RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 CACTINQ8WUQ7 758 aaKnown RBP13.35□□□□□ -0.27
GNE-203ENST00000447283 DNAJC2Q99543 621 aaKnown RBP13.35□□□□□ -0.27
GNE-203ENST00000447283 PAXBP1Q9Y5B6 917 aa13.35□□□□□ -0.27
GNE-203ENST00000447283 MROH5Q6ZUA9 1318 aa13.35□□□□□ -0.27
GNE-203ENST00000447283 GOLGA6L19H0YKK7 550 aa13.35□□□□□ -0.27
GNE-203ENST00000447283 CTDNEP1O95476 244 aa13.35□□□□□ -0.27
GNE-203ENST00000447283 CCDC144BQ3MJ40 725 aa13.35□□□□□ -0.27
GNE-203ENST00000447283 MSL1Q68DK7 614 aa13.35□□□□□ -0.27
GNE-203ENST00000447283 CCDC144CPQ8IYA2 1237 aa13.35□□□□□ -0.27
GNE-203ENST00000447283 C16orf45Q96MC5 204 aaPredicted RBP13.35□□□□□ -0.27
GNE-203ENST00000447283 DSCC1Q9BVC3 393 aa13.35□□□□□ -0.27
GNE-203ENST00000447283 HELLSQ9NRZ9 838 aa13.35□□□□□ -0.27
GNE-203ENST00000447283 NDUFB9Q9Y6M9 179 aa13.35□□□□□ -0.27
GNE-203ENST00000447283 A0A1B0GUL7 405 aa13.34□□□□□ -0.27
GNE-203ENST00000447283 PDE8BO95263 885 aa13.34□□□□□ -0.27
GNE-203ENST00000447283 CHGBP05060 677 aa13.34□□□□□ -0.27
GNE-203ENST00000447283 TNNT1P13805 278 aa13.34□□□□□ -0.27
GNE-203ENST00000447283 RPS8P62241 208 aaKnown RBP13.34□□□□□ -0.27
GNE-203ENST00000447283 EXOSC10Q01780 885 aaKnown RBP13.34□□□□□ -0.27
GNE-203ENST00000447283 C11orf57Q6ZUT1 292 aaPredicted RBP13.34□□□□□ -0.27
GNE-203ENST00000447283 CCAR1Q8IX12 1150 aaKnown RBP13.34□□□□□ -0.27
GNE-203ENST00000447283 BSDC1Q9NW68 430 aaPredicted RBP13.34□□□□□ -0.27
GNE-203ENST00000447283 SALL1Q9NSC2 1324 aa13.34□□□□□ -0.27
GNE-203ENST00000447283 LAMB2P55268 1798 aa13.34□□□□□ -0.27
GNE-203ENST00000447283 PTPDC1A2A3K4 754 aa13.34□□□□□ -0.27
GNE-203ENST00000447283 FGD1P98174 961 aa13.34□□□□□ -0.27
GNE-203ENST00000447283 NCBP1Q09161 790 aaKnown RBP13.34□□□□□ -0.27
GNE-203ENST00000447283 SNW1Q13573 536 aaKnown RBP13.34□□□□□ -0.27
GNE-203ENST00000447283 LRRC8AQ8IWT6 810 aa13.34□□□□□ -0.27
GNE-203ENST00000447283 ENGASEQ8NFI3 743 aa13.34□□□□□ -0.27
GNE-203ENST00000447283 CELF1Q92879 486 aaKnown RBP13.34□□□□□ -0.27
GNE-203ENST00000447283 ZNF396Q96N95 335 aaPredicted RBP13.34□□□□□ -0.27
GNE-203ENST00000447283 LRRC2Q9BYS8 371 aa13.34□□□□□ -0.27
GNE-203ENST00000447283 RIC1Q4ADV7 1423 aa13.33□□□□□ -0.28
GNE-203ENST00000447283 SPEF2Q9C093 1822 aa13.33□□□□□ -0.28
GNE-203ENST00000447283 CCDC73Q6ZRK6 1079 aa13.33□□□□□ -0.28
GNE-203ENST00000447283 VGLL2Q8N8G2 317 aa13.33□□□□□ -0.28
GNE-203ENST00000447283 UPF1Q92900 1129 aaKnown RBP eCLIP13.33□□□□□ -0.28
GNE-203ENST00000447283 BRIP1Q9BX63 1249 aa13.33□□□□□ -0.28
GNE-203ENST00000447283 GOLPH3LQ9H4A5 285 aa13.33□□□□□ -0.28
GNE-203ENST00000447283 PRDM10Q9NQV6 1147 aa13.33□□□□□ -0.28
GNE-203ENST00000447283 CBX1P83916 185 aa13.32□□□□□ -0.28
GNE-203ENST00000447283 FAM160A1Q05DH4 1040 aa13.32□□□□□ -0.28
GNE-203ENST00000447283 CRY2Q49AN0 593 aa13.32□□□□□ -0.28
GNE-203ENST00000447283 RPGRQ92834 1020 aaKnown RBP13.32□□□□□ -0.28
GNE-203ENST00000447283 CHMP4CQ96CF2 233 aa13.32□□□□□ -0.28
GNE-203ENST00000447283 FEZ1Q99689 392 aa13.32□□□□□ -0.28
GNE-203ENST00000447283 KLRG2A4D1S0 409 aaPredicted RBP13.32□□□□□ -0.28
GNE-203ENST00000447283 APOBRQ0VD83 1088 aa13.32□□□□□ -0.28
GNE-203ENST00000447283 ZMYM1Q5SVZ6 1142 aa13.32□□□□□ -0.28
GNE-203ENST00000447283 HELBQ8NG08 1087 aaPredicted RBP13.32□□□□□ -0.28
GNE-203ENST00000447283 SLC16A10Q8TF71 515 aa13.32□□□□□ -0.28
GNE-203ENST00000447283 USP28Q96RU2 1077 aa13.32□□□□□ -0.28
GNE-203ENST00000447283 ANO10Q9NW15 660 aa13.32□□□□□ -0.28
GNE-203ENST00000447283 KINO60870 393 aaKnown RBP13.31□□□□□ -0.28
GNE-203ENST00000447283 CEBPZQ03701 1054 aaKnown RBP13.31□□□□□ -0.28
GNE-203ENST00000447283 CHRNDQ07001 517 aa13.31□□□□□ -0.28
GNE-203ENST00000447283 TPD52L1Q16890 204 aaPredicted RBP13.31□□□□□ -0.28
GNE-203ENST00000447283 GORABQ5T7V8 394 aa13.31□□□□□ -0.28
GNE-203ENST00000447283 DHX40Q8IX18 779 aaKnown RBP13.31□□□□□ -0.28
GNE-203ENST00000447283 ZNF274Q96GC6 653 aaPredicted RBP13.31□□□□□ -0.28
GNE-203ENST00000447283 GTPBP4Q9BZE4 634 aaKnown RBP13.31□□□□□ -0.28
GNE-203ENST00000447283 FTOQ9C0B1 505 aaKnown RBP eCLIP13.31□□□□□ -0.28
GNE-203ENST00000447283 PDGFDQ9GZP0 370 aaPredicted RBP13.31□□□□□ -0.28
GNE-203ENST00000447283 PAG1Q9NWQ8 432 aa13.31□□□□□ -0.28
GNE-203ENST00000447283 GRAPQ13588 217 aa13.31□□□□□ -0.28
GNE-203ENST00000447283 PUM3Q15397 648 aaKnown RBP13.31□□□□□ -0.28
GNE-203ENST00000447283 CCDC158Q5M9N0 1113 aa13.31□□□□□ -0.28
GNE-203ENST00000447283 FBXL16Q8N461 479 aa13.31□□□□□ -0.28
GNE-203ENST00000447283 CCDC112Q8NEF3 446 aa13.31□□□□□ -0.28
GNE-203ENST00000447283 GRAPLQ8TC17 118 aaPredicted RBP13.31□□□□□ -0.28
GNE-203ENST00000447283 LPIN2Q92539 896 aa13.31□□□□□ -0.28
GNE-203ENST00000447283 XAGE2Q96GT9 111 aa13.31□□□□□ -0.28
GNE-203ENST00000447283 RBM17Q96I25 401 aaKnown RBP13.31□□□□□ -0.28
GNE-203ENST00000447283 MINPP1Q9UNW1 487 aa13.31□□□□□ -0.28
GNE-203ENST00000447283 E7EWF7 191 aa13.3□□□□□ -0.28
GNE-203ENST00000447283 KCND1Q9NSA2 647 aa13.3□□□□□ -0.28
GNE-203ENST00000447283 BECN2A8MW95 431 aa13.3□□□□□ -0.28
GNE-203ENST00000447283 GOLIM4O00461 696 aa13.3□□□□□ -0.28
GNE-203ENST00000447283 HSPD1P10809 573 aaKnown RBP13.3□□□□□ -0.28
GNE-203ENST00000447283 FGFR2P21802 821 aa13.3□□□□□ -0.28
GNE-203ENST00000447283 U2AF2P26368 475 aaKnown RBP eCLIP13.3□□□□□ -0.28
GNE-203ENST00000447283 PDIA3P30101 505 aaKnown RBP13.3□□□□□ -0.28
GNE-203ENST00000447283 HOXA10P31260 410 aaPredicted RBP13.3□□□□□ -0.28
GNE-203ENST00000447283 PDE6BP35913 854 aa13.3□□□□□ -0.28
GNE-203ENST00000447283 EVCP57679 992 aa13.3□□□□□ -0.28
GNE-203ENST00000447283 CEP135Q66GS9 1140 aa13.3□□□□□ -0.28
GNE-203ENST00000447283 CEP57L1Q8IYX8 460 aa13.3□□□□□ -0.28
GNE-203ENST00000447283 CCT2P78371 535 aaKnown RBP13.29□□□□□ -0.28
GNE-203ENST00000447283 NYAP1Q6ZVC0 841 aa13.29□□□□□ -0.28
GNE-203ENST00000447283 FSIP1Q8NA03 581 aa13.29□□□□□ -0.28
GNE-203ENST00000447283 RTEL1Q9NZ71 1219 aa13.29□□□□□ -0.28
GNE-203ENST00000447283 LRP5O75197 1615 aa13.29□□□□□ -0.28
GNE-203ENST00000447283 QSER1Q2KHR3 1735 aa13.28□□□□□ -0.28
GNE-203ENST00000447283 A0A1W2PQ27 194 aa13.28□□□□□ -0.28
GNE-203ENST00000447283 A0A1W2PQ64 194 aa13.28□□□□□ -0.28
GNE-203ENST00000447283 A0A1W2PQD8 194 aa13.28□□□□□ -0.28
GNE-203ENST00000447283 BBOX1O75936 387 aa13.28□□□□□ -0.28
GNE-203ENST00000447283 IFIT1P09914 478 aaKnown RBP13.28□□□□□ -0.28
GNE-203ENST00000447283 SKILP12757 684 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms