y5P8 575 aa15.54■□□□□ 0.08
COL18A1-206ENST00000459895 LAMA4Q16363 1823 aa15.54■□□□□ 0.08
COL18A1-206ENST00000459895 ATRNL1Q5VV63 1379 aa15.53■□□□□ 0.08
COL18A1-206ENST00000459895 GSPT1P15170 499 aaKnown RBP15.53■□□□□ 0.08
COL18A1-206ENST00000459895 RGS3P49796 1198 aa15.53■□□□□ 0.08
COL18A1-206ENST00000459895 HTRA3P83110 453 aa15.53■□□□□ 0.08
COL18A1-206ENST00000459895 PICALMQ13492 652 aa15.53■□□□□ 0.08
COL18A1-206ENST00000459895 RIOK1Q9BRS2 568 aaKnown RBP15.53■□□□□ 0.08
COL18A1-206ENST00000459895 NOL10Q9BSC4 688 aaKnown RBP15.53■□□□□ 0.08
COL18A1-206ENST00000459895 FLT1P17948 1338 aa15.52■□□□□ 0.08
COL18A1-206ENST00000459895 TCP10Q12799 353 aa15.52■□□□□ 0.08
COL18A1-206ENST00000459895 FKBP1CQ5VVH2 108 aa15.52■□□□□ 0.08
COL18A1-206ENST00000459895 ERICH6BQ5W0A0 696 aa15.52■□□□□ 0.08
COL18A1-206ENST00000459895 CST9Q5W186 159 aa15.52■□□□□ 0.08
COL18A1-206ENST00000459895 TMED8Q6PL24 325 aaPredicted RBP15.52■□□□□ 0.08
COL18A1-206ENST00000459895 TEX11Q8IYF3 940 aa15.52■□□□□ 0.08
COL18A1-206ENST00000459895 LCORLQ8N3X6 602 aa15.52■□□□□ 0.08
COL18A1-206ENST00000459895 TEPSINQ96N21 525 aa15.52■□□□□ 0.08
COL18A1-206ENST00000459895 IDI2Q9BXS1 227 aa15.52■□□□□ 0.08
COL18A1-206ENST00000459895 PPP4R2Q9NY27 417 aa15.52■□□□□ 0.08
COL18A1-206ENST00000459895 MYH8P13535 1937 aa15.52■□□□□ 0.07
COL18A1-206ENST00000459895 MBD4O95243 580 aa15.51■□□□□ 0.07
COL18A1-206ENST00000459895 TNNI2P48788 182 aa15.51■□□□□ 0.07
COL18A1-206ENST00000459895 TTC22Q5TAA0 569 aa15.51■□□□□ 0.07
COL18A1-206ENST00000459895 FAM83AQ86UY5 434 aa15.51■□□□□ 0.07
COL18A1-206ENST00000459895 FZD1Q9UP38 647 aa15.51■□□□□ 0.07
COL18A1-206ENST00000459895 MAGEB6P1A0A0J9YX57 407 aa15.5■□□□□ 0.07
COL18A1-206ENST00000459895 TMEM88BA6NKF7 163 aa15.5■□□□□ 0.07
COL18A1-206ENST00000459895 BAG3O95817 575 aa15.5■□□□□ 0.07
COL18A1-206ENST00000459895 PPP4CP60510 307 aa15.5■□□□□ 0.07
COL18A1-206ENST00000459895 UBE3CQ15386 1083 aa15.5■□□□□ 0.07
COL18A1-206ENST00000459895 NBPF12Q5TAG4 269 aaPredicted RBP15.5■□□□□ 0.07
COL18A1-206ENST00000459895 ZSCAN25Q6NSZ9 544 aa15.5■□□□□ 0.07
COL18A1-206ENST00000459895 ZFPM1Q8IX07 1006 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms