RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 HNRNPLLQ8WVV9 542 aaKnown RBP15.73■□□□□ 0.11
PTPRE-204ENST00000455661 FAM237AA0A1B0GTK4 181 aa15.72■□□□□ 0.11
PTPRE-204ENST00000455661 IFIT1P09914 478 aaKnown RBP15.72■□□□□ 0.11
PTPRE-204ENST00000455661 NOM1Q5C9Z4 860 aaKnown RBP15.72■□□□□ 0.11
PTPRE-204ENST00000455661 SRGAP1Q7Z6B7 1085 aa15.72■□□□□ 0.11
PTPRE-204ENST00000455661 SRLQ86TD4 932 aa15.72■□□□□ 0.11
PTPRE-204ENST00000455661 PLCD3Q8N3E9 789 aa15.72■□□□□ 0.11
PTPRE-204ENST00000455661 GOLGA6L1Q8N7Z2 621 aa15.72■□□□□ 0.11
PTPRE-204ENST00000455661 CEP112Q8N8E3 955 aa15.72■□□□□ 0.11
PTPRE-204ENST00000455661 TC2NQ8N9U0 490 aa15.72■□□□□ 0.11
PTPRE-204ENST00000455661 GJB4Q9NTQ9 266 aa15.72■□□□□ 0.11
PTPRE-204ENST00000455661 DACH1Q9UI36 760 aa15.72■□□□□ 0.11
PTPRE-204ENST00000455661 A0A087WZG4 1122 aa15.72■□□□□ 0.11
PTPRE-204ENST00000455661 H3BQF6 201 aa15.72■□□□□ 0.11
PTPRE-204ENST00000455661 CCDC175P0C221 793 aa15.72■□□□□ 0.11
PTPRE-204ENST00000455661 ADKP55263 362 aaKnown RBP15.72■□□□□ 0.11
PTPRE-204ENST00000455661 RESP18Q5W5W9 173 aa15.72■□□□□ 0.11
PTPRE-204ENST00000455661 RALYLQ86SE5 291 aaKnown RBP15.72■□□□□ 0.11
PTPRE-204ENST00000455661 GPR108Q9NPR9 543 aa15.72■□□□□ 0.11
PTPRE-204ENST00000455661 INTS13Q9NVM9 706 aa15.72■□□□□ 0.11
PTPRE-204ENST00000455661 HPS5Q9UPZ3 1129 aa15.72■□□□□ 0.11
PTPRE-204ENST00000455661 RGPD2P0DJD1 1756 aa15.71■□□□□ 0.11
PTPRE-204ENST00000455661 KARSQ15046 597 aaKnown RBP15.71■□□□□ 0.11
PTPRE-204ENST00000455661 ZNF790Q6PG37 636 aa15.71■□□□□ 0.11
PTPRE-204ENST00000455661 NCOA7Q8NI08 942 aa15.71■□□□□ 0.11
PTPRE-204ENST00000455661 VPS18Q9P253 973 aa15.71■□□□□ 0.11
PTPRE-204ENST00000455661 PHF8Q9UPP1 1060 aa15.71■□□□□ 0.11
PTPRE-204ENST00000455661 RRP15Q9Y3B9 282 aaKnown RBP15.71■□□□□ 0.11
PTPRE-204ENST00000455661 PCDHA5Q9Y5H7 936 aa15.71■□□□□ 0.11
PTPRE-204ENST00000455661 NFAT5O94916 1531 aa15.71■□□□□ 0.11
PTPRE-204ENST00000455661 M0R2C6 588 aa15.71■□□□□ 0.1
PTPRE-204ENST00000455661 CUTAO60888 179 aa15.71■□□□□ 0.1
PTPRE-204ENST00000455661 TUBB2AQ13885 445 aa15.71■□□□□ 0.1
PTPRE-204ENST00000455661 CTR9Q6PD62 1173 aa15.71■□□□□ 0.1
PTPRE-204ENST00000455661 METTL16Q86W50 562 aaKnown RBP15.71■□□□□ 0.1
PTPRE-204ENST00000455661 TUBB2BQ9BVA1 445 aa15.71■□□□□ 0.1
PTPRE-204ENST00000455661 HAND2P61296 217 aa15.7■□□□□ 0.1
PTPRE-204ENST00000455661 TIMM10P62072 90 aa15.7■□□□□ 0.1
PTPRE-204ENST00000455661 MCM6Q14566 821 aa15.7■□□□□ 0.1
PTPRE-204ENST00000455661 LONRF3Q496Y0 759 aa15.7■□□□□ 0.1
PTPRE-204ENST00000455661 LMBR1LQ6UX01 489 aa15.7■□□□□ 0.1
PTPRE-204ENST00000455661 VPS37DQ86XT2 251 aa15.7■□□□□ 0.1
PTPRE-204ENST00000455661 ALG1Q9BT22 464 aa15.7■□□□□ 0.1
PTPRE-204ENST00000455661 LCMT1Q9UIC8 334 aa15.7■□□□□ 0.1
PTPRE-204ENST00000455661 KCNH3Q9ULD8 1083 aa15.7■□□□□ 0.1
PTPRE-204ENST00000455661 TRIM66O15016 1216 aa15.69■□□□□ 0.1
PTPRE-204ENST00000455661 CDKL5O76039 1030 aa15.69■□□□□ 0.1
PTPRE-204ENST00000455661 RAB11FIP4Q86YS3 637 aa15.69■□□□□ 0.1
PTPRE-204ENST00000455661 MB21D2Q8IYB1 491 aaPredicted RBP15.69■□□□□ 0.1
PTPRE-204ENST00000455661 ELOA2Q8IYF1 753 aaPredicted RBP15.69■□□□□ 0.1
PTPRE-204ENST00000455661 MSL3Q8N5Y2 521 aaKnown RBP15.69■□□□□ 0.1
PTPRE-204ENST00000455661 DESI2Q9BSY9 194 aa15.69■□□□□ 0.1
PTPRE-204ENST00000455661 ZSWIM4Q9H7M6 989 aa15.69■□□□□ 0.1
PTPRE-204ENST00000455661 PDE11AQ9HCR9 933 aa15.69■□□□□ 0.1
PTPRE-204ENST00000455661 KIF5CO60282 957 aa15.69■□□□□ 0.1
PTPRE-204ENST00000455661 SLC39A6Q13433 755 aa15.69■□□□□ 0.1
PTPRE-204ENST00000455661 PTPAQ15257 358 aa15.69■□□□□ 0.1
PTPRE-204ENST00000455661 HSP90AA4PQ58FG1 418 aa15.69■□□□□ 0.1
PTPRE-204ENST00000455661 CPLX2Q6PUV4 134 aaKnown RBP15.69■□□□□ 0.1
PTPRE-204ENST00000455661 MLKLQ8NB16 471 aa15.69■□□□□ 0.1
PTPRE-204ENST00000455661 RAI14Q9P0K7 980 aa15.69■□□□□ 0.1
PTPRE-204ENST00000455661 NFE2L3Q9Y4A8 694 aa15.69■□□□□ 0.1
PTPRE-204ENST00000455661 AKR1B15C9JRZ8 316 aaPredicted RBP15.68■□□□□ 0.1
PTPRE-204ENST00000455661 USP5P45974 858 aa15.68■□□□□ 0.1
PTPRE-204ENST00000455661 PDE4BQ07343 736 aa15.68■□□□□ 0.1
PTPRE-204ENST00000455661 WASHC4Q2M389 1173 aa15.68■□□□□ 0.1
PTPRE-204ENST00000455661 BEND6Q5SZJ8 279 aaPredicted RBP15.68■□□□□ 0.1
PTPRE-204ENST00000455661 ENOX1Q8TC92 643 aaKnown RBP15.68■□□□□ 0.1
PTPRE-204ENST00000455661 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.68■□□□□ 0.1
PTPRE-204ENST00000455661 PUF60Q9UHX1 559 aaKnown RBP15.68■□□□□ 0.1
PTPRE-204ENST00000455661 CDC23Q9UJX2 597 aa15.68■□□□□ 0.1
PTPRE-204ENST00000455661 WDR19Q8NEZ3 1342 aa15.68■□□□□ 0.1
PTPRE-204ENST00000455661 ATP5J2-PTCD1G3V325 749 aa15.68■□□□□ 0.1
PTPRE-204ENST00000455661 PTCD1O75127 700 aaKnown RBP15.68■□□□□ 0.1
PTPRE-204ENST00000455661 IL15P40933 162 aaPredicted RBP15.68■□□□□ 0.1
PTPRE-204ENST00000455661 TRIM29Q14134 588 aa15.68■□□□□ 0.1
PTPRE-204ENST00000455661 KRT40Q6A162 431 aa15.68■□□□□ 0.1
PTPRE-204ENST00000455661 NUTM2AQ8IVF1 878 aaPredicted RBP15.68■□□□□ 0.1
PTPRE-204ENST00000455661 FOXP4Q8IVH2 680 aaPredicted RBP15.68■□□□□ 0.1
PTPRE-204ENST00000455661 OSBP2Q969R2 916 aa15.68■□□□□ 0.1
PTPRE-204ENST00000455661 CLIC6Q96NY7 704 aa15.68■□□□□ 0.1
PTPRE-204ENST00000455661 PANX2Q96RD6 677 aa15.68■□□□□ 0.1
PTPRE-204ENST00000455661 NAA15Q9BXJ9 866 aaKnown RBP15.68■□□□□ 0.1
PTPRE-204ENST00000455661 GBP3Q9H0R5 595 aa15.68■□□□□ 0.1
PTPRE-204ENST00000455661 RAB21Q9UL25 225 aa15.68■□□□□ 0.1
PTPRE-204ENST00000455661 SIPA1L3O60292 1781 aaPredicted RBP15.67■□□□□ 0.1
PTPRE-204ENST00000455661 HSP90B2PQ58FF3 399 aa15.67■□□□□ 0.1
PTPRE-204ENST00000455661 ATG9AQ7Z3C6 839 aa15.67■□□□□ 0.1
PTPRE-204ENST00000455661 MAP3K14Q99558 947 aa15.67■□□□□ 0.1
PTPRE-204ENST00000455661 ANKZF1Q9H8Y5 726 aa15.67■□□□□ 0.1
PTPRE-204ENST00000455661 MRPL44Q9H9J2 332 aaKnown RBP15.67■□□□□ 0.1
PTPRE-204ENST00000455661 LZTFL1Q9NQ48 299 aa15.67■□□□□ 0.1
PTPRE-204ENST00000455661 ZNF213O14771 459 aa15.67■□□□□ 0.1
PTPRE-204ENST00000455661 FGAP02671 866 aa15.67■□□□□ 0.1
PTPRE-204ENST00000455661 ZFYP08048 801 aaPredicted RBP15.67■□□□□ 0.1
PTPRE-204ENST00000455661 ZNF18P17022 549 aa15.67■□□□□ 0.1
PTPRE-204ENST00000455661 CDC27P30260 824 aa15.67■□□□□ 0.1
PTPRE-204ENST00000455661 TTC39AQ5SRH9 613 aa15.67■□□□□ 0.1
PTPRE-204ENST00000455661 MSANTD4Q8NCY6 345 aa15.67■□□□□ 0.1
PTPRE-204ENST00000455661 ACBD3Q9H3P7 528 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms