RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 KIF1BPQ96EK5 621 aa30.32■■■□□ 2.44
RAPGEF1-206ENST00000438647 TEPSINQ96N21 525 aa30.32■■■□□ 2.44
RAPGEF1-206ENST00000438647 CCDC8Q9H0W5 538 aaPredicted RBP30.32■■■□□ 2.44
RAPGEF1-206ENST00000438647 GAKO14976 1311 aa30.31■■■□□ 2.44
RAPGEF1-206ENST00000438647 RRP1P56182 461 aaKnown RBP30.31■■■□□ 2.44
RAPGEF1-206ENST00000438647 KIF23Q02241 960 aaPredicted RBP30.31■■■□□ 2.44
RAPGEF1-206ENST00000438647 CDC42EP5Q6NZY7 148 aa30.31■■■□□ 2.44
RAPGEF1-206ENST00000438647 HOOK2Q96ED9 719 aa30.31■■■□□ 2.44
RAPGEF1-206ENST00000438647 FAM163AQ96GL9 167 aaPredicted RBP30.31■■■□□ 2.44
RAPGEF1-206ENST00000438647 ZIC5Q96T25 663 aa30.31■■■□□ 2.44
RAPGEF1-206ENST00000438647 RAB11FIP3O75154 756 aa30.3■■■□□ 2.44
RAPGEF1-206ENST00000438647 GSTO1P78417 241 aa30.3■■■□□ 2.44
RAPGEF1-206ENST00000438647 MECOMQ03112 1051 aa30.29■■■□□ 2.44
RAPGEF1-206ENST00000438647 AACSQ86V21 672 aa30.29■■■□□ 2.44
RAPGEF1-206ENST00000438647 CLASRPQ8N2M8 674 aaKnown RBP30.29■■■□□ 2.44
RAPGEF1-206ENST00000438647 PRDM10Q9NQV6 1147 aa30.29■■■□□ 2.44
RAPGEF1-206ENST00000438647 USP40Q9NVE5 1235 aa30.29■■■□□ 2.44
RAPGEF1-206ENST00000438647 RAI14Q9P0K7 980 aa30.29■■■□□ 2.44
RAPGEF1-206ENST00000438647 FZD1Q9UP38 647 aa30.29■■■□□ 2.44
RAPGEF1-206ENST00000438647 RPAP1Q9BWH6 1393 aaPredicted RBP30.28■■■□□ 2.44
RAPGEF1-206ENST00000438647 MYH2Q9UKX2 1941 aa30.28■■■□□ 2.44
RAPGEF1-206ENST00000438647 LDHCP07864 332 aa30.28■■■□□ 2.44
RAPGEF1-206ENST00000438647 TBC1D9Q6ZT07 1266 aa30.28■■■□□ 2.44
RAPGEF1-206ENST00000438647 TLR7Q9NYK1 1049 aaKnown RBP30.28■■■□□ 2.44
RAPGEF1-206ENST00000438647 LRP2BPQ9P2M1 347 aa30.28■■■□□ 2.44
RAPGEF1-206ENST00000438647 MROH7-TTC4A0A0A0MT08 1334 aa30.27■■■□□ 2.44
RAPGEF1-206ENST00000438647 IGSF3O75054 1194 aa30.27■■■□□ 2.44
RAPGEF1-206ENST00000438647 USP2O75604 605 aaPredicted RBP30.27■■■□□ 2.44
RAPGEF1-206ENST00000438647 HSPA8P11142 646 aaKnown RBP30.27■■■□□ 2.44
RAPGEF1-206ENST00000438647 ANKRD13AQ8IZ07 590 aa30.27■■■□□ 2.44
RAPGEF1-206ENST00000438647 FAM151AQ8WW52 585 aa30.27■■■□□ 2.44
RAPGEF1-206ENST00000438647 SLC10A4Q96EP9 437 aa30.27■■■□□ 2.44
RAPGEF1-206ENST00000438647 IL1RAPL2Q9NP60 686 aa30.27■■■□□ 2.44
RAPGEF1-206ENST00000438647 APBB1O00213 710 aa30.26■■■□□ 2.43
RAPGEF1-206ENST00000438647 CDAN1Q8IWY9 1227 aa30.26■■■□□ 2.43
RAPGEF1-206ENST00000438647 NSUN4Q96CB9 384 aaKnown RBP30.26■■■□□ 2.43
RAPGEF1-206ENST00000438647 SNRKQ9NRH2 765 aa30.26■■■□□ 2.43
RAPGEF1-206ENST00000438647 LBX1P52954 281 aa30.25■■■□□ 2.43
RAPGEF1-206ENST00000438647 COL13A1Q5TAT6 717 aaPredicted RBP30.25■■■□□ 2.43
RAPGEF1-206ENST00000438647 CSRNP1Q96S65 589 aa30.25■■■□□ 2.43
RAPGEF1-206ENST00000438647 BTDP43251 543 aa30.24■■■□□ 2.43
RAPGEF1-206ENST00000438647 GPR75-ASB3A0A0A6YYF3 556 aa30.23■■■□□ 2.43
RAPGEF1-206ENST00000438647 NFIAQ12857 509 aa30.23■■■□□ 2.43
RAPGEF1-206ENST00000438647 DCAF15Q66K64 600 aa30.23■■■□□ 2.43
RAPGEF1-206ENST00000438647 IDI2Q9BXS1 227 aa30.23■■■□□ 2.43
RAPGEF1-206ENST00000438647 SAGE1Q9NXZ1 904 aa30.23■■■□□ 2.43
RAPGEF1-206ENST00000438647 AKAP11Q9UKA4 1901 aa30.22■■■□□ 2.43
RAPGEF1-206ENST00000438647 MAP4K4O95819 1239 aaPredicted RBP30.22■■■□□ 2.43
RAPGEF1-206ENST00000438647 CYP2E1P05181 493 aaPredicted RBP30.22■■■□□ 2.43
RAPGEF1-206ENST00000438647 IFIT2P09913 472 aaKnown RBP30.22■■■□□ 2.43
RAPGEF1-206ENST00000438647 ZAP70P43403 619 aa30.22■■■□□ 2.43
RAPGEF1-206ENST00000438647 TCP10Q12799 353 aa30.22■■■□□ 2.43
RAPGEF1-206ENST00000438647 SPRYD7Q5W111 196 aa30.22■■■□□ 2.43
RAPGEF1-206ENST00000438647 ZBTB48P10074 688 aaPredicted RBP30.21■■■□□ 2.43
RAPGEF1-206ENST00000438647 SREBF2Q12772 1141 aa30.21■■■□□ 2.43
RAPGEF1-206ENST00000438647 ZNF384Q8TF68 577 aa30.21■■■□□ 2.43
RAPGEF1-206ENST00000438647 CLMNQ96JQ2 1002 aa30.21■■■□□ 2.43
RAPGEF1-206ENST00000438647 FAM198AQ9UFP1 575 aa30.21■■■□□ 2.43
RAPGEF1-206ENST00000438647 ENTPD3O75355 529 aa30.2■■■□□ 2.43
RAPGEF1-206ENST00000438647 MKRN3Q13064 507 aaKnown RBP30.2■■■□□ 2.43
RAPGEF1-206ENST00000438647 NAA16Q6N069 864 aaPredicted RBP30.2■■■□□ 2.43
RAPGEF1-206ENST00000438647 NOL10Q9BSC4 688 aaKnown RBP30.2■■■□□ 2.43
RAPGEF1-206ENST00000438647 MAP3K9P80192 1104 aa30.19■■■□□ 2.42
RAPGEF1-206ENST00000438647 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.19■■■□□ 2.42
RAPGEF1-206ENST00000438647 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.19■■■□□ 2.42
RAPGEF1-206ENST00000438647 CSADQ9Y600 493 aa30.19■■■□□ 2.42
RAPGEF1-206ENST00000438647 RGS3P49796 1198 aa30.18■■■□□ 2.42
RAPGEF1-206ENST00000438647 WNK4Q96J92 1243 aa30.18■■■□□ 2.42
RAPGEF1-206ENST00000438647 LRRCC1Q9C099 1032 aa30.18■■■□□ 2.42
RAPGEF1-206ENST00000438647 TSKSQ9UJT2 592 aa30.18■■■□□ 2.42
RAPGEF1-206ENST00000438647 RFX7Q2KHR2 1363 aa30.17■■■□□ 2.42
RAPGEF1-206ENST00000438647 WDHD1O75717 1129 aaPredicted RBP30.17■■■□□ 2.42
RAPGEF1-206ENST00000438647 ZNF341Q9BYN7 854 aa30.17■■■□□ 2.42
RAPGEF1-206ENST00000438647 RNF186Q9NXI6 227 aa30.17■■■□□ 2.42
RAPGEF1-206ENST00000438647 MAST2Q6P0Q8 1798 aa30.16■■■□□ 2.42
RAPGEF1-206ENST00000438647 MANSC4A6NHS7 340 aaPredicted RBP30.16■■■□□ 2.42
RAPGEF1-206ENST00000438647 BAG3O95817 575 aa30.16■■■□□ 2.42
RAPGEF1-206ENST00000438647 TM4SF4P48230 202 aa30.16■■■□□ 2.42
RAPGEF1-206ENST00000438647 RHBDL3P58872 404 aa30.16■■■□□ 2.42
RAPGEF1-206ENST00000438647 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.16■■■□□ 2.42
RAPGEF1-206ENST00000438647 WRNIP1Q96S55 665 aa30.16■■■□□ 2.42
RAPGEF1-206ENST00000438647 NPM3O75607 178 aaKnown RBP30.15■■■□□ 2.42
RAPGEF1-206ENST00000438647 TRPA1O75762 1119 aa30.15■■■□□ 2.42
RAPGEF1-206ENST00000438647 INHBEP58166 350 aa30.15■■■□□ 2.42
RAPGEF1-206ENST00000438647 VGLL4Q14135 290 aa30.15■■■□□ 2.42
RAPGEF1-206ENST00000438647 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.15■■■□□ 2.42
RAPGEF1-206ENST00000438647 BCL11AQ9H165 835 aa30.15■■■□□ 2.42
RAPGEF1-206ENST00000438647 ELP3Q9H9T3 547 aa30.15■■■□□ 2.42
RAPGEF1-206ENST00000438647 PIH1D3Q9NQM4 214 aaKnown RBP30.15■■■□□ 2.42
RAPGEF1-206ENST00000438647 OTOFQ9HC10 1997 aa30.14■■■□□ 2.42
RAPGEF1-206ENST00000438647 IDH1O75874 414 aaKnown RBP30.14■■■□□ 2.42
RAPGEF1-206ENST00000438647 PLCG2P16885 1265 aa30.14■■■□□ 2.42
RAPGEF1-206ENST00000438647 PICALMQ13492 652 aa30.14■■■□□ 2.42
RAPGEF1-206ENST00000438647 TMED8Q6PL24 325 aaPredicted RBP30.14■■■□□ 2.42
RAPGEF1-206ENST00000438647 ZSCAN29Q8IWY8 852 aaPredicted RBP30.14■■■□□ 2.42
RAPGEF1-206ENST00000438647 TNS4Q8IZW8 715 aa30.14■■■□□ 2.42
RAPGEF1-206ENST00000438647 AK9Q5TCS8 1911 aa30.14■■■□□ 2.41
RAPGEF1-206ENST00000438647 TTF1Q15361 905 aaPredicted RBP30.13■■■□□ 2.41
RAPGEF1-206ENST00000438647 MIGA2Q7L4E1 593 aa30.13■■■□□ 2.41
RAPGEF1-206ENST00000438647 OPTNQ96CV9 577 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 337.5 ms