RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 FAM9BQ8IZU0 186 aa23.44■■□□□ 1.34
MSH6-206ENST00000455383 ZNF341Q9BYN7 854 aa23.44■■□□□ 1.34
MSH6-206ENST00000455383 EYA2O00167 538 aa23.43■■□□□ 1.34
MSH6-206ENST00000455383 C17orf99Q6UX52 265 aa23.43■■□□□ 1.34
MSH6-206ENST00000455383 WDR66Q8TBY9 1149 aa23.43■■□□□ 1.34
MSH6-206ENST00000455383 ZNF112Q9UJU3 913 aa23.43■■□□□ 1.34
MSH6-206ENST00000455383 ZSWIM8A7E2V4 1837 aa23.43■■□□□ 1.34
MSH6-206ENST00000455383 PRMT2P55345 433 aa23.42■■□□□ 1.34
MSH6-206ENST00000455383 KIF22Q14807 665 aa23.42■■□□□ 1.34
MSH6-206ENST00000455383 FAM151AQ8WW52 585 aa23.42■■□□□ 1.34
MSH6-206ENST00000455383 LPIN2Q92539 896 aa23.42■■□□□ 1.34
MSH6-206ENST00000455383 INPP5BP32019 993 aa23.41■■□□□ 1.34
MSH6-206ENST00000455383 SLC4A8Q2Y0W8 1093 aa23.41■■□□□ 1.34
MSH6-206ENST00000455383 MIGA2Q7L4E1 593 aa23.41■■□□□ 1.34
MSH6-206ENST00000455383 SSH1Q8WYL5 1049 aa23.41■■□□□ 1.34
MSH6-206ENST00000455383 KCNH4Q9UQ05 1017 aa23.41■■□□□ 1.34
MSH6-206ENST00000455383 ADGRA2Q96PE1 1338 aa23.4■■□□□ 1.34
MSH6-206ENST00000455383 SLC5A1P13866 664 aa23.4■■□□□ 1.34
MSH6-206ENST00000455383 ATG9AQ7Z3C6 839 aa23.4■■□□□ 1.34
MSH6-206ENST00000455383 ANKRD23Q86SG2 305 aa23.4■■□□□ 1.34
MSH6-206ENST00000455383 SH3TC2Q8TF17 1288 aa23.4■■□□□ 1.34
MSH6-206ENST00000455383 DAGLAQ9Y4D2 1042 aa23.4■■□□□ 1.34
MSH6-206ENST00000455383 CTGFP29279 349 aa23.39■■□□□ 1.33
MSH6-206ENST00000455383 MOGSQ13724 837 aa23.39■■□□□ 1.33
MSH6-206ENST00000455383 CDC42EP5Q6NZY7 148 aa23.39■■□□□ 1.33
MSH6-206ENST00000455383 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.39■■□□□ 1.33
MSH6-206ENST00000455383 NOL9Q5SY16 702 aaKnown RBP23.38■■□□□ 1.33
MSH6-206ENST00000455383 ZBTB22O15209 634 aa23.37■■□□□ 1.33
MSH6-206ENST00000455383 FXR1P51114 621 aaKnown RBP eCLIP23.37■■□□□ 1.33
MSH6-206ENST00000455383 NFIAQ12857 509 aa23.37■■□□□ 1.33
MSH6-206ENST00000455383 FBXO3Q9UK99 471 aa23.37■■□□□ 1.33
MSH6-206ENST00000455383 SALL1Q9NSC2 1324 aa23.36■■□□□ 1.33
MSH6-206ENST00000455383 MYH13Q9UKX3 1938 aa23.36■■□□□ 1.33
MSH6-206ENST00000455383 E9PSI1 815 aa23.36■■□□□ 1.33
MSH6-206ENST00000455383 PDHXO00330 501 aa23.36■■□□□ 1.33
MSH6-206ENST00000455383 PRDX5P30044 214 aa23.36■■□□□ 1.33
MSH6-206ENST00000455383 DIXDC1Q155Q3 683 aa23.36■■□□□ 1.33
MSH6-206ENST00000455383 FAM198AQ9UFP1 575 aa23.36■■□□□ 1.33
MSH6-206ENST00000455383 SRRDQ9UH36 339 aa23.36■■□□□ 1.33
MSH6-206ENST00000455383 CPA4Q9UI42 421 aa23.36■■□□□ 1.33
MSH6-206ENST00000455383 ZNF316A6NFI3 1004 aaPredicted RBP23.35■■□□□ 1.33
MSH6-206ENST00000455383 MYCP01106 439 aaPredicted RBP23.35■■□□□ 1.33
MSH6-206ENST00000455383 TCP10Q12799 353 aa23.35■■□□□ 1.33
MSH6-206ENST00000455383 TRIM47Q96LD4 638 aa23.35■■□□□ 1.33
MSH6-206ENST00000455383 CIAO1O76071 339 aa23.34■■□□□ 1.33
MSH6-206ENST00000455383 PSMC4P43686 418 aa23.34■■□□□ 1.33
MSH6-206ENST00000455383 COLQQ9Y215 455 aaPredicted RBP23.34■■□□□ 1.33
MSH6-206ENST00000455383 ATRNL1Q5VV63 1379 aa23.34■■□□□ 1.33
MSH6-206ENST00000455383 OSBPP22059 807 aa23.33■■□□□ 1.33
MSH6-206ENST00000455383 SLFN5Q08AF3 891 aa23.33■■□□□ 1.33
MSH6-206ENST00000455383 ALDH1L2Q3SY69 923 aa23.33■■□□□ 1.33
MSH6-206ENST00000455383 SHISA4Q96DD7 197 aa23.33■■□□□ 1.33
MSH6-206ENST00000455383 CXCL11O14625 94 aa23.32■■□□□ 1.32
MSH6-206ENST00000455383 SEMA3EO15041 775 aa23.32■■□□□ 1.32
MSH6-206ENST00000455383 LDHBP07195 334 aaKnown RBP23.32■■□□□ 1.32
MSH6-206ENST00000455383 HOXD10P28358 340 aa23.32■■□□□ 1.32
MSH6-206ENST00000455383 ZEB1P37275 1124 aaPredicted RBP23.32■■□□□ 1.32
MSH6-206ENST00000455383 MTFR1Q15390 333 aa23.32■■□□□ 1.32
MSH6-206ENST00000455383 ATP2B3Q16720 1220 aa23.32■■□□□ 1.32
MSH6-206ENST00000455383 GPAT2Q6NUI2 795 aa23.32■■□□□ 1.32
MSH6-206ENST00000455383 ZFPM1Q8IX07 1006 aa23.32■■□□□ 1.32
MSH6-206ENST00000455383 USP40Q9NVE5 1235 aa23.32■■□□□ 1.32
MSH6-206ENST00000455383 PHF20L1A8MW92 1017 aa23.31■■□□□ 1.32
MSH6-206ENST00000455383 BCRP11274 1271 aa23.31■■□□□ 1.32
MSH6-206ENST00000455383 IDI2Q9BXS1 227 aa23.31■■□□□ 1.32
MSH6-206ENST00000455383 GNL3LQ9NVN8 582 aaKnown RBP23.31■■□□□ 1.32
MSH6-206ENST00000455383 CEP126Q9P2H0 1117 aa23.31■■□□□ 1.32
MSH6-206ENST00000455383 DENND2AQ9ULE3 1009 aa23.31■■□□□ 1.32
MSH6-206ENST00000455383 H0YGN5 161 aa23.3■■□□□ 1.32
MSH6-206ENST00000455383 MAP3K10Q02779 954 aa23.3■■□□□ 1.32
MSH6-206ENST00000455383 GAKO14976 1311 aa23.3■■□□□ 1.32
MSH6-206ENST00000455383 RFX7Q2KHR2 1363 aa23.29■■□□□ 1.32
MSH6-206ENST00000455383 ENTPD3O75355 529 aa23.29■■□□□ 1.32
MSH6-206ENST00000455383 FMNL1O95466 1100 aaPredicted RBP23.29■■□□□ 1.32
MSH6-206ENST00000455383 GRK4P32298 578 aa23.29■■□□□ 1.32
MSH6-206ENST00000455383 PHKA1P46020 1223 aa23.29■■□□□ 1.32
MSH6-206ENST00000455383 UBE2Q1Q7Z7E8 422 aa23.29■■□□□ 1.32
MSH6-206ENST00000455383 PARK7Q99497 189 aaKnown RBP23.29■■□□□ 1.32
MSH6-206ENST00000455383 SIL1Q9H173 461 aa23.29■■□□□ 1.32
MSH6-206ENST00000455383 MYPNQ86TC9 1320 aa23.29■■□□□ 1.32
MSH6-206ENST00000455383 ECM2O94769 699 aaPredicted RBP23.28■■□□□ 1.32
MSH6-206ENST00000455383 UBTFL1P0CB47 393 aaPredicted RBP23.28■■□□□ 1.32
MSH6-206ENST00000455383 IL15P40933 162 aaPredicted RBP23.28■■□□□ 1.32
MSH6-206ENST00000455383 SCYL3Q8IZE3 742 aa23.28■■□□□ 1.32
MSH6-206ENST00000455383 RAET1EQ8TD07 263 aa23.28■■□□□ 1.32
MSH6-206ENST00000455383 AK9Q5TCS8 1911 aa23.27■■□□□ 1.32
MSH6-206ENST00000455383 GJB1P08034 283 aa23.27■■□□□ 1.32
MSH6-206ENST00000455383 GJA8P48165 433 aa23.27■■□□□ 1.32
MSH6-206ENST00000455383 RGS3P49796 1198 aa23.27■■□□□ 1.32
MSH6-206ENST00000455383 SH3BP5LQ7L8J4 393 aa23.27■■□□□ 1.32
MSH6-206ENST00000455383 NKX2-3Q8TAU0 364 aa23.27■■□□□ 1.32
MSH6-206ENST00000455383 A0A0G2JLL6 359 aaPredicted RBP23.26■■□□□ 1.31
MSH6-206ENST00000455383 CYP2C8P10632 490 aa23.26■■□□□ 1.31
MSH6-206ENST00000455383 FCGRTP55899 365 aa23.26■■□□□ 1.31
MSH6-206ENST00000455383 PRRT2Q7Z6L0 340 aaPredicted RBP23.26■■□□□ 1.31
MSH6-206ENST00000455383 TRMT2AQ8IZ69 625 aaKnown RBP23.26■■□□□ 1.31
MSH6-206ENST00000455383 FAM163AQ96GL9 167 aaPredicted RBP23.26■■□□□ 1.31
MSH6-206ENST00000455383 COPRSQ9NQ92 184 aa23.26■■□□□ 1.31
MSH6-206ENST00000455383 SMC4Q9NTJ3 1288 aa23.26■■□□□ 1.31
MSH6-206ENST00000455383 PDS5AQ29RF7 1337 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms