RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 LDHBP07195 334 aaKnown RBP9.16□□□□□ -0.94
AC004540.1-206ENST00000448056 USP17L8P0C7I0 530 aa9.16□□□□□ -0.94
AC004540.1-206ENST00000448056 PRDX5P30044 214 aa9.16□□□□□ -0.94
AC004540.1-206ENST00000448056 RGS3P49796 1198 aa9.16□□□□□ -0.94
AC004540.1-206ENST00000448056 MMP14P50281 582 aa9.16□□□□□ -0.94
AC004540.1-206ENST00000448056 TMEM92Q6UXU6 159 aa9.16□□□□□ -0.94
AC004540.1-206ENST00000448056 ERICH6Q7L0X2 663 aa9.16□□□□□ -0.94
AC004540.1-206ENST00000448056 KIAA0825Q8IV33 1275 aa9.16□□□□□ -0.94
AC004540.1-206ENST00000448056 MRIQ9BWK5 157 aa9.16□□□□□ -0.94
AC004540.1-206ENST00000448056 CNOT7Q9UIV1 285 aaKnown RBP9.16□□□□□ -0.94
AC004540.1-206ENST00000448056 CCDC88AQ3V6T2 1871 aa9.16□□□□□ -0.94
AC004540.1-206ENST00000448056 CHD4Q14839 1912 aa9.15□□□□□ -0.94
AC004540.1-206ENST00000448056 F8W031 263 aaPredicted RBP9.15□□□□□ -0.94
AC004540.1-206ENST00000448056 SCNN1DP51172 638 aa9.15□□□□□ -0.94
AC004540.1-206ENST00000448056 ZNF280AP59817 542 aaPredicted RBP9.15□□□□□ -0.94
AC004540.1-206ENST00000448056 MECOMQ03112 1051 aa9.15□□□□□ -0.94
AC004540.1-206ENST00000448056 MAP3K12Q12852 859 aa9.15□□□□□ -0.94
AC004540.1-206ENST00000448056 TTC22Q5TAA0 569 aa9.15□□□□□ -0.94
AC004540.1-206ENST00000448056 OGFOD1Q8N543 542 aa9.15□□□□□ -0.94
AC004540.1-206ENST00000448056 EVI5LQ96CN4 794 aa9.15□□□□□ -0.94
AC004540.1-206ENST00000448056 GPRC5DQ9NZD1 345 aa9.15□□□□□ -0.94
AC004540.1-206ENST00000448056 RAI14Q9P0K7 980 aa9.15□□□□□ -0.94
AC004540.1-206ENST00000448056 TTF2Q9UNY4 1162 aaKnown RBP9.15□□□□□ -0.94
AC004540.1-206ENST00000448056 SCN9AQ15858 1988 aa9.15□□□□□ -0.95
AC004540.1-206ENST00000448056 DICER1Q9UPY3 1922 aaKnown RBP9.15□□□□□ -0.95
AC004540.1-206ENST00000448056 SHTN1A0MZ66 631 aa9.14□□□□□ -0.95
AC004540.1-206ENST00000448056 TRIM6-TRIM34B2RNG4 842 aa9.14□□□□□ -0.95
AC004540.1-206ENST00000448056 POTECB2RU33 542 aa9.14□□□□□ -0.95
AC004540.1-206ENST00000448056 H7C1D1 291 aa9.14□□□□□ -0.95
AC004540.1-206ENST00000448056 IDH1O75874 414 aaKnown RBP9.14□□□□□ -0.95
AC004540.1-206ENST00000448056 GSPT1P15170 499 aaKnown RBP9.14□□□□□ -0.95
AC004540.1-206ENST00000448056 EPS15P42566 896 aa9.14□□□□□ -0.95
AC004540.1-206ENST00000448056 HDLBPQ00341 1268 aaKnown RBP9.14□□□□□ -0.95
AC004540.1-206ENST00000448056 SLC9C2Q5TAH2 1124 aa9.14□□□□□ -0.95
AC004540.1-206ENST00000448056 DZIP1Q86YF9 867 aaKnown RBP9.14□□□□□ -0.95
AC004540.1-206ENST00000448056 KBTBD3Q8NAB2 608 aa9.14□□□□□ -0.95
AC004540.1-206ENST00000448056 ZNF384Q8TF68 577 aa9.14□□□□□ -0.95
AC004540.1-206ENST00000448056 RILPL2Q969X0 211 aa9.14□□□□□ -0.95
AC004540.1-206ENST00000448056 NSUN4Q96CB9 384 aaKnown RBP9.14□□□□□ -0.95
AC004540.1-206ENST00000448056 FAM163AQ96GL9 167 aaPredicted RBP9.14□□□□□ -0.95
AC004540.1-206ENST00000448056 SERPINA10Q9UK55 444 aa9.14□□□□□ -0.95
AC004540.1-206ENST00000448056 HDAC9Q9UKV0 1011 aa9.14□□□□□ -0.95
AC004540.1-206ENST00000448056 MAST3O60307 1309 aa9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 C2orf72A6NCS6 295 aa9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 PDE6AP16499 860 aa9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 SDSP20132 328 aa9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 LMOD1P29536 600 aaPredicted RBP9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 CRKP46108 304 aa9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 GSTO1P78417 241 aa9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 DIXDC1Q155Q3 683 aa9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 NAA16Q6N069 864 aaPredicted RBP9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 TMED8Q6PL24 325 aaPredicted RBP9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 HHIPL2Q6UWX4 724 aa9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 TICAM2Q86XR7 235 aa9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 SLF2Q8IX21 1173 aa9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 CNTROBQ8N137 903 aa9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 MAGEB6Q8N7X4 407 aa9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 TMC2Q8TDI7 906 aa9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 TEKT1Q969V4 418 aa9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 DDX27Q96GQ7 796 aaKnown RBP9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 RRAGCQ9HB90 399 aa9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 MYOZ2Q9NPC6 264 aa9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 HACL1Q9UJ83 578 aa9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 AKAP11Q9UKA4 1901 aa9.13□□□□□ -0.95
AC004540.1-206ENST00000448056 TCRBV5S4A2TA0A5A2 114 aa9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 IQCA1LA6NCM1 817 aa9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 RNF113AO15541 343 aaKnown RBP9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 LDHCP07864 332 aa9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 VEGFAP15692 232 aaPredicted RBP9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 CYP7A1P22680 504 aa9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 ADD2P35612 726 aa9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 RBM5P52756 815 aaKnown RBP eCLIP9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 FOXK1P85037 733 aa9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 UBE3CQ15386 1083 aa9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 DLGAP5Q15398 846 aa9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 LRRFIP1Q32MZ4 808 aaKnown RBP9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 CFAP100Q494V2 611 aa9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 SLFNL1Q499Z3 407 aa9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 BMP2KLQ5H9B9 411 aa9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 RBM26Q5T8P6 1007 aaKnown RBP9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 ZSCAN25Q6NSZ9 544 aa9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 APOBEC3HQ6NTF7 200 aaKnown RBP9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 SAMD7Q7Z3H4 446 aa9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 MTMR14Q8NCE2 650 aa9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 ZNF526Q8TF50 670 aaPredicted RBP9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 PRMT6Q96LA8 375 aaPredicted RBP9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 ZDHHC15Q96MV8 337 aa9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 FSD1Q9BTV5 496 aa9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 ADARB2Q9NS39 739 aaKnown RBP9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 PCDHAC2Q9Y5I4 1007 aa9.12□□□□□ -0.95
AC004540.1-206ENST00000448056 ZNF532Q9HCE3 1301 aa9.11□□□□□ -0.95
AC004540.1-206ENST00000448056 GPR75-ASB3A0A0A6YYF3 556 aa9.11□□□□□ -0.95
AC004540.1-206ENST00000448056 EGFRP00533 1210 aa9.11□□□□□ -0.95
AC004540.1-206ENST00000448056 CHGBP05060 677 aa9.11□□□□□ -0.95
AC004540.1-206ENST00000448056 ZFYP08048 801 aaPredicted RBP9.11□□□□□ -0.95
AC004540.1-206ENST00000448056 EPHX2P34913 555 aa9.11□□□□□ -0.95
AC004540.1-206ENST00000448056 HIRAP54198 1017 aaPredicted RBP9.11□□□□□ -0.95
AC004540.1-206ENST00000448056 DSG2Q14126 1118 aa9.11□□□□□ -0.95
AC004540.1-206ENST00000448056 TBC1D10BQ4KMP7 808 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms