RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 FAM170BA6NMN3 283 aa6.19□□□□□ -1.42
HMGB3P9-201ENST00000441799 PATL2C9JE40 543 aaKnown RBP6.19□□□□□ -1.42
HMGB3P9-201ENST00000441799 RRP9O43818 475 aaKnown RBP6.19□□□□□ -1.42
HMGB3P9-201ENST00000441799 TNFRSF21O75509 655 aa6.19□□□□□ -1.42
HMGB3P9-201ENST00000441799 ITGB5P18084 799 aa6.19□□□□□ -1.42
HMGB3P9-201ENST00000441799 MPSTP25325 297 aa6.19□□□□□ -1.42
HMGB3P9-201ENST00000441799 SOX4Q06945 474 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P9-201ENST00000441799 ZAR1Q86SH2 424 aa6.19□□□□□ -1.42
HMGB3P9-201ENST00000441799 AEBP1Q8IUX7 1158 aa6.19□□□□□ -1.42
HMGB3P9-201ENST00000441799 CCER1Q8TC90 406 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P9-201ENST00000441799 EZH1Q92800 747 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P9-201ENST00000441799 BHLHE41Q9C0J9 482 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P9-201ENST00000441799 POLIQ9UNA4 740 aa6.19□□□□□ -1.42
HMGB3P9-201ENST00000441799 CYP26A1O43174 497 aa6.18□□□□□ -1.42
HMGB3P9-201ENST00000441799 USP11P51784 963 aa6.18□□□□□ -1.42
HMGB3P9-201ENST00000441799 CALD1Q05682 793 aaKnown RBP6.18□□□□□ -1.42
HMGB3P9-201ENST00000441799 FAM50AQ14320 339 aaKnown RBP6.18□□□□□ -1.42
HMGB3P9-201ENST00000441799 VSIG10LQ86VR7 867 aa6.18□□□□□ -1.42
HMGB3P9-201ENST00000441799 ANP32BQ92688 251 aaKnown RBP6.18□□□□□ -1.42
HMGB3P9-201ENST00000441799 SGSM3Q96HU1 749 aa6.18□□□□□ -1.42
HMGB3P9-201ENST00000441799 FBXL18Q96ME1 805 aa6.18□□□□□ -1.42
HMGB3P9-201ENST00000441799 TBC1D32Q96NH3 1257 aa6.18□□□□□ -1.42
HMGB3P9-201ENST00000441799 LATS2Q9NRM7 1088 aa6.18□□□□□ -1.42
HMGB3P9-201ENST00000441799 FOXD3Q9UJU5 478 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P9-201ENST00000441799 TTC36A6NLP5 189 aa6.17□□□□□ -1.42
HMGB3P9-201ENST00000441799 METTL12A8MUP2 240 aa6.17□□□□□ -1.42
HMGB3P9-201ENST00000441799 CTSBP07858 339 aa6.17□□□□□ -1.42
HMGB3P9-201ENST00000441799 PCSK2P16519 638 aa6.17□□□□□ -1.42
HMGB3P9-201ENST00000441799 GSTM4Q03013 218 aa6.17□□□□□ -1.42
HMGB3P9-201ENST00000441799 TP53INP2Q8IXH6 220 aa6.17□□□□□ -1.42
HMGB3P9-201ENST00000441799 POU5F2Q8N7G0 328 aa6.17□□□□□ -1.42
HMGB3P9-201ENST00000441799 ASAP3Q8TDY4 903 aa6.17□□□□□ -1.42
HMGB3P9-201ENST00000441799 METTL22Q9BUU2 404 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P9-201ENST00000441799 GZF1Q9H116 711 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P9-201ENST00000441799 PAK6Q9NQU5 681 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P9-201ENST00000441799 BSDC1Q9NW68 430 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P9-201ENST00000441799 PRDM4Q9UKN5 801 aa6.17□□□□□ -1.42
HMGB3P9-201ENST00000441799 PHACTR2O75167 634 aa6.16□□□□□ -1.42
HMGB3P9-201ENST00000441799 C8AP07357 584 aa6.16□□□□□ -1.42
HMGB3P9-201ENST00000441799 EDN3P14138 238 aa6.16□□□□□ -1.42
HMGB3P9-201ENST00000441799 MTMR3Q13615 1198 aa6.16□□□□□ -1.42
HMGB3P9-201ENST00000441799 TSHZ1Q6ZSZ6 1077 aa6.16□□□□□ -1.42
HMGB3P9-201ENST00000441799 ANKRD13AQ8IZ07 590 aa6.16□□□□□ -1.42
HMGB3P9-201ENST00000441799 GTF3C2Q8WUA4 911 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P9-201ENST00000441799 PBXIP1Q96AQ6 731 aa6.16□□□□□ -1.42
HMGB3P9-201ENST00000441799 TRIM44Q96DX7 344 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P9-201ENST00000441799 CENPJQ9HC77 1338 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P9-201ENST00000441799 ZCCHC6Q5VYS8 1495 aaKnown RBP6.15□□□□□ -1.42
HMGB3P9-201ENST00000441799 NFICP08651 508 aa6.15□□□□□ -1.42
HMGB3P9-201ENST00000441799 ADH5P11766 374 aa6.15□□□□□ -1.42
HMGB3P9-201ENST00000441799 NPR3P17342 541 aa6.15□□□□□ -1.42
HMGB3P9-201ENST00000441799 ZNF423Q2M1K9 1284 aa6.15□□□□□ -1.42
HMGB3P9-201ENST00000441799 NOL8Q76FK4 1167 aaKnown RBP6.15□□□□□ -1.42
HMGB3P9-201ENST00000441799 TTC16Q8NEE8 873 aa6.15□□□□□ -1.42
HMGB3P9-201ENST00000441799 ASIC4Q96FT7 647 aa6.15□□□□□ -1.42
HMGB3P9-201ENST00000441799 MYH16Q9H6N6 1097 aa6.15□□□□□ -1.42
HMGB3P9-201ENST00000441799 ZC3H7BQ9UGR2 993 aaKnown RBP6.15□□□□□ -1.42
HMGB3P9-201ENST00000441799 ACTL7BQ9Y614 415 aa6.15□□□□□ -1.42
HMGB3P9-201ENST00000441799 SCRIBQ14160 1630 aa6.14□□□□□ -1.43
HMGB3P9-201ENST00000441799 SEZ6L2Q6UXD5 910 aa6.14□□□□□ -1.43
HMGB3P9-201ENST00000441799 WFDC3Q8IUB2 231 aa6.14□□□□□ -1.43
HMGB3P9-201ENST00000441799 SNX29Q8TEQ0 813 aa6.14□□□□□ -1.43
HMGB3P9-201ENST00000441799 BRD1O95696 1058 aa6.13□□□□□ -1.43
HMGB3P9-201ENST00000441799 POLR3DP05423 398 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P9-201ENST00000441799 JUNBP17275 347 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P9-201ENST00000441799 MAOBP27338 520 aa6.13□□□□□ -1.43
HMGB3P9-201ENST00000441799 CASC1Q6TDU7 716 aa6.13□□□□□ -1.43
HMGB3P9-201ENST00000441799 KRTAP4-9Q9BYQ8 210 aa6.13□□□□□ -1.43
HMGB3P9-201ENST00000441799 SEMA6CQ9H3T2 930 aa6.13□□□□□ -1.43
HMGB3P9-201ENST00000441799 ACSS3Q9H6R3 686 aa6.13□□□□□ -1.43
HMGB3P9-201ENST00000441799 ZFYVE28Q9HCC9 887 aa6.13□□□□□ -1.43
HMGB3P9-201ENST00000441799 DCAF1Q9Y4B6 1507 aa6.13□□□□□ -1.43
HMGB3P9-201ENST00000441799 DYNC1LI2O43237 492 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 FZD6O60353 706 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 PAPLNO95428 1278 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 ECEL1O95672 775 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 ERCC3P19447 782 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 SPRED3Q2MJR0 410 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 DUSP27Q5VZP5 1158 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 ALKBH2Q6NS38 261 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 RINLQ6ZS11 566 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 ZNF765Q7L2R6 523 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 FAM9BQ8IZU0 186 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 NME8Q8N427 588 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 CCDC82Q8N4S0 544 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 FLCNQ8NFG4 579 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 LRRC4CQ9HCJ2 640 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 C1GALT1Q9NS00 363 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 FAM105AQ9NUU6 356 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 TERF2IPQ9NYB0 399 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 HDAC5Q9UQL6 1122 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 AMOTL2Q9Y2J4 779 aa6.12□□□□□ -1.43
HMGB3P9-201ENST00000441799 A0A096LPE4 126 aa6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 A0A1W2PPZ6 126 aa6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 SSFA2P28290 1259 aa6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 GRIA4P48058 902 aa6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 PCDH1Q08174 1060 aa6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 MYBPC2Q14324 1141 aa6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 SPRED2Q7Z698 418 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms