RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 AKAP11Q9UKA4 1901 aa20.91■□□□□ 0.94
LIME1-202ENST00000444951 FAM205AQ6ZU69 1335 aa20.9■□□□□ 0.94
LIME1-202ENST00000444951 MYO3BQ8WXR4 1341 aa20.9■□□□□ 0.94
LIME1-202ENST00000444951 TRIM6-TRIM34B2RNG4 842 aa20.9■□□□□ 0.94
LIME1-202ENST00000444951 CYP2E1P05181 493 aaPredicted RBP20.9■□□□□ 0.94
LIME1-202ENST00000444951 KIAA0825Q8IV33 1275 aa20.9■□□□□ 0.94
LIME1-202ENST00000444951 WDR66Q8TBY9 1149 aa20.9■□□□□ 0.94
LIME1-202ENST00000444951 CSRNP1Q96S65 589 aa20.9■□□□□ 0.94
LIME1-202ENST00000444951 ANTXR1Q9H6X2 564 aa20.9■□□□□ 0.94
LIME1-202ENST00000444951 PAG1Q9NWQ8 432 aa20.9■□□□□ 0.94
LIME1-202ENST00000444951 RNF186Q9NXI6 227 aa20.9■□□□□ 0.94
LIME1-202ENST00000444951 CCDC85CA6NKD9 419 aa20.89■□□□□ 0.93
LIME1-202ENST00000444951 F8W031 263 aaPredicted RBP20.89■□□□□ 0.93
LIME1-202ENST00000444951 UBE2Q2LH0YL09 131 aa20.89■□□□□ 0.93
LIME1-202ENST00000444951 MFSD14BQ5SR56 506 aa20.89■□□□□ 0.93
LIME1-202ENST00000444951 TTC22Q5TAA0 569 aa20.89■□□□□ 0.93
LIME1-202ENST00000444951 CERS5Q8N5B7 392 aa20.89■□□□□ 0.93
LIME1-202ENST00000444951 RILPL2Q969X0 211 aa20.89■□□□□ 0.93
LIME1-202ENST00000444951 PIH1D3Q9NQM4 214 aaKnown RBP20.89■□□□□ 0.93
LIME1-202ENST00000444951 TRPA1O75762 1119 aa20.88■□□□□ 0.93
LIME1-202ENST00000444951 OGFOD1Q8N543 542 aa20.88■□□□□ 0.93
LIME1-202ENST00000444951 ZBED3Q96IU2 234 aaPredicted RBP20.88■□□□□ 0.93
LIME1-202ENST00000444951 LRP2BPQ9P2M1 347 aa20.88■□□□□ 0.93
LIME1-202ENST00000444951 PCDHAC2Q9Y5I4 1007 aa20.88■□□□□ 0.93
LIME1-202ENST00000444951 FKBP1BP68106 108 aa20.87■□□□□ 0.93
LIME1-202ENST00000444951 DGKZQ13574 1117 aa20.87■□□□□ 0.93
LIME1-202ENST00000444951 GRIK5Q16478 980 aa20.87■□□□□ 0.93
LIME1-202ENST00000444951 TBC1D22AQ8WUA7 517 aa20.87■□□□□ 0.93
LIME1-202ENST00000444951 SAGE1Q9NXZ1 904 aa20.87■□□□□ 0.93
LIME1-202ENST00000444951 RAI14Q9P0K7 980 aa20.87■□□□□ 0.93
LIME1-202ENST00000444951 PDS5AQ29RF7 1337 aaKnown RBP20.86■□□□□ 0.93
LIME1-202ENST00000444951 IDH1O75874 414 aaKnown RBP20.86■□□□□ 0.93
LIME1-202ENST00000444951 GSPT1P15170 499 aaKnown RBP20.86■□□□□ 0.93
LIME1-202ENST00000444951 LDHBP07195 334 aaKnown RBP20.85■□□□□ 0.93
LIME1-202ENST00000444951 PRDX5P30044 214 aa20.85■□□□□ 0.93
LIME1-202ENST00000444951 TTF1Q15361 905 aaPredicted RBP20.85■□□□□ 0.93
LIME1-202ENST00000444951 ERICH6Q7L0X2 663 aa20.85■□□□□ 0.93
LIME1-202ENST00000444951 ZGPATQ8N5A5 531 aaKnown RBP20.85■□□□□ 0.93
LIME1-202ENST00000444951 FSD1Q9BTV5 496 aa20.85■□□□□ 0.93
LIME1-202ENST00000444951 SPTY2D1Q68D10 685 aaPredicted RBP20.84■□□□□ 0.93
LIME1-202ENST00000444951 SALL1Q9NSC2 1324 aa20.83■□□□□ 0.93
LIME1-202ENST00000444951 SDSP20132 328 aa20.83■□□□□ 0.93
LIME1-202ENST00000444951 DZIP1Q86YF9 867 aaKnown RBP20.83■□□□□ 0.93
LIME1-202ENST00000444951 EVI5LQ96CN4 794 aa20.83■□□□□ 0.93
LIME1-202ENST00000444951 TTF2Q9UNY4 1162 aaKnown RBP20.83■□□□□ 0.93
LIME1-202ENST00000444951 FZD1Q9UP38 647 aa20.83■□□□□ 0.93
LIME1-202ENST00000444951 ZBTB22O15209 634 aa20.82■□□□□ 0.92
LIME1-202ENST00000444951 PRKG1Q13976 671 aa20.82■□□□□ 0.92
LIME1-202ENST00000444951 TTLL12Q14166 644 aaPredicted RBP20.82■□□□□ 0.92
LIME1-202ENST00000444951 HDAC9Q9UKV0 1011 aa20.82■□□□□ 0.92
LIME1-202ENST00000444951 ECM29Q5VYK3 1845 aa20.82■□□□□ 0.92
LIME1-202ENST00000444951 MYO5AQ9Y4I1 1855 aaKnown RBP20.81■□□□□ 0.92
LIME1-202ENST00000444951 FKBP1AP62942 108 aaKnown RBP20.81■□□□□ 0.92
LIME1-202ENST00000444951 MECOMQ03112 1051 aa20.81■□□□□ 0.92
LIME1-202ENST00000444951 MAP3K12Q12852 859 aa20.81■□□□□ 0.92
LIME1-202ENST00000444951 MKRN3Q13064 507 aaKnown RBP20.81■□□□□ 0.92
LIME1-202ENST00000444951 APOBEC3FQ8IUX4 373 aaKnown RBP20.81■□□□□ 0.92
LIME1-202ENST00000444951 KBTBD3Q8NAB2 608 aa20.81■□□□□ 0.92
LIME1-202ENST00000444951 SSC5DA1L4H1 1573 aa20.8■□□□□ 0.92
LIME1-202ENST00000444951 CHGBP05060 677 aa20.8■□□□□ 0.92
LIME1-202ENST00000444951 DIXDC1Q155Q3 683 aa20.8■□□□□ 0.92
LIME1-202ENST00000444951 SLFNL1Q499Z3 407 aa20.8■□□□□ 0.92
LIME1-202ENST00000444951 SLC9C2Q5TAH2 1124 aa20.8■□□□□ 0.92
LIME1-202ENST00000444951 MAGEB6Q8N7X4 407 aa20.8■□□□□ 0.92
LIME1-202ENST00000444951 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.8■□□□□ 0.923e-7■■■■■ 30.8
LIME1-202ENST00000444951 MMP14P50281 582 aa20.79■□□□□ 0.92
LIME1-202ENST00000444951 RBM5P52756 815 aaKnown RBP eCLIP20.79■□□□□ 0.92
LIME1-202ENST00000444951 DLGAP5Q15398 846 aa20.79■□□□□ 0.92
LIME1-202ENST00000444951 NAA16Q6N069 864 aaPredicted RBP20.79■□□□□ 0.92
LIME1-202ENST00000444951 MTMR14Q8NCE2 650 aa20.79■□□□□ 0.92
LIME1-202ENST00000444951 CLRN2A0PK11 232 aa20.78■□□□□ 0.92
LIME1-202ENST00000444951 PDE6AP16499 860 aa20.78■□□□□ 0.92
LIME1-202ENST00000444951 RGS19P49795 217 aa20.78■□□□□ 0.92
LIME1-202ENST00000444951 CFAP100Q494V2 611 aa20.78■□□□□ 0.92
LIME1-202ENST00000444951 BMP2KLQ5H9B9 411 aa20.78■□□□□ 0.92
LIME1-202ENST00000444951 NSUN4Q96CB9 384 aaKnown RBP20.78■□□□□ 0.92
LIME1-202ENST00000444951 SUGT1Q9Y2Z0 365 aa20.78■□□□□ 0.92
LIME1-202ENST00000444951 AK9Q5TCS8 1911 aa20.78■□□□□ 0.92
LIME1-202ENST00000444951 DOCK2Q92608 1830 aa20.78■□□□□ 0.92
LIME1-202ENST00000444951 CYP7A1P22680 504 aa20.77■□□□□ 0.92
LIME1-202ENST00000444951 NF2P35240 595 aa20.77■□□□□ 0.92
LIME1-202ENST00000444951 ZSCAN25Q6NSZ9 544 aa20.77■□□□□ 0.92
LIME1-202ENST00000444951 PRMT6Q96LA8 375 aaPredicted RBP20.77■□□□□ 0.92
LIME1-202ENST00000444951 DEFB129Q9H1M3 183 aa20.77■□□□□ 0.92
LIME1-202ENST00000444951 MAST3O60307 1309 aa20.77■□□□□ 0.91
LIME1-202ENST00000444951 ZNF532Q9HCE3 1301 aa20.77■□□□□ 0.91
LIME1-202ENST00000444951 SPDYE2BA6NHP3 402 aa20.76■□□□□ 0.91
LIME1-202ENST00000444951 RNF113AO15541 343 aaKnown RBP20.76■□□□□ 0.91
LIME1-202ENST00000444951 TBC1D8O95759 1140 aa20.76■□□□□ 0.91
LIME1-202ENST00000444951 SPDYE6P0CI01 402 aa20.76■□□□□ 0.91
LIME1-202ENST00000444951 GSTO1P78417 241 aa20.76■□□□□ 0.91
LIME1-202ENST00000444951 LDLRAD1Q5T700 205 aa20.76■□□□□ 0.91
LIME1-202ENST00000444951 REM2Q8IYK8 340 aaPredicted RBP20.76■□□□□ 0.91
LIME1-202ENST00000444951 ZNF384Q8TF68 577 aa20.76■□□□□ 0.91
LIME1-202ENST00000444951 ANGEL1Q9UNK9 670 aaKnown RBP20.76■□□□□ 0.91
LIME1-202ENST00000444951 MAST2Q6P0Q8 1798 aa20.75■□□□□ 0.91
LIME1-202ENST00000444951 ADD2P35612 726 aa20.75■□□□□ 0.91
LIME1-202ENST00000444951 CRKP46108 304 aa20.75■□□□□ 0.91
LIME1-202ENST00000444951 LRRFIP1Q32MZ4 808 aaKnown RBP20.75■□□□□ 0.91
LIME1-202ENST00000444951 ARMC9Q7Z3E5 817 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms