RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 RBM17Q96I25 401 aaKnown RBP9.07□□□□□ -0.96
RIF1-205ENST00000444746 PGBD1Q96JS3 809 aa9.07□□□□□ -0.96
RIF1-205ENST00000444746 USP44Q9H0E7 712 aa9.07□□□□□ -0.96
RIF1-205ENST00000444746 CBX8Q9HC52 389 aa9.07□□□□□ -0.96
RIF1-205ENST00000444746 GTF3C6Q969F1 213 aa9.07□□□□□ -0.96
RIF1-205ENST00000444746 HGSO14964 777 aaPredicted RBP9.06□□□□□ -0.96
RIF1-205ENST00000444746 ADCK5Q3MIX3 580 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 RDH13Q8NBN7 331 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 METP08581 1390 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 E7EWF7 191 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 FGFR1OPO95684 399 aaKnown RBP9.06□□□□□ -0.96
RIF1-205ENST00000444746 CCDC150Q8NCX0 1101 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 HELLSQ9NRZ9 838 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 GTF2IP78347 998 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 PDE4DQ08499 809 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 BEND3Q5T5X7 828 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 TXLNBQ8N3L3 684 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 GPKOWQ92917 476 aaPredicted RBP eCLIP9.06□□□□□ -0.961e-6■■■□□ 16
RIF1-205ENST00000444746 PUM3Q15397 648 aaKnown RBP9.06□□□□□ -0.96
RIF1-205ENST00000444746 DTHD1Q6ZMT9 781 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 NYXQ9GZU5 481 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 SYNCQ9H7C4 482 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 SEC31BQ9NQW1 1179 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 RRP9O43818 475 aaKnown RBP9.06□□□□□ -0.96
RIF1-205ENST00000444746 FTOQ9C0B1 505 aaKnown RBP eCLIP9.06□□□□□ -0.96
RIF1-205ENST00000444746 TMEM63CQ9P1W3 806 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 TPCN1Q9ULQ1 816 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 UGGT1Q9NYU2 1555 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 DISP1Q96F81 1524 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 SPDYE3A6NKU9 549 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 BACH1O14867 736 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 LRMPQ12912 555 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 CCDC50Q8IVM0 306 aa9.06□□□□□ -0.96
RIF1-205ENST00000444746 PROCA1Q8NCQ7 364 aaPredicted RBP9.06□□□□□ -0.96
RIF1-205ENST00000444746 SH3TC1Q8TE82 1336 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 APBA3O96018 575 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 SERTAD1Q9UHV2 236 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 TRPM2O94759 1503 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 SBNO1A3KN83 1393 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 TCP10L2B9ZVM9 353 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 ADD1P35611 737 aaKnown RBP9.05□□□□□ -0.96
RIF1-205ENST00000444746 UBXN2AP68543 259 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 KRT40Q6A162 431 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 CCDC25Q86WR0 208 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 GDAP1L1Q96MZ0 367 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 TBX22Q9Y458 520 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 ANO1Q5XXA6 986 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 GREM2Q9H772 168 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 ZKSCAN5Q9Y2L8 839 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 MAGI3Q5TCQ9 1506 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 SHTN1A0MZ66 631 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 TLDC2A0PJX2 215 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 SNAP23O00161 211 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 KRT9P35527 623 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 KANK3Q6NY19 840 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 CCDC169A6NNP5 214 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 PSMA7O14818 248 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 PHKG2P15735 406 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 TFAP4Q01664 338 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 FAM114A1Q8IWE2 563 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 USP21Q9UK80 565 aa9.05□□□□□ -0.96
RIF1-205ENST00000444746 DYNLL1P63167 89 aaKnown RBP9.04□□□□□ -0.96
RIF1-205ENST00000444746 USPL1Q5W0Q7 1092 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 SELENOSQ9BQE4 189 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 RMND1Q9NWS8 449 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 GIGYF1O75420 1035 aaPredicted RBP9.04□□□□□ -0.96
RIF1-205ENST00000444746 LRRC47Q8N1G4 583 aaKnown RBP9.04□□□□□ -0.96
RIF1-205ENST00000444746 LEO1Q8WVC0 666 aaPredicted RBP9.04□□□□□ -0.96
RIF1-205ENST00000444746 GGA1Q9UJY5 639 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 DENND2AQ9ULE3 1009 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 RTL9Q8NET4 1388 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 MAGI2Q86UL8 1455 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 NUP160Q12769 1436 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 CTAGE15A4D2H0 777 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 TRAF5O00463 557 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 CTAGE8P0CG41 777 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 SNAP25P60880 206 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 CTAGE6Q86UF2 777 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 CTAGE4Q8IX94 777 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 RASEFQ8IZ41 740 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 TMTC2Q8N394 836 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 LMBRD1Q9NUN5 540 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 RSPH14Q9UHP6 348 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 KRT5P13647 590 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 TRIM31Q9BZY9 425 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 PRKAB2O43741 272 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 SLAIN2Q9P270 581 aa9.04□□□□□ -0.96
RIF1-205ENST00000444746 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.04□□□□□ -0.961e-7■■□□□ 13.1
RIF1-205ENST00000444746 USP17L12C9JPN9 530 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 USP17L21D6R901 530 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 ZNF589Q86UQ0 364 aaPredicted RBP9.03□□□□□ -0.96
RIF1-205ENST00000444746 APPBP2Q92624 585 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 PLEKHF1Q96S99 279 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 KCNH3Q9ULD8 1083 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 IRX5P78411 483 aaPredicted RBP9.03□□□□□ -0.96
RIF1-205ENST00000444746 ERMNQ8TAM6 284 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 IPO4Q8TEX9 1081 aaKnown RBP9.03□□□□□ -0.96
RIF1-205ENST00000444746 CFBP00751 764 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 PHKA1P46020 1223 aa9.03□□□□□ -0.96
RIF1-205ENST00000444746 DPP8Q6V1X1 898 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 390.6 ms