RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 VEZTQ9HBM0 779 aa21.65■■□□□ 1.06
CCDC188-201ENST00000439765 OTOFQ9HC10 1997 aa21.65■■□□□ 1.06
CCDC188-201ENST00000439765 UBE2Q2LH0YL09 131 aa21.64■■□□□ 1.06
CCDC188-201ENST00000439765 ZBTB22O15209 634 aa21.64■■□□□ 1.06
CCDC188-201ENST00000439765 SNRKQ9NRH2 765 aa21.64■■□□□ 1.06
CCDC188-201ENST00000439765 PPP2R3BQ9Y5P8 575 aa21.64■■□□□ 1.06
CCDC188-201ENST00000439765 SSC5DA1L4H1 1573 aa21.64■■□□□ 1.05
CCDC188-201ENST00000439765 HDLBPQ00341 1268 aaKnown RBP21.64■■□□□ 1.05
CCDC188-201ENST00000439765 DZIP1Q86YF9 867 aaKnown RBP21.64■■□□□ 1.05
CCDC188-201ENST00000439765 DEFB129Q9H1M3 183 aa21.64■■□□□ 1.05
CCDC188-201ENST00000439765 TDRD3Q9H7E2 651 aaKnown RBP21.64■■□□□ 1.05
CCDC188-201ENST00000439765 TTLL12Q14166 644 aaPredicted RBP21.63■■□□□ 1.05
CCDC188-201ENST00000439765 TBC1D9Q6ZT07 1266 aa21.63■■□□□ 1.05
CCDC188-201ENST00000439765 LRRCC1Q9C099 1032 aa21.63■■□□□ 1.05
CCDC188-201ENST00000439765 RNF186Q9NXI6 227 aa21.63■■□□□ 1.05
CCDC188-201ENST00000439765 SMARCA5O60264 1052 aaPredicted RBP21.62■■□□□ 1.05
CCDC188-201ENST00000439765 IFIT2P09913 472 aaKnown RBP21.62■■□□□ 1.05
CCDC188-201ENST00000439765 SPDYE2Q495Y8 402 aa21.62■■□□□ 1.05
CCDC188-201ENST00000439765 ARMC9Q7Z3E5 817 aa21.62■■□□□ 1.05
CCDC188-201ENST00000439765 ZDHHC15Q96MV8 337 aa21.62■■□□□ 1.05
CCDC188-201ENST00000439765 PPP4R2Q9NY27 417 aa21.62■■□□□ 1.05
CCDC188-201ENST00000439765 ZNF70Q9UC06 446 aaPredicted RBP21.62■■□□□ 1.05
CCDC188-201ENST00000439765 DCTPP1Q9H773 170 aa21.61■■□□□ 1.05
CCDC188-201ENST00000439765 DAGLAQ9Y4D2 1042 aa21.61■■□□□ 1.05
CCDC188-201ENST00000439765 TRPA1O75762 1119 aa21.6■■□□□ 1.05
CCDC188-201ENST00000439765 CACNB3P54284 484 aa21.6■■□□□ 1.05
CCDC188-201ENST00000439765 MAP3K11Q16584 847 aa21.6■■□□□ 1.05
CCDC188-201ENST00000439765 LDLRAD1Q5T700 205 aa21.6■■□□□ 1.05
CCDC188-201ENST00000439765 SPTY2D1Q68D10 685 aaPredicted RBP21.6■■□□□ 1.05
CCDC188-201ENST00000439765 HHIPL2Q6UWX4 724 aa21.6■■□□□ 1.05
CCDC188-201ENST00000439765 ERICH6Q7L0X2 663 aa21.6■■□□□ 1.05
CCDC188-201ENST00000439765 ZNF512BQ96KM6 892 aaPredicted RBP21.6■■□□□ 1.05
CCDC188-201ENST00000439765 NDUFB9Q9Y6M9 179 aa21.6■■□□□ 1.05
CCDC188-201ENST00000439765 AK9Q5TCS8 1911 aa21.6■■□□□ 1.05
CCDC188-201ENST00000439765 ZAP70P43403 619 aa21.59■■□□□ 1.05
CCDC188-201ENST00000439765 APOBEC3HQ6NTF7 200 aaKnown RBP21.59■■□□□ 1.05
CCDC188-201ENST00000439765 MYH7P12883 1935 aa21.58■■□□□ 1.05
CCDC188-201ENST00000439765 MECOMQ03112 1051 aa21.58■■□□□ 1.05
CCDC188-201ENST00000439765 MRIQ9BWK5 157 aa21.58■■□□□ 1.05
CCDC188-201ENST00000439765 RAI14Q9P0K7 980 aa21.58■■□□□ 1.05
CCDC188-201ENST00000439765 ANGEL1Q9UNK9 670 aaKnown RBP21.58■■□□□ 1.05
CCDC188-201ENST00000439765 CDK5RAP2Q96SN8 1893 aa21.58■■□□□ 1.05
CCDC188-201ENST00000439765 TCP10L2B9ZVM9 353 aa21.58■■□□□ 1.04
CCDC188-201ENST00000439765 CYP2E1P05181 493 aaPredicted RBP21.58■■□□□ 1.04
CCDC188-201ENST00000439765 TNFAIP1Q13829 316 aa21.58■■□□□ 1.04
CCDC188-201ENST00000439765 LRP2BPQ9P2M1 347 aa21.58■■□□□ 1.04
CCDC188-201ENST00000439765 UNCXA6NJT0 531 aa21.57■■□□□ 1.04
CCDC188-201ENST00000439765 TM4SF4P48230 202 aa21.57■■□□□ 1.04
CCDC188-201ENST00000439765 PRKG1Q13976 671 aa21.57■■□□□ 1.04
CCDC188-201ENST00000439765 SUPT20HL1Q3ZLR7 823 aa21.57■■□□□ 1.04
CCDC188-201ENST00000439765 ZNF384Q8TF68 577 aa21.57■■□□□ 1.04
CCDC188-201ENST00000439765 MCOLN1Q9GZU1 580 aa21.57■■□□□ 1.04
CCDC188-201ENST00000439765 TMOD2Q9NZR1 351 aa21.57■■□□□ 1.04
CCDC188-201ENST00000439765 MROH7-TTC4A0A0A0MT08 1334 aa21.56■■□□□ 1.04
CCDC188-201ENST00000439765 GAKO14976 1311 aa21.56■■□□□ 1.04
CCDC188-201ENST00000439765 PPP1R12BO60237 982 aaPredicted RBP21.56■■□□□ 1.04
CCDC188-201ENST00000439765 RASA3Q14644 834 aa21.56■■□□□ 1.04
CCDC188-201ENST00000439765 PIH1D3Q9NQM4 214 aaKnown RBP21.56■■□□□ 1.04
CCDC188-201ENST00000439765 NSUN4Q96CB9 384 aaKnown RBP21.55■■□□□ 1.04
CCDC188-201ENST00000439765 CCDC136Q96JN2 1154 aa21.55■■□□□ 1.04
CCDC188-201ENST00000439765 FZD1Q9UP38 647 aa21.55■■□□□ 1.04
CCDC188-201ENST00000439765 FOCADQ5VW36 1801 aa21.55■■□□□ 1.04
CCDC188-201ENST00000439765 HDAC1Q13547 482 aaPredicted RBP21.54■■□□□ 1.04
CCDC188-201ENST00000439765 DGKZQ13574 1117 aa21.54■■□□□ 1.04
CCDC188-201ENST00000439765 NBPF12Q5TAG4 269 aaPredicted RBP21.54■■□□□ 1.04
CCDC188-201ENST00000439765 SPRYD7Q5W111 196 aa21.54■■□□□ 1.04
CCDC188-201ENST00000439765 CDC42EP5Q6NZY7 148 aa21.54■■□□□ 1.04
CCDC188-201ENST00000439765 CDAN1Q8IWY9 1227 aa21.54■■□□□ 1.04
CCDC188-201ENST00000439765 SLF2Q8IX21 1173 aa21.54■■□□□ 1.04
CCDC188-201ENST00000439765 TMEM39BQ9GZU3 492 aa21.54■■□□□ 1.04
CCDC188-201ENST00000439765 BTDP43251 543 aa21.53■■□□□ 1.04
CCDC188-201ENST00000439765 TNNI2P48788 182 aa21.53■■□□□ 1.04
CCDC188-201ENST00000439765 SREBF2Q12772 1141 aa21.53■■□□□ 1.04
CCDC188-201ENST00000439765 DNAJC2Q99543 621 aaKnown RBP21.53■■□□□ 1.04
CCDC188-201ENST00000439765 RWDD1Q9H446 243 aaPredicted RBP21.53■■□□□ 1.04
CCDC188-201ENST00000439765 ANTXR1Q9H6X2 564 aa21.53■■□□□ 1.04
CCDC188-201ENST00000439765 IDH1O75874 414 aaKnown RBP21.52■■□□□ 1.04
CCDC188-201ENST00000439765 IGHDP01880 384 aa21.52■■□□□ 1.04
CCDC188-201ENST00000439765 GSTO1P78417 241 aa21.52■■□□□ 1.04
CCDC188-201ENST00000439765 B4GALNT3Q6L9W6 998 aa21.52■■□□□ 1.04
CCDC188-201ENST00000439765 ZBTB48P10074 688 aaPredicted RBP21.52■■□□□ 1.03
CCDC188-201ENST00000439765 NOM1Q5C9Z4 860 aaKnown RBP21.52■■□□□ 1.03
CCDC188-201ENST00000439765 NAA16Q6N069 864 aaPredicted RBP21.52■■□□□ 1.03
CCDC188-201ENST00000439765 CFHR5Q9BXR6 569 aa21.52■■□□□ 1.03
CCDC188-201ENST00000439765 USP40Q9NVE5 1235 aa21.52■■□□□ 1.03
CCDC188-201ENST00000439765 IREB2P48200 963 aaKnown RBP21.51■■□□□ 1.03
CCDC188-201ENST00000439765 TCP10Q12799 353 aa21.51■■□□□ 1.03
CCDC188-201ENST00000439765 NFIAQ12857 509 aa21.51■■□□□ 1.03
CCDC188-201ENST00000439765 MKRN3Q13064 507 aaKnown RBP21.51■■□□□ 1.03
CCDC188-201ENST00000439765 TSHZ3Q63HK5 1081 aa21.51■■□□□ 1.03
CCDC188-201ENST00000439765 FAM163AQ96GL9 167 aaPredicted RBP21.51■■□□□ 1.03
CCDC188-201ENST00000439765 TEPSINQ96N21 525 aa21.51■■□□□ 1.03
CCDC188-201ENST00000439765 BOLA2Q9H3K6 86 aa21.51■■□□□ 1.03
CCDC188-201ENST00000439765 RFX7Q2KHR2 1363 aa21.51■■□□□ 1.03
CCDC188-201ENST00000439765 GOLIM4O00461 696 aa21.5■■□□□ 1.03
CCDC188-201ENST00000439765 USP2O75604 605 aaPredicted RBP21.5■■□□□ 1.03
CCDC188-201ENST00000439765 FKBP1CQ5VVH2 108 aa21.5■■□□□ 1.03
CCDC188-201ENST00000439765 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.5■■□□□ 1.03
CCDC188-201ENST00000439765 SLC10A4Q96EP9 437 aa21.5■■□□□ 1.03
CCDC188-201ENST00000439765 EDC3Q96F86 508 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms