RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 EIF5BO60841 1220 aaKnown RBP22.13■■□□□ 1.13
HDAC6-208ENST00000438518 CHMLP26374 656 aa22.13■■□□□ 1.13
HDAC6-208ENST00000438518 MCMDC2Q4G0Z9 681 aa22.13■■□□□ 1.13
HDAC6-208ENST00000438518 SAMD7Q7Z3H4 446 aa22.13■■□□□ 1.13
HDAC6-208ENST00000438518 ADGRA1Q86SQ6 560 aa22.13■■□□□ 1.13
HDAC6-208ENST00000438518 ZC3H15Q8WU90 426 aaKnown RBP22.13■■□□□ 1.13
HDAC6-208ENST00000438518 RIOK1Q9BRS2 568 aaKnown RBP22.13■■□□□ 1.13
HDAC6-208ENST00000438518 AATFQ9NY61 560 aaKnown RBP eCLIP22.13■■□□□ 1.13
HDAC6-208ENST00000438518 TMOD2Q9NZR1 351 aa22.13■■□□□ 1.13
HDAC6-208ENST00000438518 PITPNM2Q9BZ72 1349 aa22.12■■□□□ 1.13
HDAC6-208ENST00000438518 CDK5RAP2Q96SN8 1893 aa22.12■■□□□ 1.13
HDAC6-208ENST00000438518 POTECB2RU33 542 aa22.12■■□□□ 1.13
HDAC6-208ENST00000438518 GNAT2P19087 354 aa22.12■■□□□ 1.13
HDAC6-208ENST00000438518 TBC1D10BQ4KMP7 808 aaPredicted RBP22.12■■□□□ 1.13
HDAC6-208ENST00000438518 PRMT6Q96LA8 375 aaPredicted RBP22.12■■□□□ 1.13
HDAC6-208ENST00000438518 RPAP1Q9BWH6 1393 aaPredicted RBP22.12■■□□□ 1.13
HDAC6-208ENST00000438518 SHTN1A0MZ66 631 aa22.11■■□□□ 1.13
HDAC6-208ENST00000438518 NMIQ13287 307 aaPredicted RBP22.11■■□□□ 1.13
HDAC6-208ENST00000438518 SPDYE2Q495Y8 402 aa22.11■■□□□ 1.13
HDAC6-208ENST00000438518 FKBP1CQ5VVH2 108 aa22.11■■□□□ 1.13
HDAC6-208ENST00000438518 CWC27Q6UX04 472 aaKnown RBP22.11■■□□□ 1.13
HDAC6-208ENST00000438518 MIGA1Q8NAN2 632 aa22.11■■□□□ 1.13
HDAC6-208ENST00000438518 OSBP2Q969R2 916 aa22.11■■□□□ 1.13
HDAC6-208ENST00000438518 PUS7LQ9H0K6 701 aaKnown RBP22.11■■□□□ 1.13
HDAC6-208ENST00000438518 A0A0D9SFI3 127 aa22.1■■□□□ 1.13
HDAC6-208ENST00000438518 NPM3O75607 178 aaKnown RBP22.1■■□□□ 1.13
HDAC6-208ENST00000438518 MBD4O95243 580 aa22.1■■□□□ 1.13
HDAC6-208ENST00000438518 RHBDL3P58872 404 aa22.1■■□□□ 1.13
HDAC6-208ENST00000438518 TNFAIP1Q13829 316 aa22.1■■□□□ 1.13
HDAC6-208ENST00000438518 RBM26Q5T8P6 1007 aaKnown RBP22.1■■□□□ 1.13
HDAC6-208ENST00000438518 TRPM4Q8TD43 1214 aa22.1■■□□□ 1.13
HDAC6-208ENST00000438518 CRNKL1Q9BZJ0 848 aaKnown RBP22.1■■□□□ 1.13
HDAC6-208ENST00000438518 RRAGCQ9HB90 399 aa22.1■■□□□ 1.13
HDAC6-208ENST00000438518 GPBP1L1Q9HC44 474 aaPredicted RBP22.1■■□□□ 1.13
HDAC6-208ENST00000438518 GPAA1O43292 621 aa22.09■■□□□ 1.13
HDAC6-208ENST00000438518 YY1P25490 414 aa22.09■■□□□ 1.13
HDAC6-208ENST00000438518 NBPF9Q3BBW0 867 aa22.09■■□□□ 1.13
HDAC6-208ENST00000438518 CDC42EP5Q6NZY7 148 aa22.09■■□□□ 1.13
HDAC6-208ENST00000438518 APOBEC3FQ8IUX4 373 aaKnown RBP22.09■■□□□ 1.13
HDAC6-208ENST00000438518 FAM227BQ96M60 508 aa22.09■■□□□ 1.13
HDAC6-208ENST00000438518 IDI2Q9BXS1 227 aa22.09■■□□□ 1.13
HDAC6-208ENST00000438518 USP40Q9NVE5 1235 aa22.09■■□□□ 1.13
HDAC6-208ENST00000438518 CCDC171Q6TFL3 1326 aa22.08■■□□□ 1.13
HDAC6-208ENST00000438518 EGFRP00533 1210 aa22.08■■□□□ 1.13
HDAC6-208ENST00000438518 CHGBP05060 677 aa22.08■■□□□ 1.13
HDAC6-208ENST00000438518 TNNI2P48788 182 aa22.08■■□□□ 1.13
HDAC6-208ENST00000438518 STRBPQ96SI9 672 aaKnown RBP22.08■■□□□ 1.13
HDAC6-208ENST00000438518 TDRD3Q9H7E2 651 aaKnown RBP22.08■■□□□ 1.13
HDAC6-208ENST00000438518 ZNF70Q9UC06 446 aaPredicted RBP22.08■■□□□ 1.13
HDAC6-208ENST00000438518 PGAP2Q9UHJ9 254 aa22.08■■□□□ 1.13
HDAC6-208ENST00000438518 NAV1Q8NEY1 1877 aa22.08■■□□□ 1.13
HDAC6-208ENST00000438518 M0R2C6 588 aa22.07■■□□□ 1.12
HDAC6-208ENST00000438518 HIRAP54198 1017 aaPredicted RBP22.07■■□□□ 1.12
HDAC6-208ENST00000438518 DYNLL1P63167 89 aaKnown RBP22.07■■□□□ 1.12
HDAC6-208ENST00000438518 SLFNL1Q499Z3 407 aa22.07■■□□□ 1.12
HDAC6-208ENST00000438518 FAM83AQ86UY5 434 aa22.07■■□□□ 1.12
HDAC6-208ENST00000438518 TEX11Q8IYF3 940 aa22.07■■□□□ 1.12
HDAC6-208ENST00000438518 LCORLQ8N3X6 602 aa22.07■■□□□ 1.12
HDAC6-208ENST00000438518 DDRGK1Q96HY6 314 aa22.07■■□□□ 1.12
HDAC6-208ENST00000438518 SEC62Q99442 399 aaKnown RBP22.07■■□□□ 1.12
HDAC6-208ENST00000438518 ARMT1Q9H993 441 aa22.07■■□□□ 1.12
HDAC6-208ENST00000438518 ATP8A2Q9NTI2 1148 aa22.07■■□□□ 1.12
HDAC6-208ENST00000438518 PCDHAC2Q9Y5I4 1007 aa22.07■■□□□ 1.12
HDAC6-208ENST00000438518 COL2A1P02458 1487 aaPredicted RBP22.07■■□□□ 1.12
HDAC6-208ENST00000438518 SGSM2O43147 1006 aa22.06■■□□□ 1.12
HDAC6-208ENST00000438518 ENTPD3O75355 529 aa22.06■■□□□ 1.12
HDAC6-208ENST00000438518 GIMAP6Q6P9H5 292 aa22.06■■□□□ 1.12
HDAC6-208ENST00000438518 SH3RF3Q8TEJ3 882 aaPredicted RBP22.06■■□□□ 1.12
HDAC6-208ENST00000438518 ZNF526Q8TF50 670 aaPredicted RBP22.06■■□□□ 1.12
HDAC6-208ENST00000438518 NMRK2Q9NPI5 230 aa22.06■■□□□ 1.12
HDAC6-208ENST00000438518 PPP2R3BQ9Y5P8 575 aa22.06■■□□□ 1.12
HDAC6-208ENST00000438518 DDX60LQ5H9U9 1706 aaKnown RBP22.06■■□□□ 1.12
HDAC6-208ENST00000438518 LDHDQ86WU2 507 aa22.05■■□□□ 1.12
HDAC6-208ENST00000438518 DCPSQ96C86 337 aaKnown RBP22.05■■□□□ 1.12
HDAC6-208ENST00000438518 ESYT1Q9BSJ8 1104 aa22.05■■□□□ 1.12
HDAC6-208ENST00000438518 GGA3Q9NZ52 723 aa22.05■■□□□ 1.12
HDAC6-208ENST00000438518 CLRN2A0PK11 232 aa22.04■■□□□ 1.12
HDAC6-208ENST00000438518 WDHD1O75717 1129 aaPredicted RBP22.04■■□□□ 1.12
HDAC6-208ENST00000438518 USP5P45974 858 aa22.04■■□□□ 1.12
HDAC6-208ENST00000438518 EAPPQ56P03 285 aaPredicted RBP22.04■■□□□ 1.12
HDAC6-208ENST00000438518 ANGEL2Q5VTE6 544 aaKnown RBP22.04■■□□□ 1.12
HDAC6-208ENST00000438518 NACAP1Q9BZK3 213 aa22.04■■□□□ 1.12
HDAC6-208ENST00000438518 SLC4A4Q9Y6R1 1079 aa22.04■■□□□ 1.12
HDAC6-208ENST00000438518 ZMYM6O95789 1325 aa22.04■■□□□ 1.12
HDAC6-208ENST00000438518 PATL2C9JE40 543 aaKnown RBP22.03■■□□□ 1.12
HDAC6-208ENST00000438518 VEZTQ9HBM0 779 aa22.03■■□□□ 1.12
HDAC6-208ENST00000438518 MYH1P12882 1939 aa22.03■■□□□ 1.12
HDAC6-208ENST00000438518 FLT1P17948 1338 aa22.03■■□□□ 1.12
HDAC6-208ENST00000438518 EPB41L2O43491 1005 aaKnown RBP22.02■■□□□ 1.12
HDAC6-208ENST00000438518 KIAA1211Q6ZU35 1233 aa22.02■■□□□ 1.12
HDAC6-208ENST00000438518 ZNF589Q86UQ0 364 aaPredicted RBP22.02■■□□□ 1.12
HDAC6-208ENST00000438518 SULF1Q8IWU6 871 aa22.02■■□□□ 1.12
HDAC6-208ENST00000438518 TGFBRAP1Q8WUH2 860 aa22.02■■□□□ 1.12
HDAC6-208ENST00000438518 FAM151AQ8WW52 585 aa22.02■■□□□ 1.12
HDAC6-208ENST00000438518 DSCC1Q9BVC3 393 aa22.02■■□□□ 1.12
HDAC6-208ENST00000438518 DHX36Q9H2U1 1008 aaKnown RBP22.02■■□□□ 1.12
HDAC6-208ENST00000438518 LAMB1P07942 1786 aa22.02■■□□□ 1.11
HDAC6-208ENST00000438518 ATRNL1Q5VV63 1379 aa22.01■■□□□ 1.11
HDAC6-208ENST00000438518 AMOTL1Q8IY63 956 aa22.01■■□□□ 1.11
HDAC6-208ENST00000438518 OSBPL5Q9H0X9 879 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms