RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 PTPRNQ16849 979 aa7.41□□□□□ -1.22
SBDSP1-204ENST00000453858 TPTE2Q6XPS3 522 aa7.41□□□□□ -1.22
SBDSP1-204ENST00000453858 ADAMTS19Q8TE59 1207 aa7.41□□□□□ -1.22
SBDSP1-204ENST00000453858 TSC1Q92574 1164 aa7.41□□□□□ -1.22
SBDSP1-204ENST00000453858 SLC6A16Q9GZN6 736 aa7.41□□□□□ -1.22
SBDSP1-204ENST00000453858 C11orf16Q9NQ32 467 aa7.41□□□□□ -1.22
SBDSP1-204ENST00000453858 IGSF5Q9NSI5 407 aa7.41□□□□□ -1.22
SBDSP1-204ENST00000453858 KIF7Q2M1P5 1343 aa7.41□□□□□ -1.22
SBDSP1-204ENST00000453858 SCN7AQ01118 1682 aa7.41□□□□□ -1.22
SBDSP1-204ENST00000453858 DMXL1Q9Y485 3027 aa7.41□□□□□ -1.22
SBDSP1-204ENST00000453858 MANSC4A6NHS7 340 aaPredicted RBP7.4□□□□□ -1.22
SBDSP1-204ENST00000453858 NPHP1O15259 732 aa7.4□□□□□ -1.22
SBDSP1-204ENST00000453858 DXOO77932 396 aaKnown RBP7.4□□□□□ -1.22
SBDSP1-204ENST00000453858 GGCXP38435 758 aa7.4□□□□□ -1.22
SBDSP1-204ENST00000453858 IL6STP40189 918 aaPredicted RBP7.4□□□□□ -1.22
SBDSP1-204ENST00000453858 SLC39A6Q13433 755 aa7.4□□□□□ -1.22
SBDSP1-204ENST00000453858 CLEC4GQ6UXB4 293 aa7.4□□□□□ -1.22
SBDSP1-204ENST00000453858 FAM160A2Q8N612 972 aaPredicted RBP7.4□□□□□ -1.22
SBDSP1-204ENST00000453858 MYLIPQ8WY64 445 aa7.4□□□□□ -1.22
SBDSP1-204ENST00000453858 ASB2Q96Q27 587 aa7.4□□□□□ -1.22
SBDSP1-204ENST00000453858 TTYH1Q9H313 450 aaPredicted RBP7.4□□□□□ -1.22
SBDSP1-204ENST00000453858 EPHX3Q9H6B9 360 aa7.4□□□□□ -1.22
SBDSP1-204ENST00000453858 ZMYND8Q9ULU4 1186 aaPredicted RBP7.4□□□□□ -1.22
SBDSP1-204ENST00000453858 EMILIN1Q9Y6C2 1016 aa7.4□□□□□ -1.22
SBDSP1-204ENST00000453858 WASHC2AQ641Q2 1341 aa7.4□□□□□ -1.22
SBDSP1-204ENST00000453858 TPRP12270 2363 aaKnown RBP7.4□□□□□ -1.23
SBDSP1-204ENST00000453858 FASNP49327 2511 aaKnown RBP7.39□□□□□ -1.23
SBDSP1-204ENST00000453858 PSMD14O00487 310 aa7.39□□□□□ -1.23
SBDSP1-204ENST00000453858 CCL5P13501 91 aa7.39□□□□□ -1.23
SBDSP1-204ENST00000453858 ANGEL2Q5VTE6 544 aaKnown RBP7.39□□□□□ -1.23
SBDSP1-204ENST00000453858 PRAMEF18Q5VWM3 479 aa7.39□□□□□ -1.23
SBDSP1-204ENST00000453858 WWC1Q8IX03 1113 aa7.39□□□□□ -1.23
SBDSP1-204ENST00000453858 U2AF1L4Q8WU68 220 aaKnown RBP7.39□□□□□ -1.23
SBDSP1-204ENST00000453858 ATXN2LQ8WWM7 1075 aaKnown RBP7.39□□□□□ -1.23
SBDSP1-204ENST00000453858 ZNF516Q92618 1163 aa7.39□□□□□ -1.23
SBDSP1-204ENST00000453858 CRAMP1Q96RY5 1269 aa7.39□□□□□ -1.23
SBDSP1-204ENST00000453858 UHRF1Q96T88 793 aaPredicted RBP7.39□□□□□ -1.23
SBDSP1-204ENST00000453858 UBE2OQ9C0C9 1292 aaKnown RBP7.39□□□□□ -1.23
SBDSP1-204ENST00000453858 ZMYND15Q9H091 742 aa7.39□□□□□ -1.23
SBDSP1-204ENST00000453858 GGNBP2Q9H3C7 697 aa7.39□□□□□ -1.23
SBDSP1-204ENST00000453858 KCNQ5Q9NR82 932 aa7.39□□□□□ -1.23
SBDSP1-204ENST00000453858 SNRKQ9NRH2 765 aa7.39□□□□□ -1.23
SBDSP1-204ENST00000453858 V9GY48 417 aaPredicted RBP7.39□□□□□ -1.23
SBDSP1-204ENST00000453858 COL3A1P02461 1466 aaPredicted RBP7.38□□□□□ -1.23
SBDSP1-204ENST00000453858 A6NJR5 290 aa7.38□□□□□ -1.23
SBDSP1-204ENST00000453858 SGPL1O95470 568 aa7.38□□□□□ -1.23
SBDSP1-204ENST00000453858 STARD3NLO95772 234 aa7.38□□□□□ -1.23
SBDSP1-204ENST00000453858 RPS12P25398 132 aaKnown RBP7.38□□□□□ -1.23
SBDSP1-204ENST00000453858 SCARF1Q14162 830 aa7.38□□□□□ -1.23
SBDSP1-204ENST00000453858 KIF4BQ2VIQ3 1234 aa7.38□□□□□ -1.23
SBDSP1-204ENST00000453858 ZNF697Q5TEC3 545 aa7.38□□□□□ -1.23
SBDSP1-204ENST00000453858 ZNF530Q6P9A1 599 aaPredicted RBP7.38□□□□□ -1.23
SBDSP1-204ENST00000453858 PPARGC1BQ86YN6 1023 aaKnown RBP7.38□□□□□ -1.23
SBDSP1-204ENST00000453858 PUS7Q96PZ0 661 aaKnown RBP7.38□□□□□ -1.23
SBDSP1-204ENST00000453858 ARHGAP39Q9C0H5 1083 aa7.38□□□□□ -1.23
SBDSP1-204ENST00000453858 SCAF8Q9UPN6 1271 aaKnown RBP7.38□□□□□ -1.23
SBDSP1-204ENST00000453858 ATP6V0A2Q9Y487 856 aa7.38□□□□□ -1.23
SBDSP1-204ENST00000453858 FLNBO75369 2602 aaKnown RBP7.38□□□□□ -1.23
SBDSP1-204ENST00000453858 MAST4O15021 2626 aa7.37□□□□□ -1.23
SBDSP1-204ENST00000453858 FRYLO94915 3013 aa7.37□□□□□ -1.23
SBDSP1-204ENST00000453858 PTPRZ1P23471 2315 aaPredicted RBP7.37□□□□□ -1.23
SBDSP1-204ENST00000453858 GPR37L1O60883 481 aa7.37□□□□□ -1.23
SBDSP1-204ENST00000453858 ZNF280AP59817 542 aaPredicted RBP7.37□□□□□ -1.23
SBDSP1-204ENST00000453858 ARHGEF6Q15052 776 aa7.37□□□□□ -1.23
SBDSP1-204ENST00000453858 PLEKHO1Q53GL0 409 aaPredicted RBP7.37□□□□□ -1.23
SBDSP1-204ENST00000453858 PPP1R18Q6NYC8 613 aa7.37□□□□□ -1.23
SBDSP1-204ENST00000453858 MTMR14Q8NCE2 650 aa7.37□□□□□ -1.23
SBDSP1-204ENST00000453858 ARMC2Q8NEN0 867 aa7.37□□□□□ -1.23
SBDSP1-204ENST00000453858 SLC52A2Q9HAB3 445 aa7.37□□□□□ -1.23
SBDSP1-204ENST00000453858 LGR6Q9HBX8 967 aa7.37□□□□□ -1.23
SBDSP1-204ENST00000453858 EVA1BQ9NVM1 165 aa7.37□□□□□ -1.23
SBDSP1-204ENST00000453858 ASPMQ8IZT6 3477 aa7.36□□□□□ -1.23
SBDSP1-204ENST00000453858 RIC1Q4ADV7 1423 aa7.36□□□□□ -1.23
SBDSP1-204ENST00000453858 LAMB1P07942 1786 aa7.36□□□□□ -1.23
SBDSP1-204ENST00000453858 RTL9Q8NET4 1388 aa7.36□□□□□ -1.23
SBDSP1-204ENST00000453858 CCNYL3P0C7X3 344 aa7.36□□□□□ -1.23
SBDSP1-204ENST00000453858 ZBTB48P10074 688 aaPredicted RBP7.36□□□□□ -1.23
SBDSP1-204ENST00000453858 SYN1P17600 705 aa7.36□□□□□ -1.23
SBDSP1-204ENST00000453858 NHLH1Q02575 133 aa7.36□□□□□ -1.23
SBDSP1-204ENST00000453858 AMOTQ4VCS5 1084 aa7.36□□□□□ -1.23
SBDSP1-204ENST00000453858 TMEM31Q5JXX7 168 aa7.36□□□□□ -1.23
SBDSP1-204ENST00000453858 Q6ZNB5 142 aa7.36□□□□□ -1.23
SBDSP1-204ENST00000453858 SUPT20HQ8NEM7 779 aa7.36□□□□□ -1.23
SBDSP1-204ENST00000453858 ZNF496Q96IT1 587 aaPredicted RBP7.36□□□□□ -1.23
SBDSP1-204ENST00000453858 NECAB3Q96P71 396 aaPredicted RBP7.36□□□□□ -1.23
SBDSP1-204ENST00000453858 RNF208Q9H0X6 261 aa7.36□□□□□ -1.23
SBDSP1-204ENST00000453858 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.36□□□□□ -1.23
SBDSP1-204ENST00000453858 NDUFB9Q9Y6M9 179 aa7.36□□□□□ -1.23
SBDSP1-204ENST00000453858 TCERG1O14776 1098 aaKnown RBP7.35□□□□□ -1.23
SBDSP1-204ENST00000453858 TLL1O43897 1013 aa7.35□□□□□ -1.23
SBDSP1-204ENST00000453858 KRT37O76014 449 aa7.35□□□□□ -1.23
SBDSP1-204ENST00000453858 A1BGP04217 495 aa7.35□□□□□ -1.23
SBDSP1-204ENST00000453858 FOSL2P15408 326 aa7.35□□□□□ -1.23
SBDSP1-204ENST00000453858 CTGFP29279 349 aa7.35□□□□□ -1.23
SBDSP1-204ENST00000453858 PRMT2P55345 433 aa7.35□□□□□ -1.23
SBDSP1-204ENST00000453858 TCIRG1Q13488 830 aa7.35□□□□□ -1.23
SBDSP1-204ENST00000453858 C7orf61Q8IZ16 206 aa7.35□□□□□ -1.23
SBDSP1-204ENST00000453858 PAWRQ96IZ0 340 aaKnown RBP7.35□□□□□ -1.23
SBDSP1-204ENST00000453858 NUDT12Q9BQG2 462 aa7.35□□□□□ -1.23
SBDSP1-204ENST00000453858 PRKD2Q9BZL6 878 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms