RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 TRMT2AQ8IZ69 625 aaKnown RBP26.85■■□□□ 1.89
CPNE1-220ENST00000458038 ZNF341Q9BYN7 854 aa26.85■■□□□ 1.89
CPNE1-220ENST00000458038 PPIL2Q13356 520 aa26.84■■□□□ 1.89
CPNE1-220ENST00000458038 NBPF11Q86T75 865 aa26.84■■□□□ 1.89
CPNE1-220ENST00000458038 FAM43AQ8N2R8 423 aa26.84■■□□□ 1.89
CPNE1-220ENST00000458038 FAM151AQ8WW52 585 aa26.84■■□□□ 1.89
CPNE1-220ENST00000458038 AK9Q5TCS8 1911 aa26.84■■□□□ 1.89
CPNE1-220ENST00000458038 SEMA3EO15041 775 aa26.83■■□□□ 1.89
CPNE1-220ENST00000458038 ZBTB22O15209 634 aa26.83■■□□□ 1.89
CPNE1-220ENST00000458038 ATP2B3Q16720 1220 aa26.83■■□□□ 1.89
CPNE1-220ENST00000458038 TLR2O60603 784 aa26.82■■□□□ 1.88
CPNE1-220ENST00000458038 PPATQ06203 517 aa26.82■■□□□ 1.88
CPNE1-220ENST00000458038 KIF22Q14807 665 aa26.82■■□□□ 1.88
CPNE1-220ENST00000458038 ZKSCAN4Q969J2 545 aaPredicted RBP26.82■■□□□ 1.88
CPNE1-220ENST00000458038 API5Q9BZZ5 524 aaKnown RBP26.82■■□□□ 1.88
CPNE1-220ENST00000458038 IRF6O14896 467 aa26.81■■□□□ 1.88
CPNE1-220ENST00000458038 LDHBP07195 334 aaKnown RBP26.81■■□□□ 1.88
CPNE1-220ENST00000458038 IL15P40933 162 aaPredicted RBP26.81■■□□□ 1.88
CPNE1-220ENST00000458038 GCC1Q96CN9 775 aa26.81■■□□□ 1.88
CPNE1-220ENST00000458038 CDCA7LQ96GN5 454 aa26.81■■□□□ 1.88
CPNE1-220ENST00000458038 DENND2AQ9ULE3 1009 aa26.81■■□□□ 1.88
CPNE1-220ENST00000458038 SALL1Q9NSC2 1324 aa26.81■■□□□ 1.88
CPNE1-220ENST00000458038 POTEFA5A3E0 1075 aa26.8■■□□□ 1.88
CPNE1-220ENST00000458038 GNRH1P01148 92 aa26.8■■□□□ 1.88
CPNE1-220ENST00000458038 TMEM106CQ9BVX2 250 aa26.8■■□□□ 1.88
CPNE1-220ENST00000458038 SIL1Q9H173 461 aa26.8■■□□□ 1.88
CPNE1-220ENST00000458038 DAGLAQ9Y4D2 1042 aa26.8■■□□□ 1.88
CPNE1-220ENST00000458038 BTBD19C9JJ37 291 aa26.79■■□□□ 1.88
CPNE1-220ENST00000458038 CDC42EP5Q6NZY7 148 aa26.79■■□□□ 1.88
CPNE1-220ENST00000458038 ZGPATQ8N5A5 531 aaKnown RBP26.79■■□□□ 1.88
CPNE1-220ENST00000458038 ZNF112Q9UJU3 913 aa26.79■■□□□ 1.88
CPNE1-220ENST00000458038 SLC9C1Q4G0N8 1177 aa26.78■■□□□ 1.88
CPNE1-220ENST00000458038 MIGA2Q7L4E1 593 aa26.78■■□□□ 1.88
CPNE1-220ENST00000458038 NOB1Q9ULX3 412 aaKnown RBP26.78■■□□□ 1.88
CPNE1-220ENST00000458038 PRDX5P30044 214 aa26.77■■□□□ 1.88
CPNE1-220ENST00000458038 PRMT2P55345 433 aa26.77■■□□□ 1.88
CPNE1-220ENST00000458038 CAP1Q01518 475 aa26.77■■□□□ 1.88
CPNE1-220ENST00000458038 ZNF333Q96JL9 665 aa26.77■■□□□ 1.88
CPNE1-220ENST00000458038 COPRSQ9NQ92 184 aa26.77■■□□□ 1.88
CPNE1-220ENST00000458038 BRCA2P51587 3418 aa26.76■■□□□ 1.87
CPNE1-220ENST00000458038 LACTBP83111 547 aaPredicted RBP26.76■■□□□ 1.87
CPNE1-220ENST00000458038 DIXDC1Q155Q3 683 aa26.76■■□□□ 1.87
CPNE1-220ENST00000458038 INPP5BP32019 993 aa26.75■■□□□ 1.87
CPNE1-220ENST00000458038 TCP10Q12799 353 aa26.75■■□□□ 1.87
CPNE1-220ENST00000458038 ANKRD23Q86SG2 305 aa26.75■■□□□ 1.87
CPNE1-220ENST00000458038 USP40Q9NVE5 1235 aa26.75■■□□□ 1.87
CPNE1-220ENST00000458038 KCNH4Q9UQ05 1017 aa26.75■■□□□ 1.87
CPNE1-220ENST00000458038 LRRFIP2Q9Y608 721 aaKnown RBP26.75■■□□□ 1.87
CPNE1-220ENST00000458038 PTCH2Q9Y6C5 1203 aa26.75■■□□□ 1.87
CPNE1-220ENST00000458038 NOL9Q5SY16 702 aaKnown RBP26.74■■□□□ 1.87
CPNE1-220ENST00000458038 SLF2Q8IX21 1173 aa26.74■■□□□ 1.87
CPNE1-220ENST00000458038 ARHGAP45Q92619 1136 aa26.74■■□□□ 1.87
CPNE1-220ENST00000458038 MYH2Q9UKX2 1941 aa26.74■■□□□ 1.87
CPNE1-220ENST00000458038 PDS5AQ29RF7 1337 aaKnown RBP26.73■■□□□ 1.87
CPNE1-220ENST00000458038 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.73■■□□□ 1.87
CPNE1-220ENST00000458038 FAM198AQ9UFP1 575 aa26.73■■□□□ 1.87
CPNE1-220ENST00000458038 GNAI3P08754 354 aa26.72■■□□□ 1.87
CPNE1-220ENST00000458038 PHKA1P46020 1223 aa26.72■■□□□ 1.87
CPNE1-220ENST00000458038 NFIAQ12857 509 aa26.72■■□□□ 1.87
CPNE1-220ENST00000458038 AKAP2Q9Y2D5 859 aa26.72■■□□□ 1.87
CPNE1-220ENST00000458038 ENTPD3O75355 529 aa26.71■■□□□ 1.87
CPNE1-220ENST00000458038 EN2P19622 333 aaPredicted RBP26.71■■□□□ 1.87
CPNE1-220ENST00000458038 SPTY2D1Q68D10 685 aaPredicted RBP26.71■■□□□ 1.87
CPNE1-220ENST00000458038 CCDC102BQ68D86 513 aa26.71■■□□□ 1.87
CPNE1-220ENST00000458038 C17orf99Q6UX52 265 aa26.71■■□□□ 1.87
CPNE1-220ENST00000458038 IDI2Q9BXS1 227 aa26.71■■□□□ 1.87
CPNE1-220ENST00000458038 PA2G4Q9UQ80 394 aaKnown RBP26.71■■□□□ 1.87
CPNE1-220ENST00000458038 CXCL11O14625 94 aa26.7■■□□□ 1.86
CPNE1-220ENST00000458038 HOXD10P28358 340 aa26.7■■□□□ 1.86
CPNE1-220ENST00000458038 SLC4A8Q2Y0W8 1093 aa26.7■■□□□ 1.86
CPNE1-220ENST00000458038 FAM163AQ96GL9 167 aaPredicted RBP26.7■■□□□ 1.86
CPNE1-220ENST00000458038 PDHXO00330 501 aa26.69■■□□□ 1.86
CPNE1-220ENST00000458038 RARSP54136 660 aaKnown RBP26.69■■□□□ 1.86
CPNE1-220ENST00000458038 MEIS3Q99687 375 aa26.69■■□□□ 1.86
CPNE1-220ENST00000458038 GAKO14976 1311 aa26.68■■□□□ 1.86
CPNE1-220ENST00000458038 DZIP1Q86YF9 867 aaKnown RBP26.68■■□□□ 1.86
CPNE1-220ENST00000458038 ARHGAP39Q9C0H5 1083 aa26.68■■□□□ 1.86
CPNE1-220ENST00000458038 MTX1Q13505 466 aa26.67■■□□□ 1.86
CPNE1-220ENST00000458038 MVPQ14764 893 aaKnown RBP26.67■■□□□ 1.86
CPNE1-220ENST00000458038 ADORA1P30542 326 aa26.66■■□□□ 1.86
CPNE1-220ENST00000458038 RGS3P49796 1198 aa26.66■■□□□ 1.86
CPNE1-220ENST00000458038 TIMM10P62072 90 aa26.66■■□□□ 1.86
CPNE1-220ENST00000458038 MAP3K10Q02779 954 aa26.66■■□□□ 1.86
CPNE1-220ENST00000458038 DOCK2Q92608 1830 aa26.65■■□□□ 1.86
CPNE1-220ENST00000458038 PHF20L1A8MW92 1017 aa26.65■■□□□ 1.86
CPNE1-220ENST00000458038 CCER2I3L3R5 266 aa26.65■■□□□ 1.86
CPNE1-220ENST00000458038 IPO8O15397 1037 aaKnown RBP26.65■■□□□ 1.86
CPNE1-220ENST00000458038 SRGAP3O43295 1099 aa26.65■■□□□ 1.86
CPNE1-220ENST00000458038 RASGRF1Q13972 1273 aa26.65■■□□□ 1.86
CPNE1-220ENST00000458038 FASTKD5Q7L8L6 764 aaKnown RBP26.65■■□□□ 1.86
CPNE1-220ENST00000458038 PARK7Q99497 189 aaKnown RBP26.65■■□□□ 1.86
CPNE1-220ENST00000458038 PICK1Q9NRD5 415 aa26.65■■□□□ 1.86
CPNE1-220ENST00000458038 ABCF2Q9UG63 623 aa26.65■■□□□ 1.86
CPNE1-220ENST00000458038 SRRDQ9UH36 339 aa26.65■■□□□ 1.86
CPNE1-220ENST00000458038 CPA4Q9UI42 421 aa26.65■■□□□ 1.86
CPNE1-220ENST00000458038 CEP290O15078 2479 aa26.65■■□□□ 1.86
CPNE1-220ENST00000458038 ADGRA2Q96PE1 1338 aa26.65■■□□□ 1.86
CPNE1-220ENST00000458038 A0A1B0GUL7 405 aa26.64■■□□□ 1.86
CPNE1-220ENST00000458038 PSMC4P43686 418 aa26.64■■□□□ 1.86
CPNE1-220ENST00000458038 MOGSQ13724 837 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms